Seriola dumerili (greater amberjack): 111233496
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Entry
111233496 CDS
T05606
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu02010
ABC transporters
sdu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111233496
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111233496
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdu02000
]
111233496
Transporters [BR:
sdu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111233496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
111233496
NCBI-ProteinID:
XP_022617042
LinkDB
All DBs
Position
Unknown
AA seq
2296 aa
AA seq
DB search
MSVLTQLGLLLWKNFTYRRRQTLQLLVEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGILCNANNPCFRNPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
NLDGFKELAQALQALQSSQSGFKLRHFLRDNETLSEFLRRNASFPEHGVQQIREANVDLE
KVLLRGFGVHLRDMCPRKGGQRSLQDFVTISDPQVSMLVQEVICQAPPTWLNQAEDHFLN
NLDFLKPVRGDVRTDPEAVRQVARATNNLLDSLGSLAVELADMKSWIDLRNEIIFLTQNA
TSSPSAMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEPTSLYDNSST
PYCNSLVKNMDSNPMSRMIWQALKPLLMGKILYTPHNPATQRVIHEVNRTFQELGVFRDL
GGMWEEMRPKVWNFMENSQQMDLIRTLLKNNVTATFFHAQLSDTDWTVADVSNFLSKKVD
DPRPPGSTVTWREVFNETDQAIMSISRFMECVNLDKLEPVSSEERLVNQSMVLLEDRKFW
AGIVFPDIAPNATELPSKLNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGF
SYLQDVIEQGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVA
IILKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKKGNLLPYS
DPGVVFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGF
GAKVFASLLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRTAIILMYFDSF
LYGVLTWYIEAVFPGQYGIPRPWYFPFTKSYWFGEKDGKSNKVPLTRRGNSGAVCMEEEP
AHLEPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TSGTAYILGRDIRTELSTIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVKGEI
EQILQDTGLPHKRTSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWD
LLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKK
EPEPSLSSCRNSSSTVSFTKKEEECASVSSSDAGLGSEHESEAATIENGPAASISDIPFV
PPDVSLVSSLILRHVPAARMVEDLGHELTYVLPYSAAKDGAFVELFKDLDVKLPDLGISS
YGVSDTTLEEIFLKVAEDNGVDTEVPSDGTLPVRRRRRTHAFGGGDHQSCLRPLTEDDNN
DCNESDGDPECRETDWLNCTDGKGSYQVGGWSLKKQQFVALMWKRFLNARRSRKGFFAQI
VLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPGDANMQKLLDALMDA
PGFGTRCMDGHPIPEAPCTMGDEDWHIPDVPESVQQLFSSRNWTMEDPSPPCFCSCDGKK
KMLPDCPPGAGGLPPPEMNLSATDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFR
YGGFSLGARSTQVLPPANEIDDAIERVRKIFELQKGAAADRFLDSLSGFINGLDTKNNVK
IWFNNKGWHSIGAFINVMNNGILRANLPDDKDPREYGISAFNHPLNLTKEQLSQVALVTT
SVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWVANFIWDMCNYV
VPATLVVLIFICFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLT
SVNILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADA
LERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFCIKPRAVSKLTKLGALG
EEDEDVARERQRIVNGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNG
AGKTTTFKMLTGDTVVTSGEAFLAGKSILREIDQVHQNMGYCPQFDAINELLTGREHLEL
YAVLRGIPEKEVCDVAEWGIRKLGLVKYADKAAGSYSGGNMRKLSTAMALIGAPPVVFLD
EPTTGMDPKARRALWNCIHSVIKEGRSIVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQ
HLKNRFGDGYTIILRVAGPDPDLLPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTSLTH
IFSILAKNKETLRIEDYSVTQTTLDQVFVNFAKDQSDEYHSKDTSVRRKDVSINIPTLSS
SPGADEGGEALRESVM
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcctaacacagctgggtctgctgctgtggaagaatttcacctacagacgacga
cagacgcttcagctcctggtggagatcgtctggccgctcttcatcttcttcatcctcatc
gccgtgcggctgaactaccctccatatgaacagcatgagtgtcattttcccaacaaggcg
atgccgtcggccggcacgctgccctggattcagggaatcctctgtaacgccaacaacccc
tgcttcaggaacccgactccgggcgagtctccgggcgtcgtcggcaacttcaacgactcc
ataatctctcgtctgttttcagacgccaagaagattctcctgtacagtcagaatgacaag
aacctggacgggttcaaggagctggctcaggcgctgcaggcgctgcagagcagtcagtca
ggcttcaagttgagacatttcctgagagacaatgagactttgtctgagttcctgcggagg
aacgcctccttccccgaacatggcgtccagcagatcagagaggccaacgtcgacctggag
aaggtcctcctcagaggttttggggtccacctgagggacatgtgtcccaggaaggggggc
cagcggagtctgcaggactttgtgacgatctcggaccctcaggtgtcgatgctggtacag
gaagtgatctgtcaggctccgcccacctggctgaaccaggccgaggaccacttcctgaac
aacctggacttcctgaaacctgtcaggggggacgtgaggacagaccccgaggccgtcaga
caggttgccagggcgaccaacaatctcctggacagtctgggttcactggcagtcgagttg
gctgatatgaagagctggatcgacctgaggaatgagatcatcttcctgacgcagaacgcc
acgtcatcgcccagcgccatgtaccaggcggtctccaggatcgtgtgtggtcaccctgag
ggcggcggtctgcagatcaagtccctgaactggtacgaggacagcaactacaaggctctg
ttcggaaaccacaacagcagcgaggacgagcccacgtcactgtacgataactcctccact
ccgtactgtaacagcctggtgaagaacatggactctaacccaatgtccaggatgatctgg
caggctctgaagcctctgctgatggggaagatcctgtacaccccccacaaccccgccaca
cagagggtcatccacgaggtgaaccggaccttccaggagctcggtgtgttcagggacctg
ggaggaatgtgggaggagatgagacccaaagtctggaacttcatggagaacagtcagcag
atggacctgatccggactctgctgaagaacaatgtcactgccaccttcttccacgcccag
ctgtccgacaccgactggaccgtggccgacgtctccaacttcctgtctaagaaggtggac
gacccgcggccgccgggcagcaccgtcacctggagggaggtgttcaatgagactgaccag
gccatcatgagcatctcccgcttcatggagtgtgtgaacctggacaaactggagccggtc
tccagtgaggagcgactggtcaaccagtccatggtgctgctggaggacaggaagttctgg
gcgggaattgtgttcccggacatcgcccccaacgccacagagctgccatccaaactcaac
tacaagatccgtatggacatcgacaacgtagaaaggaccaacaagatcaaagacgcgtac
tgggaccctggtcctcgtgccgacccctttgaggacatgcggtacatctggggtggattc
tcatacctgcaggacgttattgagcaaggcatcatcagggcggtgacgggcaccaaggag
aagacaggagtctacatccagcagatgccatacccctgctacgtagacgacatcttcctg
cgtgtgatgagccgctccatgcctctcttcatgactctggcctggatgtactcggtggcg
atcatcctgaagagcgtggtgtatgagaaagaggcgcggctgaaggagaccatgaggatc
atgggactagataacgggatcctgtggttcagctggttcatcagcagcctgattcctctg
ctgatcagtgctggtctgttggtgctgctgctcaagaaggggaacctgctgccctacagt
gaccctggtgtggtcttcctcttcctgggatcctttgccgtggtgaccatcatgcaatgc
ttcctcatcagcacggcatttgccagagctaacctagcggcggcctgcggagggatcatt
tacttcaccctctacctcccctacgtgctctgcgtcgcctggcaggactacattggcttc
ggagccaaagtctttgccagcctcctgtctccggtggcgttcgggttcggctgtgagtac
ttcgctctgttcgaggagcagggagtgggaatccagtggaagaacctagtgtcgagtcct
ctggaggaggatgacttcagcctccgcaccgccatcatcctcatgtacttcgactccttc
ctgtatggagtcctcacctggtacatagaggccgtgtttccaggtcaatacgggatccct
cgcccctggtacttccccttcaccaagtcctactggttcggagaaaaggatggaaagtcc
aacaaagtccctctgacccgaagaggaaactcaggagctgtatgtatggaggaggagccg
gctcacctggagcccggcgtctacatcgagaacctggtgaaagtttaccgtcacggtaag
aaactggcagtggacggactgacgcttggcttctatgagggacagatcacctccttcctg
ggacacaacggagccgggaaaaccaccaccatgtccatcctgactggtctgttccctccc
acctctggcaccgcctacatcctgggcagagacatccggaccgagctgagcaccatcaga
cagagtctgggagtctgtccacagcacaacgtgctcttcagcatgctgacggtggaggag
cacatctggttctacgctcggctcaaaggcctgtcggaggagcaggtgaaaggtgagatc
gagcagatcctgcaggacaccgggctgccgcacaaacgcacgtccaggaccagcactctg
tctgggggcatgcagaggaaactgtctgtggctctggcctttgttggcgggtcaaaggtc
gtgatcctggatgagcccacggctggcgtcgacccctatgcccggagagggatctgggac
ctcctactgaagtatcgacagggtcggaccatcatcctgtccactcaccacatggacgag
gcggacatcctgggggaccggatcgccatcatctctcatgggaagctgtgctgtgtgggc
tcgtcgctgtacctgaagaaccagctggggacgggttattacctgacgctggtgaagaaa
gaaccagaaccatcactgagctcctgcaggaactcgtccagcaccgtgtccttcaccaag
aaggaggaggagtgcgcctcggtcagcagcagtgacgcaggacttggcagcgaacatgaa
agtgaggctgctaccatcgagaacggccccgcggcgtccatctctgacatcccctttgtg
cccccggacgtgtctctggtctcaagtctgatcctgcgtcacgtccccgctgcccgcatg
gtggaggacctgggacacgagctgacctacgtcctgccatacagcgccgctaaggatgga
gccttcgtggagctcttcaaagatctggacgtgaagctgcccgaccttggcatctccagc
tacggagtgtcagacaccacactcgaggagattttcctgaaagtggccgaagataacgga
gtcgacactgaagtgccctcagacggtacacttcctgttcggaggcggaggaggactcat
gctttcggtggaggagaccatcagagctgcctgagacctttaactgaggacgacaacaac
gactgcaacgagtccgacggagacccagagtgcagggagacggactggttaaactgtact
gatggtaaaggctcgtaccaggtcggcggatggagtctgaagaagcagcagtttgtggct
ctgatgtggaagcggttcctgaacgcgcggcgctccaggaaaggtttcttcgctcagatt
gttcttcctgctgtgttcgtctgcatcgctctggtcttcagtctcatcgtccccccgttt
ggaaaataccccagtctggagctgcagccctggatgtacgaggaccaggtgaccttcatc
agcgacgatgctcccggagacgccaatatgcagaagttattagacgctttgatggatgct
ccaggcttcggcactcgctgcatggatggacatcccatcccagaggctccctgtaccatg
ggggacgaggactggcatattcctgatgtccctgaaagcgtccagcagctgttcagctcc
agaaactggaccatggaggatccgtctccgccatgtttctgcagctgtgacggcaagaag
aagatgctgccagactgtcctcctggagccgggggtctgcccccccctgagatgaacctg
agcgccaccgacactctgcagaaccttacgggaagaaacatctccgactacctggtgaaa
acctacgctcagatcattggcaagagtttgaagaacaaagtctgggtgaatgagttcagg
tacggaggcttctcattgggcgccaggagcactcaggtcctcccaccagccaatgagatt
gatgacgccatcgaacgagtccgaaagatctttgagttacagaagggagctgctgcagat
cgattcctggacagtctgtcaggtttcattaacggtctggacacgaagaacaacgtcaag
atctggtttaataataaaggctggcacagtattggagcgttcatcaacgtgatgaacaac
ggcatcctgagagcaaacctgcctgacgacaaggaccccagagagtacggcatcagtgcc
ttcaaccatcctctgaacctgaccaaggagcagctgtctcaggtcgcactggtgacgacc
tctgtggacgtcctggtgtccatatgtgtgatctttgccatgtccttcgtccccgcgagc
ttcgtggtcttcctcatccaggagagagtcagtaaagccaaacacatgcagttcatcagc
ggagtgcagccgctgctctactgggtcgccaacttcatctgggacatgtgtaactatgtc
gtaccagcaacactggtcgtcctcatcttcatctgtttccaacaaaaagcctacgtctcc
tccaccaacctgccggtcctcgccctgctgctgctgctctacggctggtccatcacacct
ctcatgtacccagcctccttcttctttaagatccccagcacggcgtacgtcgtcctcacc
agcgtcaacatcctcatcggcatcaatggcagcatctccaccttcgtcatggagctgttt
ggaaacaatgaaatcggaggaatcaacgacatcctgaagaacgtcctcctcatcttccct
cacttctgcctcgggcgaggactcatcgacatggtgaagaaccaggcgatggccgacgcc
ctggagagattcggtgagaacaggttccgctctcctctggagtgggacatggtgggaaag
aacctgttcgcgatggctgtggagggagtggtgttcttcatcatcactgtcctcatccag
tacagattctgcatcaaacccagggccgtcagtaaactcacaaaactgggagcactgggc
gaggaggacgaggacgtggccagagagagacagagaatcgtcaacggcctcggacacgga
gacatcctggagctccgacagctcaccaaggtgttcaagaggaaacagaaacctgctgtg
gatcgactgtgtgtcgggattccacccggagagtgttttgggctcctcggggtgaacgga
gctgggaagacgacgacctttaagatgctgacaggagacacggtggtgacgagcggagag
gcgttcctggccgggaagagcatcctgagggagatcgatcaagtccatcagaacatgggc
tactgtcctcagtttgacgccatcaacgagctgctgacaggaagagaacacctggagctg
tacgccgtcctccgaggaatccccgagaaggaagtctgtgacgtggcggagtggggaatc
aggaagttgggtctggtgaagtacgctgataaagcagcaggaagttacagcggcgggaac
atgaggaaactgtcgacggccatggcgctgattggagctccgcctgtcgtcttcctggac
gagcccaccactggcatggatcccaaggctcgccgggcgctctggaactgcatccacagc
gtcatcaaggagggacgctccatcgtcctcacctcacacagcatggaggagtgtgaggct
ctgtgcaccaggatggccatcatggtgaacggcaggttcagatgtctcggcagcgtccaa
cacctgaaaaacaggttcggggacggctacaccatcatcctgcgggtggcggggcccgac
cccgacctgctgcctgtcatgaagttcatcgagagcgagctgagcggcagcacgctgaag
gagaaacacaggaacatgctgcaataccaactcccctcatccctcacttcactcacccac
atcttctccatcctggccaaaaataaagagacgctgaggatcgaggactactccgtcacc
cagaccactctggaccaggtgtttgtgaactttgcaaaggaccagagcgacgagtatcac
tccaaagacacctctgtgagacggaaagacgtctccatcaacatccccacgctgagctcc
agcccaggagccgacgaggggggagaggcgctgagggaaagcgtcatgtga
DBGET
integrated database retrieval system
