Seriola dumerili (greater amberjack): 111234319
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Entry
111234319 CDS
T05606
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111234319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111234319
03036 Chromosome and associated proteins [BR:
sdu03036
]
111234319
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111234319
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111234319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
111234319
NCBI-ProteinID:
XP_022618049
LinkDB
All DBs
Position
Unknown
AA seq
1909 aa
AA seq
DB search
MTSVVHLLRDMSTAMLSTTTNKLNVLVNKLHEYLAHSTVEDSNGTPTLEDSDGLTNWSCS
VGTGHTAAEAGVDTKYSRRKPSVVIKHSGLDESGDSNASEDLDLPFNANGHLDITRLPKG
TVLVRPEPVDNGRDDFRGPEFRSRKSGVLRKDFSRRRGGVEHIGIVSCTACGRQVNHFQR
DSLYRHPVLKVLICKSCYKYYLSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKC
ILRNLGRKELSGILESKWYCYVCSPDPLFDLVVACDNVLESMEHLWQQQRKRNRAEPGKS
GLYHMLPHLPQNIPLDKWDHTGMDGNVVFNYNTLQIPKDMTKKAKHLVDTTNTLNRTFVN
FIHTVTRNKQAPGVRQLYLKSFLSVVKGLRKSLVILEDSLKEEFSDLDVLSCWEKFLSDD
FDGQTVTDTEPEISEERCFGNLQKLAAEHLENDDDSDSKGFVDGRSTYDCPGEDMDSDSH
EARQSSQKIGPKLSETGVNMTKKLVVKLTPVPMDQKPSSHAPKMEEDIHMKDKQSEGKDV
SEDKETADSKMSNDNSSASQHLEEEHGNRRSPRVKTTPLRRPSDVTGKSSLTAADSDSDS
DPEETPSTVPAKNTEEQSLSRARDDSDSDEVPAALLERAALTQSSDDLQSDEDGGKASTK
VAKKCLFWLTKNTPMSPEKMRRKRKMLDRSPKSDSNDRRVKARRESGTDFSSDDQDSQKK
IQHLKRLRSIGKPHLIKREEKGVAKKHDRIQAGKSKAKSRQEAMESSTSLSEDERDDDSG
SDGSDQKIKPITEDEALLGAAAFHQSSGDEEHSGLSWAAEDDDDPENRIAKKMLLAQIKA
NYSSGDDISSDEDTQEDESDESDDDKEVRQGNKESGTDENGEDLASESSDAMSGGPKTKH
HLLRHKLTLDEETSSNKAAAESEVGKQKSKKKASSKCLSSDGGSSGDNTESNLDDLGMSE
ELSQSEDETEEEKLKSSRLTRKVKETPRSFKQTKEVPFILLSDTSTEKSDPEDGEEDIDS
KGTPKRRKKIRKIIEDENLRAETQEALREEEERCKRLADRDQQMEDRREVFVIADELSQV
ACPITTKLVLDQDEETKKPLVQVHRNLVTCLKPHQVDGVQFIWDSCCESVKKANSSPGSG
CILAHCMGLGKTLQVVAFLHTVLLSRNLKFRTALVVCPLNTILNWVSEFKKWQGNMGKDT
VKVTELATIKHPSERLGALQSWQRDGGVLIIGYEMYRILSLGQKINNEQWKTELKSILVD
PGPDIVVCDEGHILRNDASNISKAMNAVTTRRRVVLTGTPLQNNLIEYHCMVNFIKKNLL
GSLGEFRNRFINPIQNGQCADSTPKDVRIMKRRAHVLHAMLAGCVQRRDYSELTQFLPPK
HEYVLAVRVSPLQYKLYRHYLDHVTGVGSMVNAAKIRTRANLFKDFQVLSRIWTHPWCLQ
LSYVSKIKKGHFEKKNQVKAAALLRNEDVTLPESGLKENEGTEETNPNNSTMVSAAVSKD
ALVVEGEKATTSSKSESADEGWYKSLLSEVDAKILEHSGKMVLLFEILRMAEDLGDKVLV
FSQSLISLNLIEDFLQASHHARNPSSSKAGSWIKNIDYYRLDGSTSATYRKKWADHFNSA
ANVRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVCVYRF
LAQGTMEEKIYDRQVTKQSLSYRVVDQQQIERHFTLFELTELYIFEPDLLNDPNSKKSKR
PSSVSPKDKVLAQLLQTCKDQIVSYHEHESLLDHKQEEELSEAERKDAWAEYEAESNTSN
LSVSASQETLEKKSNEELLELLNKCRKNVSVAFLSMQKTKSHTIEDYLLRVWHQYPQLPE
DHIKTKAEIWRLCDEKEQERRQAFYRDILAQQQTLTLSIQAILNSRRNQ
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggttgttcacctgcttcgcgatatgtctacagcgatgctcagtactactacc
aacaagctgaatgtattggtcaacaagctgcatgagtacttggctcattccactgttgag
gacagcaatggcacaccaacactagaggattctgatggtctgacaaactggagctgctct
gtgggaacaggtcatactgcagcagaggcaggagtggataccaagtactcaagaagaaaa
ccttctgttgtcataaagcattctggtctggatgaatctggggactcaaatgcaagtgag
gacttggatttaccattcaatgcaaatggtcaccttgatataactagactgcctaaaggc
actgtattagtcaggcctgaaccagttgataatggaagagatgacttcaggggtccggag
tttcgcagccgcaaatccggtgtactgcggaaagatttctcaagaagacgtggaggagtt
gaacacatcggaattgtcagttgcactgcatgtggccgacaagttaaccacttccagaga
gattccctctatcggcatccagttctgaaagtacttatttgcaagtcttgctacaagtat
tacttaagtgacgacatcagtaaggatggagatggaatggatgagcagtgcagatggtgt
gctgaaggaggaaatttgatctgttgtgacttctgtagtaatgccttttgcaagaagtgc
attctaagaaatttgggaaggaaggagctgtctggcatcttggagagtaaatggtactgc
tatgtgtgtagtccagatccccttttcgacttggttgtggcctgtgacaatgtcctggag
agcatggagcatctgtggcaacagcagcgcaagaggaaccgagcggagccggggaaatct
ggactttatcacatgttgccacacttaccacaaaacattcctttggataaatgggatcac
actggtatggatggtaatgtggttttcaactataacacactgcagattcccaaggacatg
accaaaaaggccaaacacttagtggacacaacaaacaccttaaaccgaacatttgtcaat
ttcattcatactgtgacaagaaacaaacaagcacctggtgttcgccagctgtatctgaag
tcttttttgtcagtagttaaaggcttgcgaaaatcacttgtcatacttgaggatagcctg
aaggaagaattcagtgacttggatgtattgagctgttgggaaaagttccttagtgatgac
tttgatggacaaactgtaacagacacagagccggagatctctgaagaaagatgctttggc
aacttgcagaaattggcagctgaacatttggaaaacgatgatgattctgactccaagggt
ttcgtagatgggagaagtacatatgactgccctggggaagacatggattcagattcacat
gaagccaggcagagttcacaaaagattggcccgaagctgtcagaaacaggggtcaacatg
actaaaaaattagtagtaaaacttacacctgtacctatggatcagaagccttcctctcat
gccccaaagatggaggaggacatccacatgaaggataaacagtcagagggaaaagatgta
tcagaagataaagagacagctgacagcaagatgagcaatgacaattctagtgcatctcaa
cacttagaagaggaacatggcaatagacggtctcctcgcgtaaagacgacccctttgcgc
cgaccaagtgatgtcacaggcaaatcgtcgcttactgcagcagacagtgacagtgactct
gaccctgaggaaactcccagcacagtacctgcaaaaaacactgaagaacaaagtctaagc
agagcaagagatgactctgactcagatgaagtccctgcagctctgcttgagcgagcagct
ctgacgcaaagctctgatgacctgcagagtgatgaggatggtggaaaagcgtcaactaag
gtggccaagaaatgtctcttttggctcactaagaacaccccgatgtcgccagagaagatg
cgccgcaaacgcaaaatgctggaccgctcccccaagtctgactcaaatgacagaagagtc
aaagctcgaagggaaagtgggacagatttctccagtgatgatcaagactcccagaagaaa
atacaacacttgaaaaggctgaggtcaatagggaagcctcacctcatcaaaagagaggag
aaaggtgtggctaaaaagcacgataggatacaggctgggaagtctaaggctaaatctcgt
caggaagcaatggagtcgtcaacctcattgagtgaagatgaacgtgatgatgactctgga
agtgacggaagtgatcagaagataaagccgatcactgaagatgaggccttactgggagca
gcagcattccaccaatcatcaggagatgaggagcactccgggctctcgtgggcagcagaa
gatgatgatgatccagaaaatagaatcgctaagaaaatgctattggcccaaatcaaagcc
aactactcctcgggtgatgatatctcttcggatgaggacacgcaggaggatgaatctgat
gagtcggacgatgacaaggaggtcagacaaggcaataaggaaagtggaacagatgaaaat
ggggaagacttggcctcagaatcatctgacgccatgtccggtgggccaaagacaaagcat
catctgctacgccacaaactcaccttggatgaggaaacatcaagtaataaggccgcggca
gagagtgaagtaggaaagcagaagagcaagaaaaaagccagcagcaaatgtctgagctct
gatggtggaagcagtggtgacaatacagagtcgaacctggatgaccttggcatgagcgag
gagctgagtcagtcagaggatgagacagaagaagaaaagcttaaaagctccagattaacc
aggaaagtgaaggaaacaccccgtagtttcaaacagacgaaagaagtgcccttcatttta
ttgtctgacacaagcactgaaaagagtgatccagaagatggagaggaggatatcgactct
aagggcactcccaaaagacgcaaaaagatccgcaaaatcattgaagatgagaatcttcgt
gctgagacccaggaagcgctgagagaggaggaggagagatgcaaacggttggcagatagg
gatcaacaaatggaagacaggagagaggtatttgtcatagcggatgagctgtctcaagtg
gcgtgtcccatcaccaccaagctggtcctggatcaggatgaggagaccaagaagcccctc
gttcaggtgcacaggaacctggtgacatgcctgaagcctcaccaggtggatggtgtccag
tttatttgggacagctgttgtgagtctgtgaagaaggccaactcttctccaggatcaggc
tgtatactggcacattgcatgggcctggggaagactctgcaggtggtcgcattcctccac
acagtcctgctgtcaagaaacctgaaattcagaacagccctggttgtgtgtccacttaat
actatcctcaactgggtcagcgagttcaaaaaatggcaaggaaacatgggaaaggataca
gtcaaggttacagaactggctacaataaagcatccttcagaacgacttggagctctgcag
agctggcagagagatggaggtgttttgataattggttatgagatgtaccgcatcctgtca
ctaggccagaaaatcaacaacgagcagtggaagacagagttaaagagcatactcgtggac
cccggcccagacattgtggtttgtgacgaagggcacatcctgcgcaatgatgcgtccaat
atctccaaagctatgaatgctgtcacgacccgacgaagagtggtgctaactggcacacca
ctgcaaaataacctgattgagtaccactgcatggtcaatttcatcaagaagaatctcctg
ggctcattgggcgaattccgaaaccggtttatcaaccccatacagaacgggcaatgtgct
gactccacgccaaaagatgtcagaatcatgaagaggcgagcacatgtacttcatgcaatg
ttggctggatgtgtgcagagaagagattactctgagttgacacagtttctacctcccaaa
catgagtacgtgctggcagtgagggtttccccgcttcagtataagttgtaccgccactac
cttgaccacgtcactggtgtgggttccatggttaacgcagcaaagataaggactagagca
aacctgttcaaggactttcaggtgctcagccgaatttggactcatccctggtgccttcag
ctcagctatgtcagcaaaataaaaaaggggcattttgaaaagaagaaccaagttaaagca
gcagctctgctgagaaatgaagatgtcactctgcctgagagtggactgaaagagaacgaa
ggaacagaagagacaaaccccaacaacagtacaatggttagcgctgctgtgtccaaagat
gctctagtagtggaaggagagaaagcaaccactagctcaaagtctgagagtgcagatgaa
ggctggtacaagagtctgctgtctgaagtggatgccaaaatcctggagcactcagggaag
atggtgctcttgtttgagattctcagaatggccgaagatctgggggataaagtgcttgtg
ttcagtcagtccctgatctcattaaacctaattgaggattttctacaggcttctcaccat
gcaagaaacccatcatcatccaaagcaggcagctggattaaaaacattgattattaccgt
ctggatggctccaccagtgctacatacaggaagaaatgggcagatcatttcaacagtgct
gccaatgtccgcggacgattgtttctcatctcaacgagagctggctctcttggcataaac
ctcgtggcagccaacagggtcatcatttttgatgcctcatggaatccctcttatgacata
cagagcatatacagggtgtaccgctttggtcagctgaaacaagtgtgtgtgtaccgcttt
ttagctcagggcaccatggaggagaagatctatgatcgtcaggtgaccaagcagtctttg
tcctatcgagtggtagatcagcagcagattgagaggcacttcaccctttttgaactgact
gaactgtatatatttgagccggacctgctgaacgacccaaactctaagaaaagcaagaga
cccagttctgtttcgccaaaggataaggtcctggcacaactgttgcaaacctgtaaagac
cagatagtgtcataccacgagcatgaatctctgctggaccataaacaagaggaggagctc
agtgaagcagaacgcaaagatgcctgggctgagtacgaggccgagtcaaacacatccaac
ctttcagtcagtgcgagccaggaaactctggagaagaagagcaatgaagaattattggaa
ttgcttaacaagtgcagaaaaaatgtatcggtggccttcttgtcaatgcagaagacgaag
tctcacactattgaagactacctgttacgagtgtggcaccagtatcctcaactgcctgaa
gaccacattaagaccaaggctgagatttggagactgtgtgatgagaaggagcaggagcgt
agacaggccttttatcgagacatccttgcacagcaacaaaccctcacactcagcattcag
gccatactgaacagtcgaagaaatcagtga
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integrated database retrieval system
