Seriola dumerili (greater amberjack): 111233360
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Entry
111233360 CDS
T05606
Symbol
mbd5
Name
(RefSeq) methyl-CpG-binding domain protein 5
KO
K23219
methyl-CpG-binding domain protein 5
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111233360 (mbd5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111233360 (mbd5)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
111233360 (mbd5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
111233360 (mbd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWWP
MBD
DUF7028
Motif
Other DBs
NCBI-GeneID:
111233360
NCBI-ProteinID:
XP_022616893
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MNGGKDCEAGDERQAVPVQVPIGWQRKAEHSRGVIYISPSGSVLSSLEQVKTYLLTDGTC
KCGLECPLILHKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKLLAVATLHKSMETHP
PLTLTSPGGGTSSVVAAHSMTQRAIRTKPHDVPPNAVVPDCKSPFKMMMAAGQQQQRLYP
PQEMGGAQQSEIYSGYTRPQRLGSVEPGPKSPYRAGYGGMLSPPPSSAKLYGDGSQSPSA
DTLGSPEGFPRTNPCGFPGAGSPGSASIHGNTRTPLSPPSVMLHGSPAGQPSCAMTGRTS
TPLSPTATAKSPVMNMNMPRGNFPPGVDMPRAAFHHKTQPPVHPVPPPPSIPPSCALQKR
QLTSEKDPLGILDPIPSKPVSQPPTNAPNPSNFQPNIHSQVPMMNVNIPPPAIVPLPSNL
PLPTVKPGPVGHGGHVQRTQQGGPASSMSPSPVTSPVHMAGPALGRVEASPHRSRSSSTS
SDHGNFAMPSGHQGPCGTMKVPPRSPRSAMGSPRPAMPSSPSTNKTDPLHQYKDSQLLPG
MGNSIGTQQHGNPMYSPTSSSSSTSSLVTPSASQKGHPGLLGMPLNQILSQQNAASFPAS
SLLSAAAKAQLANQNKLSAAGNSTAGMTGGGVGMAGMGAGGGGNGGGGGHPGPMSGPRGM
EGHSTLNPMLPPNSTMLLNTPEGQSGRAALRDKLMAQQRDPMRKRKQSSGSAAVNHDNSN
NMVYNMLNKSGMGGPHMPGPSATEQLRKVGRLGNLPPNTSMAQLLQSMSCQSSHNLAGNS
HRPGLSPGPGQGPQGAAQLHYNDSTGIVPGGPQQSLLAQQRLRGPGDAMQHCQNMDTSGG
HLGSRPGQFPDMMAPMQASSMSNCGPMGPGGGPVGPDGMPLGRPNTNPPPLSHPGPHPSQ
QNLLHSMGRTNMVVMSHGGGDGSCTQTISDTGNPSSLGCGVGGLQPHVSTGAGQMYQQQV
HQGMQQGVASHPAYQGQQHFPDNPPYTDSNIANAGSMACLYQNYQQGMLPHSQFGEGQQP
QGEGLPAGTPGSDRGPGGGPESVDAIYRAVVDAASKGMHVTITTTVSGTTQASPVPALSA
MSAFTASIGEPVNLPQAVSAVLHGHQEGEALPQQTRPRQVRPGRGQKNMDPGKSTPDGPD
ANDYFRSPGRGTPRGQWDGETQHGGGFDALSNNSAWGGEEFLECSTQVRSSPCMERPASL
APAPPCPTEGSNDHGLAMAHDKAFLDEGYRFTNCSRTPANYKERLEQTVERCAHINGATP
HFNTRGYGEVLGPPRQELTGDDQSPSSSTSLEGPLATAKDYSHYNGHFNGMAPSPSDTKS
LSSEEDLRQPDSPSSELLHYRSRTFNMGELVWGQLKGFPSWPAKLAGDEQVHSAAMQLRE
QAKVEPEKLKTLTHDLEALDRAAKRGLKPGKLNNHLEAAIHEAMSELDKMSGTIPSRDRQ
VKLPKPKRRKISR
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggaaaggactgtgaggcgggagatgagaggcaggccgtccctgtccaggtc
cccattggctggcagcgcaaggcggagcacagcagaggggtcatatacataagtcccagc
ggctcagtgctgtccagcttggagcaggtgaagacctacctgctgacagatggaacctgc
aaatgcggcctggagtgcccactcatcctccacaaggtgttcaacttcgacccaggggca
gcggtcaagcagaggacagcggaggatgtgaaagcagatgaagacgtcaccaaactctgc
attcacaagaggaagcttctggccgtggccacgctgcacaagagcatggagacacaccca
cctctgacgctgaccagtccagggggaggtacatcatctgtggttgctgcgcactccatg
actcaacgagcaataaggactaaaccccacgatgttccgcccaatgctgttgttcccgac
tgcaagagtcctttcaagatgatgatggcagctggacaacagcagcagaggctgtatcca
ccccaggagatgggtggagcccagcagtccgagatctactctgggtatacgaggccacag
aggctgggcagtgtggagccaggccccaaatccccttaccgggctgggtatggaggcatg
ctgagcccacctccctccagtgctaagctgtatggagatggctcacagtctcccagtgca
gacactctgggcagccctgaggggttcccaaggaccaatccttgtggttttccaggagct
ggcagtcccggctcagcctccatccatgggaatactaggacgcctctttccccacccagc
gtgatgctccatggctcccctgcgggccagccatcctgtgccatgacagggaggactagc
acgcccctctccccaacggccactgccaaaagccctgtcatgaacatgaacatgccacgg
gggaacttcccccctggtgtggatatgccccgtgcagcatttcaccataaaacacagccc
cctgtgcaccccgtgccgccccctccatccataccaccctcctgtgcccttcagaaaagg
cagttgacctctgaaaaagatcccttaggcatcctggaccctatccccagcaaaccagtc
agccagccccccaccaacgccccaaacccctccaacttccagcctaacatccactctcag
gtaccaatgatgaatgtaaacataccccctcccgccattgttcccttgccaagcaactta
cctttacccacagtgaagcctgggcctgtggggcatggtggccatgttcagaggactcaa
cagggtggtccagcttcctccatgtccccctcccctgtcacttcccctgtccacatggcc
gggcctgcccttgggagagttgaggcctcccctcatcgctcacgctcatcctccacctcc
tctgatcatgggaactttgcaatgccctctgggcaccagggcccttgtggcaccatgaag
gttcctcctcgttcccccaggtcagctatgggatctcccaggccagccatgccctccagc
ccctccaccaacaaaacagacccactccaccagtacaaagactcccagctgctgcccggg
atgggaaactcgattggcacccagcagcacggcaaccccatgtactcacccacctcgtcc
tcctcgtcaacctcttctctggtgacccccagcgcttcccagaagggccacccaggactc
ctggggatgcccctcaaccagatcctcagccaacagaatgccgcctccttccccgccagc
agtctcttgtcagctgcagccaaagcacagctagcaaatcaaaacaaactcagcgctgct
ggcaacagcactgctggcatgactggtggtggagttggtatggcaggcatgggggcaggt
ggcggaggtaatggtgggggtggtgggcatcctggccctatgagtggccctcgaggcatg
gagggacacagcactttaaaccccatgctcccgccaaactccaccatgctgctcaacact
cctgagggccagagtggtcgggcagctcttagagacaagctcatggcccagcagagggac
cccatgcgcaaacggaagcagtcgtcaggcagcgcagctgtaaaccatgacaacagtaac
aacatggtctacaacatgcttaacaaatcaggcatgggaggaccccacatgccagggccc
agtgcgactgagcagctgcgaaaagtgggccgacttggaaaccttcccccaaacacctcc
atggcccagcttctccagtccatgagctgccagagctcccacaacctggctgggaacagc
catcgtccaggtcttagccctggtccagggcagggtcctcaaggagctgcacagctgcac
tacaacgacagcacaggcatagtccctggtggccctcagcagagcctccttgcccagcag
aggctgcggggtccaggagatgccatgcagcactgccagaacatggacacgtctgggggc
catctgggttctcgtccaggccagttccctgacatgatggccccaatgcaggcttcctcc
atgagtaactgtgggcctatggggccaggcggtggaccggtgggccctgatggcatgcca
ctgggacgccccaacacaaaccccccaccgctatcccatcctggacctcatccatcacaa
cagaacctccttcacagtatggggcggactaacatggtggtgatgtcacatggaggtggt
gatggaagctgtacacagactatttctgatacaggaaacccgtcatcccttggctgtggt
gtgggaggcctgcagccacatgtcagcactggcgcaggtcagatgtaccagcagcaggtc
caccagggcatgcagcagggggtggcctcccacccagcctaccagggccagcagcacttt
cctgacaacccaccctacacagacagcaacattgccaacgctggctctatggcctgcctc
taccagaactaccagcaggggatgttgcctcactcacagtttggggaggggcaacagccc
cagggagaggggcttccagcgggtacacctggctctgacaggggccccggtggaggtccg
gagtcggtggatgccatctacagagctgttgtggacgccgccagcaagggcatgcatgtt
accataaccaccacagtgagcgggaccacacaggcgagtccggtgcctgccctcagcgcc
atgagtgccttcactgcctccataggggagcctgtcaacctcccccaagcagttagtgca
gtcctgcacgggcaccaggaaggggaggcgttaccccagcagaccaggccgaggcaggtg
aggccaggacggggtcagaagaacatggatccagggaaaagcactccagatggccctgac
gccaatgactacttccgttctcctggccgtgggactcccagggggcaatgggacggggag
acgcagcatgggggaggtttcgacgctctcagcaacaacagcgcctggggaggtgaggag
tttctggagtgttctacccaggtgaggagtagcccttgcatggagcgacccgccagctta
gctcccgccccaccctgccccactgaggggtccaacgatcatggcctggccatggcccac
gataaggcctttctcgacgagggctaccgcttcaccaactgcagccggacacctgcgaac
tacaaggagcgtctggagcagacagtcgaacgctgcgcccatatcaatggtgccacccct
cactttaacactcggggttacggagaagtcctgggccccccacggcaggagctgacgggg
gacgaccagtcacccagttcctccactagcctggagggtcccctggccacagccaaagac
tacagccactacaacggccatttcaacggtatggcgcccagcccctcggacacaaagagc
ctgagcagcgaggaggacctgcggcagcctgactctccctcgtcagagctgctccactac
cggtccaggaccttcaacatgggagagctggtctggggccagctgaagggctttccatcc
tggcctgccaagctggccggggacgaacaagtgcacagcgctgctatgcagttgcgggag
caggccaaggtagagccagagaagctaaaaacactaactcacgacctggaggcacttgac
cgagccgccaaaagaggcctgaaaccggggaaactgaataatcacttggaagctgctatc
cacgaagccatgagcgagctggataagatgtcaggcacaatcccgtcgagagatcgtcag
gtgaagctccccaagcctaagaggaggaaaatatccagataa
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