Seriola dumerili (greater amberjack): 111233622
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Entry
111233622 CDS
T05606
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111233622 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111233622 (smarcd1)
03036 Chromosome and associated proteins [BR:
sdu03036
]
111233622 (smarcd1)
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111233622 (smarcd1)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111233622 (smarcd1)
PBAF complex
111233622 (smarcd1)
GBAF(ncBAF) complex
111233622 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
111233622
NCBI-ProteinID:
XP_022617202
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARGGFQTAPTGGGGGAMGPGPPVPGAGPGMGPGTPSGRMGPSSAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagagggggctttcagacagcaccaacgggtggtggtggcggagcgatggga
cctggaccaccagtaccgggcgcaggaccaggcatggggcccgggactccctctggaagg
atgggaccttcgtcggccgcgcagaaccacatgtaccgctccccgatgcccgggcctggg
tacccgagacccggcatgcctccatccagccgtatgaccccacagggaccagccatgggc
ccccccggatacggcagcagtcccgtgtctcgccccgggatgcctggtgtgatggacccg
tctcgtaagaggccggccccccagcagattcagcaggttcagcagcagcagaaccgcaac
cagcatacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactg
gtcccagagtctcaggcttacatggatctgctggcttttgagaggaagctggaccagacc
atcatgcgcaaaagacttgacattcaggaggccctcaagaggcccattaagcaaaagaga
aagcttcggatcttcatatccaacaccttcaaccctgcaaagccagatgctgaggatgga
gaaggaacagttgcatcatgggagctgcgtgttgaggggcgtctgctggaagatacagct
gtgtccaagtatgaagccaccaaacagaagaggaagttctcttctttcttcaagtccctg
gtgattgagttggacaaggacctgtatggtccagataatcaccttgtggaatggcatagg
actgccaccacccaggagactgatggtttccaggtgaagaggccaggtgatgtgggcgtt
cgctgcaccgtccttctcatgctcgactaccagccccctcagttcaaactggaccctcgg
ctggctcgtatgctgggtatccacacccagaccagacctgttataattcaggccctgtgg
cagtatgtcaagacccacaaactccaggaccctcatgagcgtgagttcatcaactgtgac
aagtacctgcagcagatttttgagacccagcgaatgaagttctctgagatcccacagcgc
ttgcatgcactcctgatgcccccagagcctatcatcatcaaccatgtgatcagtgtggac
cccaatgaccaaaagaagactgcctgctatgacattgacgtggaagtggacgacacattg
aagacccagatgaactccttcctgctctccacagccagtcagcaggaaatagcaggactg
gacaacaagatccacgaaaccattgagaccattaaccagctgaagacccagagagagttc
atgctgagttttgccagagatcctcagggctttatcaacgactggctgcagtcccagtgc
agagacctcaagaccatgacagatgtggtaggaaacccagaagaagagcgaagggctgag
ttttactaccagccgtgggctcaggaggcggtctgtcgctacttctactccaaggtccag
cagaggcgacaggagctggagcaggcgctcggcatcaggaacacctaa
DBGET
integrated database retrieval system
