Seriola dumerili (greater amberjack): 111234293
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Entry
111234293 CDS
T05606
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111234293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111234293
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111234293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Calici_MSP
Motif
Other DBs
NCBI-GeneID:
111234293
NCBI-ProteinID:
XP_022618012
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MRVLRRRVAAMSPREKHLALLSVLCVVSLALYYIPTFLYATLIIGVCCIVCYYHSGEPLP
ARLGLNPRAGLNVPALLRRWLLGWGVTGVSVAARGKTKSSSNRTELRGPEGHFRPTLTET
GIYRREALASDSFLFSPRDFLMGSYIGKPESPTADSGRPRAGRNPREQLREKLSRPNHAV
YTPNRRLSFAGEPLGTVGRFTITPQRHYPLQQPGVSSVGVLPPVKWDGFRKKNVLSPRNS
PAALSPVTVKIARPNHNTPSLDHLSCAGLPRAPADPCSRESVLRVLKESRKREVEDEDRS
FTTEQKSKRRRNDSGGSAHSAFEPLLPNGTPSQLVPKPGSLKRGMTSLAEESIMKRSRTS
SISSGSGAHAPRGTPGSKRNPIHSSYSSSLGLSQWKKPSAPSSPLSSPGSSRSQTPEGAS
KRPREDDGQSPSSASSVRSDQIATDKAPVTSKLTPVPKIPVTTSADSTGSGGKRKRKIQL
VSSHRDDHISLPPPPELGYTITVKDLDEEKKAAISKIQKVLETPAPEQEKSVSPPATNST
KPTSSTSSTTTTTLSSLLAAPLPTASSSAIPVINLDPSPGSSVSTAPAASNPLLEALKMK
TSTPAISTSAASTTTVSASTTPVQPSSLNLKATTAVGVPQLPPASQSQSSTAGVEQPSAF
TQVLGQVFKASSSTPPVAGTGLFGLASQISTPSASTASNTVTVATTAPASSYESLSNTNP
LLASGFKPIFAVSTTPSSATSAPESKPPVQNFKPIFGGATTNAGFGQPVSLTTTNPVSTV
SSSSTPSIFGGSTSSTTAASSVFPGLTNTPTGTASTGSITTTQPAAQPGVKSLFGNWSTP
STTSTGSATTQAPNTGSTFQFGTVPTTTAAAAAAAAAPATATTTSSNGTFTFGVTQPDPQ
AANQKVFAFGQPAPSQNTTTASFGGFAMANTASTTSAATTQSTFTFGKPSFEAPAAQTTF
GSSAAPSKPFTFGGSVASSTPASNPAPAPFTFGAPAATTATTFGTPAKPAFGASSTGFAF
GGSTAPSAAPSAAPSFGAATQTQSSSSSTFTFGSGAPQPAPSGPAQPAPSGFNFGAGMAC
PQFGTPVSNNPAPHMGSFNFGAAATDKPAFGTSTPSFGQNAAAGPIAFGSPGNPVQGFNA
APFGSPATPSFSIGAGSKPSGARQRLQARRQHNRKK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcctccggcggcgcgttgccgccatgtcacctagagagaaacatttagcgctt
ctctctgttttatgcgtagttagtcttgccctttattatattcctacttttctttacgcg
actttaattattggagtttgttgcattgtgtgttactatcacagcggagaaccgcttccc
gccaggttaggcctgaatccgcgagctggactaaacgtcccagccttgctcaggcgttgg
ttgttgggttggggggtgaccggcgtgtcggtggctgcccgagggaaaacgaagagtagc
agcaacagaaccgagctccggggaccagagggacacttcagaccaacgctcacggaaact
gggatttatcggagggaagctttggcaagtgactcgtttcttttcagcccccgggatttc
ctcatggggagttacatcgggaaacccgaaagtccaaccgctgactccgggaggccgagg
gcagggagaaatccccgagagcagctgcgggaaaagctgtctagacccaaccatgctgtc
tataccccaaacaggaggttgtcatttgctggggagccactgggcacagtaggcaggttc
accatcaccccgcagcgtcattacccgttgcagcagccaggtgtctcgtcagtgggagtc
ctacctcctgtcaagtgggatggcttcaggaagaaaaatgtcctcagcccccgtaactcc
ccggcagccctcagtcctgtcacagtgaagattgccaggcccaaccacaacacccccagt
ttggaccatctgagttgtgcagggctccccagggcccctgcagacccctgctccagagaa
agtgtcctcagggtgttgaaggaaagccgcaagagagaagtggaagatgaggacaggagc
ttcacaactgagcagaaaagcaagcgaaggcgtaatgacagtggtggaagcgcacactct
gcttttgaacctcttttgcccaatggaacaccatcacagttggtccctaagccaggaagc
ctgaaaagagggatgacctcattggcagaggagtcgatcatgaagaggtctcgcacctcg
tccatcagctctggcagtggggcacatgcccctagaggaaccccaggcagcaagagaaac
cctatccacagctcctacagctcttcattaggcctcagccagtggaagaaaccgtcagct
cccagctcacctctgtcaagccctggatcatctcgctcccagactccagaaggagcctcc
aaaagacccagagaggacgatgggcagtctcccagctcagcatcctctgtgaggtcagac
cagatagccaccgacaaggcacctgttacttccaaactgactccagttcccaagatcccc
gtcactacctcagcagactctactggtagtggtgggaagagaaaacggaagatccagctg
gtgtccagccaccgggacgatcacatctcactgcccccacctccagagcttggttacacc
atcactgtgaaagacctagatgaagagaaaaaggctgctatcagcaagatccagaaagtc
ctggaaacgcctgctccagagcaagagaagtctgtctctcccccagccaccaattccacc
aagcccacctcctccaccagctctaccacgaccaccaccctgagcagccttcttgcagct
cctctgcctacagcctccagctctgccatcccagtcatcaaccttgatcccagcccaggc
agcagtgtgagcacagcacctgcagcttccaacccactgctggaggctctcaaaatgaag
accagcactcctgctatctccacatctgctgccagcacaaccacagtgtctgcatcgacc
acaccagtgcaacccagcagtttaaacctgaaggcaacaactgcagtgggtgtcccacag
ctccctcctgcctcccagtctcagtcctccactgctggtgtggagcagccctcagccttt
actcaggtccttggtcaggtcttcaaggcttccagcagcaccccacctgtagcaggaaca
ggcctgtttggattggctagccagatcagcaccccctctgcttctacagcctccaacaca
gtcactgttgctactactgctccagccagcagctatgagtcactcagtaacacaaaccct
ctgctggcttcagggttcaagcccatctttgctgtcagcaccaccccctcctcagctaca
tcagctccagagagcaaacctcctgttcaaaatttcaaacccatctttggaggtgctact
acaaatgctggctttgggcagcctgtatccctcacaaccaccaacccagtctctacagtt
tcttcaagtagtacaccctcaatatttggtggatcaacaagcagcaccacagctgcctca
tctgtttttccaggcttgaccaacacccccactggaacagcctccactggctccatcacc
accacacagcctgcagcccagccaggtgtgaaatccctctttggaaactggtccacacca
tccacaacaagtacaggctcagccacaacgcaggcccctaatacagggagcacatttcaa
tttggaactgttcccaccactactgcagctgcagctgcagcagcagctgccccagctact
gctaccacaacctccagcaatggcaccttcacatttggtgtcacacagccggacccacaa
gctgccaaccagaaggtatttgcttttggccaaccagcccccagtcagaacacaaccact
gcttcatttggaggctttgccatggccaacactgcctccaccacttctgccgccaccacc
cagtccactttcacctttggaaagccgtcatttgaggcgccagcagcacagacaacattt
ggctcctcagcagcaccgtcaaaaccattcacttttggaggcagcgttgcatcatccaca
cctgcctctaaccccgccccagctcctttcacttttggggcacctgctgccaccacagca
accacgttcgggacccctgctaaaccagcatttggagccagctccactggttttgctttt
ggtggctccacagccccctcagctgcaccctcagctgcaccaagcttcggtgctgcaacc
cagactcagagctcctcctcatccacctttacatttggtagtggtgctcctcagccggct
ccctctggccctgctcagccagcacccagtggatttaactttggtgctggtatggcatgc
ccccagtttggaacaccagtctccaataatcctgcaccgcatatgggaagcttcaatttt
ggggctgctgctactgacaaaccagcttttgggacatctaccccatcctttggccagaat
gctgcggcaggtccaattgcctttggaagtcctggaaatccagtccaaggcttcaatgct
gctccttttgggtctccagctactccctccttctctattggagctggatcaaaaccatct
ggagcacgtcagagactgcaggcacggaggcaacacaacaggaagaagtaa
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