Seriola dumerili (greater amberjack): 111233472 Help Entry 111233472         CDS       T05606                                  Symbol col4a5 Name (RefSeq) collagen alpha-5(IV) chain   KO K06237   collagen type IV alpha Organism sdu  Seriola dumerili (greater amberjack) Pathway sdu04510   Focal adhesion sdu04512   ECM-receptor interaction sdu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sdu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111233472 (col4a5)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     111233472 (col4a5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     111233472 (col4a5)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sdu04147]     111233472 (col4a5)    00536 Glycosaminoglycan binding proteins [BR:sdu00536]     111233472 (col4a5) Exosome [BR:sdu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    111233472 (col4a5) Glycosaminoglycan binding proteins [BR:sdu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111233472 (col4a5) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  111233472 NCBI-ProteinID:  XP_022617014 LinkDB All DBs Position Unknown AA seq 1685 aa AA seqDB search MSKDLKSLRQLTVPLLFLALCVAVQRSDSAACHGCVGSKCDCSGVKGAKGERGFPGLTGQ PGVPGFPGPEGPIGPRGEKGSDGPQGPGGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGP RGVPGCNGTKGDRGFPGSSGIPGQQGLPGPPGLPGPKGDPGDVISTNRFGEKGAVGLPGL PGVPGTSGPPGLPGALGPPGPRGYEGRPGPPGPPGPKGNMGLNFQGPKGEKGEPGLPGPP GPPGQVGEQKRPPETEIQRGDKGDPGLPGPPGDPGYPGPPGPSGGQKGDKGDPGEPGKRG KPGKDGDPGPPGFPGIKGESGLPGPPGRDGERGLKGDRGYPGPPGVIGGQTAGRVGPKGE PGYPGTPGIKGERGPTGLTGPPGTPGRPAIGGNGQPGPPGFPGERGQKGELGPPGLSLPG PPGRPGSPGGQGPQGPPGPPGFSSAGQNCIPGEAGRPGVQGERGYPGETGQKGDKGDTCV NCFGGTSSIPGPPGPPGSPGFPGTPGGQGIKGDRGFPGTPGAVGSPGSPGPQGAPGFPGE KGDPGDAITVTGIRGEKGDTGFPGSPGLPGLDGRPGRDGVPGSPGPKGAPGSLLVKGERG LPGEPGSPGLPGDRGPPGSPGFGPQGPSGEKGVQGVSGRPGGPGAPGAKGEPGLTVAEKG LPGARGQDGEPGLPGGPGSPGQPGQPGFPGLPGAKGDPGLPGIGLPGPPGAKGFLGIPGQ PGAPGGPGRPGVDGLPGQPGFPGAKGEPGFGLPGPPGLPGMPGGKGFSGPKGDPGFPGGP GSPGRSGFDGGPGSKGEPGSPGIPGARGPPGSPSIGSLGAPGPTGPPGPMGPPGFPGSNG EKGDPGAPGLDIPGLPGDRGSPGFPGSPGPLGPPGPPGGPGRDGLPGLPGQKGDMGPMGS PGPSGGPGGPGGPGAPGLKGESGFPGRDGAPGGPGSKGERGDPGVQGPPGASQAPSTPTK GAKGDPGLPGVPGIPGQKGISGLPGDPGLSGSDGRPGLPGPPGPKGDPGIPGTSGGPGAP GQKGGMGEMGFPGPSGQKGLPGQPGRPGSSGQPGSPGFPGSKGEPGSAGVGPPGQPGIKG EPGQPGFPGGSGLKGTPGSPGLPGLPGGPGIKGDPGLPGFQGSPGIPGPKGLDGAPGGPG LTGAPGRPGEPGRSGAPGQPGEKGQAGRDGIPGPAGVKGEPGPPGFGGPGPSGLPGLPGA KGDPGLPGPSGSPGFPGTKGEAGFPGNPGSPGNTGPPGPPGLALQGPKGLQGPPGPPGRA GPSGPAGPEGPRGPQGSGGVKGEKGIPGAPGQPGFPGQKGESGVPGFPGSSGLPGAPGIK GDIGLPGVPGFPGPKGESGIPGGIGVPGDPGEIGLTGPPGDPGIPPAPIVVKGERGPPGP PGGRGSPGAPGSPGREGLPGQPGNPGDPGTEGPPGFSGPPGRKGDTGPAGQPGQRGYPGP PGSDGPQGPPGLPGTASAAHGFLITRHSQGQEVPFCPEGTNIIYDGYSLLYVQGNERAHG QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGESIKPF ISRCAVCEAPAMVIAVHSQTIQIPSCPTNWEALWIGYSFMMHTSAGAEGSGQALASPGSC LEEFRSAPFIECHGRGTCNYYGNSYSFWLATVEPSEMFRKPQSETLKAGNLRTRVSRCVV CMKRT NT seq 5058 nt NT seq  +upstreamnt  +downstreamnt atgagtaaagacttgaagagcctgcgacagctcaccgtgcctctgctcttcctcgccctg tgcgtcgcggtgcagcgatccgactctgcggcttgccatggatgtgtgggatccaaatgt gactgcagtggagtgaaaggagccaagggcgaacggggtttcccaggtctcaccggacag ccaggagtcccagggttccccggacccgaggggccgattggacccagaggagagaagggc agcgatggacctcaaggaccaggtggcccgaagggaattagagggcctcctggattgcca ggatttccaggaacaccaggtcttccaggtctgccagggcaggacggacctccaggcccg agaggagtgccaggttgcaacgggacaaagggtgacagaggttttccaggaagttcagga atccctggacagcaaggactacctggtccacctggtcttccaggaccaaagggagaccca ggcgatgtgatctcaacaaatcgttttggagagaaaggagctgtgggattgcccggattg ccgggagttcctggcacttctggtccccctggtttaccaggtgcactcgggcctcccgga cccagaggatatgagggtcgcccaggtcctcctggtcctcctggaccaaagggaaacatg ggtttgaacttccaaggacccaaaggagagaagggtgaacctggtttgccaggacctccc ggtcctccaggacaggtgggagaacagaagcggcccccagagactgagattcagagagga gacaagggtgacccaggacttcccggccctccaggtgatccaggctatccaggacctcct ggtccctcaggcggccagaaaggagataagggcgatccaggagagccaggcaaacgaggc aaaccaggcaaagacggtgaccctggtcctccaggattccctggcatcaaaggagagtca ggcttgccaggtcctccaggcagggatggagagagaggtctaaaaggagatcgtggatat cctggcccaccaggagtgattggcgggcagacagcaggtcgtgttggtcctaaaggtgag cccgggtaccctggaacacctgggatcaaaggggagcgcggacccacaggtttgacagga cctcccggaacaccaggacgtccagccatcggtggtaatggtcagcctggacctccaggt ttcccaggagaaagaggtcagaaaggagagcttggtcctccagggctctctttgcccggt cccccaggacgtccaggatctcccggtggccaggggccacaagggccccctggacctccg ggcttttccagtgcaggacaaaactgcatccctggagaggctgggcgtcccggcgtgcag ggagagagaggttacccaggagaaacaggccagaaaggtgacaagggcgacacctgtgtg aactgctttggtggcaccagctccatcccaggacccccaggaccccccggatcgcctgga ttccctggaacacctggtggccagggtatcaaaggagacagaggatttccaggaacacct ggagctgtcggctcacctggatcccctggacctcaaggtgccccaggattccccggagag aagggtgacccaggtgatgccatcacagtcactggtataaggggggagaagggtgacact ggtttccccggatcacccggtctgcctggtctggacggacgccccggtcgtgatggagtg cctggatctcctgggcccaaaggagctcccggctctctgctcgtgaaaggagaacgagga ctccccggtgagccaggttcccctggtcttccaggggacaggggtcccccaggttccccc ggctttggacctcaagggccctcaggagagaagggagtgcagggagtctcaggcagacct ggaggtcctggtgcacctggtgctaaaggtgaaccaggcctgacagtagcagagaaagga ttaccaggagccagaggacaggatggagagcctggattgcctggtggaccaggtagccca ggtcagcccggacaacctggtttccctggtttaccaggagcgaagggtgaccctggactc ccaggcatcggactccctggacccccaggagctaaaggattcctaggtatccccggccag ccaggagctcctggaggaccaggcagaccaggagtggatggacttcccggccagcctgga tttcctggagccaagggtgagcctggctttggactacctggcccacctggtttaccagga atgcctggaggtaaaggtttctctggaccaaagggagatcctggtttccctggcggcccc ggttcaccaggacgatctggatttgatggcggcccaggatccaaaggtgagcccggttca cctggtatccctggagctcgtggcccacctggatccccatccattggctcattgggggcc ccaggccccactggacctccaggcccaatgggaccaccaggattccctggatcaaacgga gagaaaggagaccccggtgctccaggtctagatatcccaggtctgccaggagacagagga agtcccggtttcccaggttccccaggaccactcggacccccaggacctcctggaggacct ggacgggatggcctgcctggactgccaggccagaaaggagacatgggtcccatgggatct ccaggaccttctggaggaccaggtggcccaggaggacctggtgctcccggacttaaaggt gaatctggattcccaggtagagacggtgcacccggtggtcccggtagtaaaggagagagg ggagaccctggtgtccaaggacccccaggagccagccaggcaccatcaacacccacaaag ggagccaaaggagatccaggactaccaggtgtaccaggtattccaggtcagaaaggcatc tccggtctccctggtgaccccggcctgtcaggatcagatggtcgccctggactccccgga ccaccaggtcctaagggagatcctggcatcccaggaacttcaggtggtcccggagctcca ggacaaaaaggcggcatgggagaaatgggatttccaggaccatcagggcagaagggtcta ccaggtcagccgggacggccaggatcctcaggacagccaggatcacctggtttccctgga tccaaaggtgaaccaggttctgcaggagtcggaccacctggacaacctggaatcaagggt gagccaggccagccagggttcccaggaggctcaggactcaaaggaactccaggatctccc ggtctcccaggtttacctggaggaccaggcatcaaaggtgaccccggcctcccaggattc caaggttctcctggtatcccaggtcccaagggtctcgacggtgcgcccggtggtccaggt ctcactggagctcccggtagaccaggagagccaggacgatcaggagcaccaggacagcca ggagagaaaggtcaggcaggacgtgatggtatcccaggacctgctggagtcaaaggagag ccaggccctcctggtttcggtggccccggtccttctgggcttccagggttgccaggcgcc aagggagacccaggtcttcccggtccctctggcagtcctggtttccccggtactaaagga gaggctggcttccctggtaaccctggttctccaggaaacactggccctcctgggcctcca ggactggctctgcagggccctaaaggactccaaggtccccctggaccacccggacgagca ggtccctcaggtccagccggcccagagggtcctcgcggaccccaaggaagtggcggcgtt aaaggcgagaagggtattcctggcgctccaggccagcctggcttccccgggcagaaggga gagtctggtgttccaggattcccaggcagctctggtcttcctggtgcccccggtataaag ggagacatcggtctgcctggcgttcctggattccctggacccaagggagagtcaggaatc cctggtggcatcggtgttcccggagaccctggagaaataggacttactggccctcctggt gaccccggtatacctccggctccgatcgtggtgaagggagagcgaggaccccccggtcct ccgggcggacgtggttctccgggagcacctggttcccctggacgcgagggactcccaggt caacctggtaaccctggagatcctggtacggagggtcctcctggcttcagcggcccacct ggcaggaagggagacactggacccgccgggcagcctggtcagcgtggttacccaggtccc cctggttcagacggtccacagggtcctcctggtcttccaggaacagcctctgcagcccac ggcttcctcatcacccgacacagccagggccaggaagtgcccttctgtcccgagggaaca aacatcatctacgacggctactccctgctgtacgtgcagggcaacgagagggcacacgga caggacctcggcacggccggcagctgtctgcgcaggttcagcaccatgcccttcatgttc tgcaacatcaacaacgtctgcaacttcgcctcccgcaacgactactcctactggctgtcc actcccgagcccatgcccatgtccatggcccccatcaccggagagagcatcaagcctttc attagcaggtgtgcagtgtgtgaagctccagccatggtgattgcagtccacagtcagacc attcagatcccctcgtgccctacaaactgggaagctctgtggataggatactccttcatg atgcacaccagtgcgggtgcagagggctccggtcaggccctggcctcccccggctcttgc ctggaggagttccgcagcgctcccttcatcgagtgccacggcagggggacgtgcaactac tacggcaactcctacagcttctggctggccactgtagaacccagtgagatgttcaggaag ccgcagtcggagacgctcaaggcgggtaacctacggacacgcgtcagccgttgcgtggtt tgcatgaagaggacgtaa

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