KEGG   Seriola dumerili (greater amberjack): 111233503
Entry
111233503         CDS       T05606                                 
Symbol
rnf4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdu04121]
    111233503 (rnf4)
Enzymes [BR:sdu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111233503 (rnf4)
Ubiquitin system [BR:sdu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111233503 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-RING_4 zf_RING_Vps8 zf-rbx1 Prok-RING_4 zf-C3HC4_4 Rtf2 zf-UDP TRAF3_RING zf-RING_11 IBR_1 MSP1a zf-RING_6 DUF1272 zf-RING_10 DZR zf-RING_16 zf-ANAPC11
Other DBs
NCBI-GeneID: 111233503
NCBI-ProteinID: XP_022617055
UniProt: A0A3B4UVK4
LinkDB
Position
Unknown
AA seq 215 aa
MSSSAHRRRRTTGSPLVSRPSSKNSRAANANRVASRTASRTAGRTVRSTADRMANVSRMA
DSDLAPPTETIDVMDNTEDIVEEVVDLTCEGSEAAVVDLTNNDSVLLLDEGPQNRRVPTG
ESYIVSSDEDEDTSPVLNAAIVSSVHTSRSPPGTISCPVCLDSYSEIVDSGRLVVSTKCG
HVFCSQCLRDALTSSHTCPNCRKRLTHRQYHPLYI
NT seq 648 nt   +upstreamnt  +downstreamnt
atgagcagctctgctcataggaggaggaggaccacaggaagtcctctggtttccagacct
agcagcaagaacagcagagcagctaacgctaacagagtggctagcaggacggctagcagg
acggctggcaggacagttagaagtacagctgacaggatggctaacgttagcaggatggct
gatagtgaccttgccccccccacagagaccattgatgtgatggacaacactgaggacatt
gtggaggaggtggttgatttgacctgtgaaggatcagaagctgctgtggtcgacctcaca
aacaacgactcagtgctgctgctggatgaaggtcctcagaacaggagagtccccacaggt
gagagctacatcgtcagcagtgatgaagatgaggacacgtctcctgtcctaaatgctgcc
atagtgtcctctgttcacacttccaggtcacctccggggacaatcagctgtcccgtttgt
ttggactcgtactctgagatcgtcgacagcggccgattggttgtatccactaaatgtggt
cacgtattttgcagtcagtgtctgagagacgctctgacatcatcacacacctgtcctaac
tgcaggaagagactcactcatcgccagtaccaccccctctacatttga

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