Seriola dumerili (greater amberjack): 111233411
Help
Entry
111233411 CDS
T05606
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111233411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdu02000
]
111233411
Transporters [BR:
sdu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111233411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
111233411
NCBI-ProteinID:
XP_022616933
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MEERGHWGSKVEFLLAVAGNVVGLGNVWRFPYLCYKNGGGAFLVPYLVFVVTCGIPLFLL
ETTIGQYTQEGGITCWRKLCPLAEGIGYGGQLILFYSCMTYIIILSWALLYLVFSFSSQL
PWSSCNNYWNTDDCVDFSTRNNTVQWTNQTNSTSAATEFWERRVLAISAGIEEIGSIRWE
VLLCLIVMWIICYFCIWKGVKSTGKVVYFTATFPYVMLLILLIRGLSLPGALQGVLFYLL
PEPSRLTDPQVWMEAGAQIFFSYSVGVGSLTVLGSYNTYNNNCYKDCLWLCLLNSGTSVV
AGFAVFSVLGFMAHEQGVPIAEVAESGPGLAFIAYPQAVAMMPVPQLWSICFFVMLILLG
LDTQFVAIEVVVTSIIDMFPTVMRRTGQRERFLLLFCLTCFCSQLVMITEAGMYVFQMFD
NYACNGACILFLCVFETLALGWVFGTERLYDIIKDMTGVRANPFFKICWLYLTPLVSLGS
FICSLVEYQPLTFNRWYVYPAWAYVLGWVMALSSILLVPGWALYKLLTGTGTLSQRFHRL
CRPDLDYSLTQKKEAELQRVGGEALQQFTD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagaggacactggggcagtaaggtggagtttctcctggctgtggcgggaaat
gttgtcggactgggcaacgtgtggaggtttccttacctctgctacaaaaatggagggggt
gcattcctggtgccgtatctggtatttgtggtgacctgtggcatacctctattcctgctg
gagaccaccataggccagtacacccaggagggcggtatcacctgctggaggaaactgtgc
ccgctggcagagggtatcggctatggtgggcagctgatcctcttctacagctgtatgact
tacattattatcctgtcctgggctttgctctacctggtgttctccttcagctcccagctg
ccctggtccagctgcaacaactactggaacacagatgactgtgtagacttttcaacaaga
aataacaccgtccaatggaccaaccagactaattcaacctctgctgccactgaattctgg
gaacgacgagtgctcgctatttcagcggggattgaggagataggcagcatcaggtgggag
gtgctgttgtgtcttattgtcatgtggatcatctgctacttttgtatctggaaaggggtc
aaatctacaggaaaggtggtttatttcactgctacctttccctatgtgatgttgttaatt
cttttgatccgcggactctctcttcctggtgctctgcaaggagtgctgttttatctcctg
cctgaaccttcacgactcacagacccacaggtgtggatggaggctggggctcagatcttc
ttctcatacagtgtgggtgtgggctccttaactgtgctaggcagctacaacacatataac
aataactgctataaagactgtctgtggctgtgtttgctgaacagtggcaccagtgtggta
gctggatttgcagtcttctcggtgctggggttcatggctcatgagcagggcgttcccatt
gcagaagtggccgagtcaggtccaggcctggcattcattgcataccctcaggctgtagcc
atgatgcctgtgcctcaactgtggtccatctgtttctttgtcatgctcattctcctgggt
ctggacacacaatttgtcgctatagaggtggtggtgacgtcgatcatagatatgtttcct
actgtaatgcgcagaacaggccaacgggagcgcttcctcctcctcttctgcctcacatgc
ttctgttctcagcttgtcatgatcactgaggcagggatgtatgtgttccagatgtttgac
aactatgcttgtaatggagcctgcatcctctttctctgtgtgtttgaaaccctggcacta
ggatgggtatttgggaccgagcggttgtatgacatcataaaggacatgacaggtgtgcgt
gccaacccattcttcaaaatctgctggctctacctcacaccactggtctccctgggctct
tttatatgttctttagtggagtaccagcctctaaccttcaatcgctggtatgtgtaccca
gcctgggcatatgtgttgggctgggtaatggccctgtcctccatcctgcttgtgccaggt
tgggcattatataagcttctaactggaactggaaccctcagtcagcgtttccatcgtctg
tgtcgacctgacctggactactcactgacccaaaagaaagaggctgagctgcagcgcgtc
ggaggggaagcccttcaacagttcactgattga
DBGET
integrated database retrieval system
