KEGG   Seriola dumerili (greater amberjack): 111233454
Entry
111233454         CDS       T05606                                 
Symbol
rab39b
Name
(RefSeq) ras-related protein Rab-39B
  KO
K07925  Ras-related protein Rab-39B
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    111233454 (rab39b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sdu04131]
    111233454 (rab39b)
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:sdu04031]
    111233454 (rab39b)
Membrane trafficking [BR:sdu04131]
 Autophagy
  Other autophagy associated proteins
   Rab GTPases
    111233454 (rab39b)
GTP-binding proteins [BR:sdu04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab39/42 [OT]
    111233454 (rab39b)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA AAA_22 TniB
Other DBs
NCBI-GeneID: 111233454
NCBI-ProteinID: XP_022616992
LinkDB
Position
Unknown
AA seq 213 aa
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLESQRQVTRQEAEKLAGAYGMRYIETSARDAINVEHAFTELTRDIFALVRSGEI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq 642 nt   +upstreamnt  +downstreamnt
atggaggcgatatggctctatcagttccggctgatcgtcatcggggactccacggtgggc
aagtcgtgtctgatacggcggttcacggagggccgcttcgcccaggtgtcggaccccacc
gtcggcgtggacttcttctcccggctggtggagatcgagcccgggaagcggatcaagctg
cagatctgggacaccgcgggtcaggagcgctttaggtccatcaccagggcttactaccgt
aactctgtgggcgggctcctcctgttcgacatcaccaatcgccgctccttccagaacgtc
cacgattggcttgaggaggctcgtagccacgtccaaccccacagcatcgtcttcttactg
gtcggccacaagtgtgacctggagtcacagcgccaggtgacccgccaggaggcagagaag
ctggcgggagcgtacgggatgcgctacattgagacgtcggcccgtgatgccatcaatgtg
gaacacgccttcactgagctgaccagagacatcttcgctttggtgcggtctggcgaaatc
acaatccaggagggctgggaaggcgtgaagagcgggtttgtccccaacgtggttcattcc
tccgaggaagtgaccaagagtgaccgccgctgtctctgttga

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