Seriola dumerili (greater amberjack): 111233659
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Entry
111233659 CDS
T05606
Symbol
dennd4b
Name
(RefSeq) DENN domain-containing protein 4B
KO
K20163
DENN domain-containing protein 4
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111233659 (dennd4b)
Membrane trafficking [BR:
sdu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111233659 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
SPA
PPR
Motif
Other DBs
NCBI-GeneID:
111233659
NCBI-ProteinID:
XP_022617250
LinkDB
All DBs
Position
Unknown
AA seq
1518 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLDPAGPWRPLDEDGKTFSSSSSSSSSSTSSLSSSGRAVEPVTD
LAVIAKGLGEEVPEGFTCIEKTLGGHSAELSAGLINNPHLYLCYRRGRDKPPILDLGVLY
EGKEQLKHGWYVIETTPYSRSANLSSGGAPTAHRVFLMYRRALDSQGLHTLGVTDIALLL
PSKGEVAPHTFCRVDKNLNTGMWGPALYVCYKRAVAKANALVYEASLISRYPEDDLEAFP
LPESVPVFCLPMGVTVESWPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYESFPRELLS
ERQCVRLGLLSVVDRRPITNRSLQVKKSICVLSHWPFFTVFQKFLTFVYRYSISGPHVLP
LEKHISSFMHNVPFPSPQRPRILVQLSPYDNLLLCQPVSSPLPLSGASYLKLLQNLGPEN
ACTLLLAVLTEHKLLLHSLRPDVLTSVSEALVSMSFPLRWLCPYIPLCPLQMADVLLAPM
PFIVGVHSSYFDLYDPPTDVVCVDLDTNTIFQSEDKKPLSWRSLPRKHGKILFNTLTNLH
KTLEKICTPGQEEATLEFLLTDYDQIYRRQKQLELEIQEVFLRFMSCLLRGYRTFLLPIT
QAPSDTTTDCSSLFNLQGFLKSRDRTQQKFYGQLTRTQMFTQFIEECSFVSDRHACLEFF
DECVQKVDVEKPEEVRLIDLDETHSGEHTVFIMPPEEPQEPDGSECPALYSYETFPTLKP
DLFDQPQDQLRVPAKGSAPSSPAPRRTKQEIKLAQKRAQKYSAVPDMWSKCLLGHCYGLW
FIYLPTFVRAESAKVRALHTAYDVLKHMENRKVVLPDEVCYRILMQLCGLYGQPVLAVRV
LLEMKKAGITPNTITYGYYNKAVLESKWPSTNQGGRLRWAKLRNVLLAVAQFRQPVKRRQ
KSGSVGSQGDAMVDPDQRLRPQSTLIRQSSWSGLSESSSHESLTGPLLKSNSLNSMKTTD
KVKLCKKTVVHTTGTNGCGDAISHKPPLGLRDTSTPPPAPPGAVLVRRSQVCLSNFYKEC
AESANSEPDCSCQPAERDGRPAAARDSAGRNKAVDENYNHVSSPNRGGLAGKLQQLLTPT
RHRVSVRRAASVDDRRPGGGGGGGIGRRVSEQRQSRKAQVAETLLKAKDRLVSATSESSL
SVGSDLDLTDTPSPAYPLRRSWDANQEGAGLEVSMSSCSLCRSCNSLVYDEEIMAGWTSD
DSNLNSSCPFCSASFVPFLNAEICDLGPVSSAEHSNWNAEDEVESAVRPPSGQEASLRHQ
CNGLSEDSSSETSSYSENSRTTTGSSVGGAPQVTVAYLSPLVLRKELESLLENEGEAVLA
QPQFLDSHSIIFWNLVWYFQRLGLPSNLLQLVRASSLVSQFTQSESSAVRVRLLWDTLTP
DTDQWPPLYILWRIHSGIPMRGYSWRRHNHPFTLSFLEEVLRWVGMNEVHKAVTLFLDTL
AKQPGSPRIQRSLYREFLFLTLAAMGKDHVAAFDKKYKAAYSRLSSTLGREELRKKRLLP
PSPKAIDCRRSFHPPLEC
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagaaatgtccccagctggtggactactttgtagtggcaggtctcgaccct
gcagggccctggaggcccttggatgaggatggcaagaccttctcctcctcctcctcctcc
tcctcctcctcgacgtcctccttgtcttcgtcgggccgggcagtggagccggtgacggac
ctggcggtgatcgccaagggtctcggggaggaggtgccagagggcttcacctgcatcgag
aagaccctgggtggacactcggccgagctgagcgccggcctcatcaacaacccgcacttg
tacctgtgctaccgcagaggacgggacaaaccacccattctggatctgggggttctgtat
gaggggaaggagcagctgaagcacggctggtatgtcatcgagacgacgccatacagccgc
tcggcaaacctgagctccggcggcgccccgacggctcaccgggtgttcctgatgtaccgg
cgggctctagactcacagggcctccacacgctgggcgtcaccgacattgccctgctgctg
cccagcaaaggcgaggtcgccccgcacactttctgtcgcgtcgacaagaacctcaacacc
ggcatgtggggtccagccctgtacgtgtgctacaagagagctgtggctaaagccaacgcc
ttggtctacgaagccagtctgatcagccggtacccggaggacgacttggaggcatttcct
ctgccggagtcggtgccggtcttctgtctcccgatgggcgtcaccgtggagagctggcct
ctgaacacaaagtatcagctgcccgtcttctccaccttcgtcctcacctccgcctgcggg
gacaaggtgtacggagcagccatccagttctacgagtccttccccagggagctgctgtcg
gagcggcagtgcgtgaggctcggcctgctcagcgtggtcgaccggcggccgatcaccaac
cgtagccttcaggtgaagaagagcatctgcgtcctctcccactggcccttcttcaccgtc
tttcagaagtttctcacctttgtctacagatactccatctccgggccccatgtcctgcca
ctggaaaaacacatctccagcttcatgcacaacgtcccgtttccttccccccagcggcct
cgcatcctggttcagctctctccatatgacaacctgctgctctgccagccggtctcctcc
cccctcccactcagtggtgcaagctacctgaagctgctgcagaacctcggcccagagaat
gcctgcacgctgctgctcgccgtcctcaccgaacacaagctgctgctgcactcgctgcgg
cccgacgtcctcacctccgtcagcgaggccctcgtctcgatgagcttccccctgcgctgg
ctctgtccctacatccctctgtgtccgctgcagatggctgacgtgctgctggcgccgatg
cccttcatcgttggtgtccactccagctacttcgacctgtatgacccccccacagacgtg
gtgtgtgtcgacctggacaccaacaccatctttcagtcagaggataagaagccgttgtca
tggcgatcattacccaggaagcacggcaagattctgttcaacaccctcaccaatctccac
aagaccctagagaagatttgcacgcccggccaggaggaggcgacgctggagttcctgctg
accgactacgatcagatctacaggcgtcagaagcagctggagctggagatccaggaagtg
tttctacgcttcatgagctgcctgctgcgaggataccgcaccttcctgctgcccatcaca
caggctccatcagacacaaccaccgattgcagctccctgttcaacctgcagggtttcctg
aagtctcgggaccggacgcagcagaagttttatggccagctgacgaggactcagatgttc
acacagtttatcgaggagtgttccttcgtcagcgaccgtcacgcctgcctcgagttcttc
gacgagtgcgtccagaaggttgacgtggagaagccggaggaggtgaggcttattgatctg
gatgaaactcacagtggcgaacacacggtcttcatcatgcctcctgaggaaccacaggaa
cctgatgggtcagagtgtcccgccctctacagttacgagaccttccccaccctaaagcca
gacctcttcgaccagccacaggaccagctccgtgtcccagctaaaggcagcgcccccagc
agccccgccccccgacgcacaaaacaggagatcaagttggcccagaagcgagctcagaaa
tactctgcagtcccggacatgtggtctaagtgcctgctgggtcactgttacggcctctgg
ttcatctacctgcccaccttcgttcgggcagagagtgccaaggtccgcgccctgcacacg
gcatacgacgtcctcaaacacatggagaaccgcaaggtggtgctgccggacgaggtgtgt
taccggatcctgatgcagttgtgcggtctgtacggtcagccggtcctcgctgttcgagtc
ctgctggagatgaaaaaggcgggaatcacaccaaacaccatcacctatggctactacaac
aaggcagtgctggagagcaagtggccctccaccaatcagggtgggcgtcttcgctgggcc
aagctgaggaacgtcctgttggccgtggcccagttcagacagccagtcaaaaggcgtcag
aagagcggctcagtggggtcacagggagacgcaatggtggaccctgatcagaggctccgc
ccccagtccactctgattcgtcagtccagttggagcggtctgtctgaaagctccagtcat
gagtcgctgaccggccccctgttgaagagcaacagtctaaacagcatgaaaacaactgac
aaggtcaaactctgtaagaagaccgtggtccataccactgggaccaacggctgcggtgac
gccatctcccataaacctcccctgggactaagagacacctccacccctcctccggcgcca
cccggtgctgttctggttcggcggagtcaggtctgcctctccaacttctacaaagagtgt
gccgagtcggccaactctgagccggactgcagctgtcagcctgcggagagagatggcaga
cctgcggcagcacgtgactcagctggcaggaacaaggctgtagatgagaactacaaccat
gtatcttccccgaaccgaggaggtctggcagggaaactccagcagctcctcaccccaacc
agacaccgagtgtctgtgcgacgagccgccagcgtggacgaccgacggccgggtggagga
gggggaggagggattggacgaagagtgtctgagcagagacagtccaggaaagctcaggtg
gcagagacactgctgaaagccaaggacaggctggtcagcgctacctcagagagttcgttg
tctgtaggaagtgacctggacttgacagacacgcccagtccagcgtatcctctgcgcagg
tcctgggacgccaatcaggagggggccgggctggaggtgtcgatgtccagctgctctctg
tgtcgcagctgtaactctctggtttatgatgaggagatcatggccggttggacgtcagac
gactccaacctgaactcgtcctgtccgttctgctccgcctctttcgtccccttcctcaac
gctgagatctgtgacctcggacctgtcagcagtgcggagcacagcaactggaacgcagag
gatgaagtggagagtgcggtgaggccccccagtggtcaggaggcctccctgcgacaccag
tgtaacggtctgagcgaggactccagctctgaaaccagcagctactcagagaacagcaga
accaccacgggttcgtcagtgggtggggctcctcaggtgacggtggcttaccttagtcct
ctggttctgaggaaggagctggagagtctgctggagaacgagggcgaggcagtcctggct
cagcctcagttcctggacagccactccatcatcttctggaatctggtctggtacttccag
cgtctcggtctgcccagtaacctgctccagctggtcagagcctcatcactggtcagccag
ttcacacagtcggagagctcagcagtgagggtgaggctcctctgggacaccctgactccc
gacacagaccagtggccccccctctacatcctctggaggatccacagtggcatcccgatg
agaggctacagctggaggagacacaaccacccattcaccctgtccttcctggaggaggtg
ctgcgctgggtcggcatgaatgaggtgcacaaagccgtcacgctcttcttggatacgctg
gccaaacagccagggtcgcccagaatacagaggagtttgtacagagagttcctcttcctc
actctggcagctatgggcaaagaccacgttgctgcgtttgataagaagtacaaggcggcg
tactctcggctcagcagcactctgggtcgcgaggagctccgaaagaagcgacttctgcct
cccagccccaaagccatcgactgcagacgaagcttccacccgcctctcgaatgctga
DBGET
integrated database retrieval system
