Seriola dumerili (greater amberjack): 111233235
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Entry
111233235 CDS
T05606
Symbol
zbed1
Name
(RefSeq) zinc finger BED domain-containing protein 1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111233235 (zbed1)
04121 Ubiquitin system [BR:
sdu04121
]
111233235 (zbed1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
111233235 (zbed1)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111233235 (zbed1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
111233235
NCBI-ProteinID:
XP_022616727
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MEGKSSGRSCSGLNLVAHPRAKSKVWKYFGFDTDADGCILHWKRIYCRVCMSQIAYSGNT
SNLSYHLEKNHPVEFSEFVKSNTDQMREAFATAFSRIKTEPSGLHGQQQSQDSNIRQSLD
YENRRHNDLTIAIINFICEGLYPVSVVEEHTFKTLMSTVDPGYSPPTKNELAVKMVPQMY
CRARDKVFSDLTGVVNCGVTTDLWQSQTQNRTYISLSMHSVNYNSTTGFSMTNKCLKTFE
VQEENTAENITRAMYETFVEWGITHKVSGATTNGSVDIVKACSLLELSVEMPCLGHTINH
AMDEAFQLPRLDSFLGCCRKLVDHFKEPTMYLLREKQKQHGLTQCELISDRGRSWLATLA
MLQRLKEQQVAVTATLTESSISHHFSFDGSDWTLLEGLIEVLHPFKVVANMITSCRYPAI
SMVRPVLHMLLNTNLKIKEGDIKEISMTKEVISKVLSSTYSQNLPLSQEISTFLNIATFL
DPRYKKLPFLSTQERSKVESNVIEEVKAILEKQMSDQSCLDDFSLLSQEPPSKKQAPLRG
SSASSTTQDNPLAAIFCQSDADQSQEELHAQVVEELSNYKSQRVLGLNEDPLLWWSSHAT
LFPTLPKVLQKYWCVPATSVPCHRLFSSSGTVLCGKRNCIAPALVDQQVFLYENSRSYYE
AEPCEDDLDNVWEGNCTLSQPLE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaaaagctcaggacgttcgtgctctggcctcaatctagtcgcacacccacga
gccaaaagcaaagtctggaaatactttggctttgacacagatgcagatggctgcatattg
cactggaaaaggatatactgtcgcgtttgtatgagtcaaattgcttactccggaaataca
tccaacctgtcgtaccaccttgaaaagaaccatccagtagagttcagtgagtttgtgaag
agcaacacggatcagatgcgtgaggcttttgccacagcattctccaggataaagactgag
ccttcaggtctccatggtcagcaacagtcccaggactcaaacataaggcagagcttagac
tatgaaaacagacgtcacaatgaccttacaatagctatcatcaacttcatctgcgagggg
ctgtaccctgtatctgtagttgaagagcatacctttaagaccttaatgagtactgttgac
cctgggtactctccacccaccaaaaacgaactggctgttaaaatggttcctcagatgtat
tgccgtgcccgggacaaggtctttagcgatcttactggggttgttaactgtggtgttact
acagacctctggcaaagtcaaacccagaacagaacatacatttcactctctatgcattca
gttaattacaatagtacaactggtttctctatgaccaacaagtgcctcaaaacttttgaa
gtacaagaagaaaacacggctgagaatatcaccagagcaatgtatgaaacctttgttgag
tgggggataactcataaagtcagcggtgcaaccacaaatggttcagtagacattgtcaaa
gcatgctcgctcctggaactgtccgtggaaatgccttgccttggacacaccatcaatcac
gcaatggatgaagccttccagctgccgcggctcgacagctttttgggatgctgccgcaaa
cttgttgatcatttcaaagaacctacaatgtatctgctgagagaaaagcagaagcagcat
ggcctcactcagtgtgaactcatctcagacaggggtaggtcttggttggccacattagca
atgttacaaagactgaaagagcaacaggttgctgttactgcaacacttacagagagttcc
atcagccatcatttcagctttgatggctctgactggactttattggagggcttgattgaa
gtcctccatccttttaaagttgtggcgaatatgatcacttcttgcaggtacccagccatt
agcatggtaaggcctgtacttcatatgttgttgaacaccaacctcaaaatcaaggaagga
gatatcaaagagatcagcatgaccaaagaggtcatctccaaggtcctatcaagcacctat
tcacagaatttgccgctatcgcaagagatctcaacattcctcaacatcgctacattcctt
gatccccggtacaagaagttacctttcctgtccactcaggaacgctccaaagttgagagc
aacgtcatcgaggaggtaaaggcaatccttgagaagcagatgtcagaccaatcatgcctc
gatgatttctccttgttgtctcaagagccacctagtaaaaaacaggcacctctaagagga
tcttcagctagcagtacaacccaagacaaccctcttgctgccatattttgccagtctgat
gcagaccagagccaggaggagctgcatgctcaggttgtagaggagctgagcaactataag
tcacagagggttctaggtctgaatgaagaccctttactctggtggtcaagtcatgcaacc
ttgttccccaccctccccaaggtcctgcagaagtactggtgtgttcctgccacaagtgta
ccctgtcacaggctgttcagttcctctggaactgttctgtgtgggaagaggaactgcata
gctccggctctagtagatcagcaggtattcttgtatgagaactcgcggagctactacgaa
gcggaaccctgtgaggatgatttggacaatgtttgggaaggaaactgtactctgagtcag
cctcttgagtga
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integrated database retrieval system
