Seriola dumerili (greater amberjack): 111233714
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Entry
111233714 CDS
T05606
Symbol
ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04137
Mitophagy - animal
sdu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111233714 (ambra1)
04137 Mitophagy - animal
111233714 (ambra1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111233714 (ambra1)
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111233714 (ambra1)
Membrane trafficking [BR:
sdu04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
111233714 (ambra1)
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
111233714 (ambra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
WD40_Gbeta
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
111233714
NCBI-ProteinID:
XP_022617316
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MASRQRNSVRILSNRERGSQTFGSQRLLQLLVEEKVRWMKWQSQKVELPDSPRSTFLLAF
SPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSDTE
RVRLVRFDPLGHNLLTAIVNPSNQSEEDLEVPMDSVEMPHFRQRSFLPTQPVRRTPILHN
FLHILSSRSPGAQAGGEQPRPLGDNGSNVGESPSMPLAQYPSSDRGPPFPGCTQHLGMVC
LCSRCSVNRNPPLGANGSSVTPSDPRVSADTPQPPPASTFSSARTEPRQPSERPSAFTSV
YYSAGSSLNPPAPSGVEPHSASRPGPDWTCNLLGMREGGVGQGMLPPRTSSSSSISLLSV
LRQQDGSSQSPVYTSATEGRGFPQQGEGGARDAAGTSSGHHPFWDGSRSNTASFRNVLQC
NLSRYFMEFDRMQDLEPPLGGGMTDGSQEQNQELLNNNMDPDRPGPSSSSTAPTIIHYQP
PLPPPPSSHSLENNVPPPASRGHLNRCRACHNLLTFNHDSQRWERTNQASSTSASSLEAP
TSSSSSFPTSSSPWQPEESRRTLEAQPQERRAPPEPSEQPPPSGGGGAGAVAFPIGPSST
QPGEQTVGLVYNQDTAQWERVYRQAAAGRSAEPPEALSQEMPVDPPDEDSLRRRLLESSL
LSLSRYDMSGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRAMSS
SSDSPASNPSSSMDNSDVDFEELDDNGDRARHRTPRNARMSAPSLGRFVPRRFLLPEYLP
YAGIFHERGQPGLATHSSVNRILAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEIS
NASVNVLVSNCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAIYSLAPHNLGEMLY
TKRFGPNAISVSLSPMGCYVMVGLASRRILLHPTTDHMVAQVFRLQQPHGGETSIRMVFN
VVYPMAPDQRRHVSINSARWLPDPGMGLAYGTNKGDLVICRPVFYRSDGESPAESNSEPL
FSVNNSGTSRTRGSDRPGPNRSGWRLDRDMGLMNAIGLQPRHPAPSVTSQGTQTPIIQLQ
NAETQTERDLSEPSVSQPPPNVLPLSSDVPPETPSTSAAAQGQMEASPSSRAQDSVQGEA
SSEANTSTAAGESPDFGSGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVS
HRIHRGSQTAPGASRPSADPTAPSSSSGPLLITQTQSYPPPQTSSPSEQLAPMWGPQVLS
GPPPSGLSLDMDDVFDGGRTDDDSLPGPSSSSLLLYSPSSSSSSSHSPLPGGGGGRPNSY
PGDPYSR
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgtcagaggaactcggtccggatcctgtccaaccgggagcgaggctcccag
acctttggctcccagagactcctgcagctgctggtggaggagaaggtccgctggatgaaa
tggcagagtcagaaagtggagctgccggacagtcctcggtccacgttcctgctggccttc
agccctgacaggaccctcatggcttccacacatgtcaaccacaacatttacataacagag
gtgaagacaggaaagtgcctacattccttagtgggccaccgtagaaccccctggtgtgtg
accttccaccccacgatacccggcctggtggcctccgggtgccttgacggagaagtccga
atctgggacctgcatggtgggagtgagagttggttcacagagagtaacgtggccatcgcc
tccctcgccttccaccccacggctcagctcctcctgatcgccaccaacaacgagctgcac
ttctgggactggagccgaccggagcccttcgccgtggtcaagacgggcagcgacacggag
agagtccggttggtgcggttcgaccctctgggccacaacctgctgactgcgatcgtgaat
ccgtccaatcagagcgaggaggacttggaggttcccatggacagtgtggagatgcctcac
ttccgtcagcgctccttcctccccacccagccggttcgccgcacgcccatcctccacaac
ttcctgcacatcttgtcgtctcgctccccgggggctcaggctggaggcgagcagccccgc
cccttaggggataatggaagcaacgtgggagaatctcccagcatgcctctggcccagtac
cccagctctgaccgcgggccccccttccccggctgcacccagcacctgggcatggtgtgc
ctgtgtagtcgctgctctgtcaatcgtaacccccccctgggcgccaacggttcctctgtg
accccctctgatcccagggtgtcagctgacactccccagccccccccggcctccaccttc
tcctcggcccgtacagagccccggcagccgtcggagcgcccctcggccttcacctcagtc
tactacagcgccggctcctctctgaacccccccgccccaagtggcgtcgagccgcactcc
gcctccagaccaggacccgactggacctgcaacctgctcggcatgagggaggggggggtt
ggccagggtatgctgcctcccagaacctcctcctcctcctccatcagcctgctgtcagtg
ctccgtcagcaggatggctcctcccaatcccccgtgtacacctccgccactgaagggcgg
ggcttcccccagcaaggagagggcggggccagagacgccgcggggacgagcagcgggcac
caccccttctgggacggctctcgcagcaacacggcgtcgttcaggaacgtgctgcagtgc
aacctgagccgctacttcatggagtttgaccgcatgcaggacctggagccgccgctgggg
gggggcatgacggacggcagccaggagcagaatcaggagctgctcaataataacatggac
cctgacagacccgggccttcctcctcctccaccgcccccaccatcatccactaccagcct
cctctccctccccctccctcctcccacagcctggagaacaacgttcctccccccgcctcc
cgcggtcacctgaaccgctgccgggcctgccacaacctgctgaccttcaaccacgactct
cagcgctgggagcgcaccaaccaggcctcctccacctccgcctcctctctggaggccccc
acctcctcctcctcctccttccccacctcctcctccccctggcaacctgaggagagcagg
aggacactagaagcccagccccaggagaggagggcgcctccggagcccagcgagcagccc
cctccctctggaggaggaggcgcaggagcagtggccttccccatcggcccctcctccacc
cagcctggggagcagacggtggggctggtgtacaaccaggacacggcgcagtgggagagg
gtgtaccggcaggctgctgccgggcgctccgcagagccaccggaggccttaagccaagaa
atgcctgttgacccccccgacgaggactcgctaaggaggcgactgttggaatcgtctctg
ttatcgttgtctcgctacgacatgtcaggatccagagaccaccccatctaccctgatcca
gccagactttctccagctgcttactatgcccagaggatgatccagtatctgtccagacgg
gacagcatccgccagcgctcgctccgttaccagcagaaccgcctgcgggccatgtcgtcg
tcgtcagacagccccgccagcaacccgtccagctccatggacaacagtgacgtggacttc
gaggagctggatgataacggagacagagcgagacacaggacgccacgaaacgccaggatg
tccgccccctccctgggtcgcttcgtccctcggaggttcctcctccctgagtatctgccc
tatgctggaatcttccatgagagaggacaaccaggcctggccacacactcctctgtcaac
agaatcctcgctggagcgtcgattggagacggtcagtctgcggtggccagtaacatcgct
aacaccacctaccgtctgcagtggtgggacttcaccaagttcgacctgccagagatcagc
aacgcttcagtcaacgtcctggtgtcaaactgtaagatctacaacgacgccagctgcgac
atctctgcggatggtcagctgctggccgtcttcattcccagcagccagcgggggtttcca
gacgagggtatcctggccatctactctctggctcctcacaacctgggagagatgctctac
accaagagattcggtccaaatgccatctctgtcagcctgtctcccatgggctgctacgtc
atggtgggcctggcctctcgcaggatcctgctgcatcccaccaccgaccacatggtggcg
caagtcttccgcctgcagcagcctcacggaggagagacgtccatcaggatggtctttaac
gtggtctaccccatggctccagaccagagacgtcacgtcagcatcaactctgcccgctgg
ctgcccgatcctgggatgggtctggcttatggaaccaacaagggagacctggtcatctgc
cggcctgtattctatcgcagtgatggtgagagccctgcagagtcgaacagcgaacctctt
ttctccgtcaacaacagtggaaccagccggacccgaggttctgacagaccagggcctaat
cgctccggctggcggctggacagagacatgggattgatgaacgccatcggtcttcagccc
cgacaccccgctccttctgtgacatcacaaggaacccagacgccaatcatccagctgcag
aacgccgagacgcagacagagagggacctatcagagcccagcgtctcccagcccccaccc
aatgtccttcctctctcctcagatgtccctcctgagactccgtccaccagtgcagcagct
cagggacagatggaggcgtctccgagcagcagagctcaggacagcgtccagggtgaagct
tcatcagaggccaacacctccactgctgcaggggagtctccggatttcggctcaggtgag
gacgctctggcacggattcgccgtctgatcgcggagggtggtatgacggcagtggtccag
cgggagcagagcaccaccatggcgtcgatgggcggcttcgggaacaacatcattgtcagc
catcgcatccaccgtggctcccagacggctcccggggcctccaggccctcggctgacccc
acggccccctcctcctcctcaggtcccctcctcatcacccagacccagtcgtacccccct
ccccagacctccagcccgtctgaacagttggcccccatgtggggcccccaggtgctgtcg
ggcccccccccctccggcctctctctggatatggacgacgtgtttgacggaggacggacg
gacgacgactctctgccgggtccctcgtcttcctccctgctgctgtattccccctcttcc
tcctcctcctcctctcacagccctctccctggcggcggcggtggccgccccaacagttac
cccggcgacccgtacagcaggtag
DBGET
integrated database retrieval system
