Seriola dumerili (greater amberjack): 111233282
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Entry
111233282 CDS
T05606
Name
(RefSeq) tiggy-winkle hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111233282
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111233282
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sdu00536
]
111233282
Peptidases and inhibitors [BR:
sdu01002
]
Cysteine peptidases
Family C46: hedgehog family
111233282
Glycosaminoglycan binding proteins [BR:
sdu00536
]
Heparan sulfate / Heparin
Morphogens
111233282
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
DHQS
Hint_2
DUF6212
Motif
Other DBs
NCBI-GeneID:
111233282
NCBI-ProteinID:
XP_022616781
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MVLMREMLPVSLCLLLLLPSVTSGCGPGRGYGKRRHPKLTPLALKQFIPNVAEKTLGASG
KYEGKITRSSERFKDLTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNLWPGV
KLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYESKGH
IHCSVKAENSVAAKAGGCFPGSSRVILEDGGTKPLRELQAGDKVLAADRQGNLVLSDFLM
FMDRDRKTVREFHVLETEEPRRRLTLTPAHLVFVMNNNRTDGSAVWPVFTSTIKPGQQLL
VVGSERPDLLIPARVTRVHLEQHEGSYAPVTSHGTIIVDQVLASCYAVVGDHDLAHWVFA
PVRLWCSFASLVGMLTELSGVHQPDGVHWYPELLYHVGRWLMDSSCFHPQS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgatgagagagatgctgccggtgtccctctgcctgctgctgctgctgccgtcc
gtcacctcgggctgcggaccgggcaggggatacgggaagcggaggcaccccaagctgaca
ccgctggccctgaaacagttcatccccaacgtggcagagaaaaccctgggagccagcggc
aagtacgagggcaagatcacccgcagctcggagcggttcaaggacctgactcccaactac
aaccccgacatcatcttcaaggacgaggagaacaccaacgcggaccggctgatgacacag
aggtgtaaagacaaactcaactctttggccatttcagtcatgaatctgtggcccggggtg
aaactccgggtcacagagggctgggacgaggacggccatcactctgaggagtctctgcac
tacgagggccgggccgtggacatcaccacctcagaccgagacaagagcaagtacggcatg
ttgtccaggctggctgtggaggcgggcttcgactgggtctactatgagtccaaaggccac
atacactgctctgtgaaagcagaaaactccgtggcggcgaaggcgggcggttgtttccct
gggtcgtccagggtgatcctggaagatggagggactaaaccactgagggagctccaggcg
ggggacaaggtgctggccgctgaccgacagggaaaccttgtcctcagcgacttcctcatg
ttcatggaccgggacagaaagaccgtgagagagttccacgtcctggagaccgaggagcca
cgccgcagactgacgctgaccccggctcacctggtcttcgtgatgaacaacaaccgtacc
gacggcagcgccgtctggcctgtgttcactagtaccataaaaccaggacagcagcttctg
gtcgttgggagtgaacgaccagacctcctcatccctgccagagtgacaagagttcacctg
gagcagcacgaagggtcttatgcgcctgtaacatctcatggcaccatcatcgttgaccag
gtgttggcgtcctgctacgcggtggttggcgatcatgaccttgcacactgggtttttgcc
ccggttcgactgtggtgctcgttcgcgtcactggttgggatgttgacggagctcagcggt
gtgcaccaaccggacggagtccactggtaccctgagctcctctaccacgtggggcgatgg
ctcatggacagcagttgtttccacccacagagctga
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