Seriola dumerili (greater amberjack): 111234555
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Entry
111234555 CDS
T05606
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111234555
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111234555
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
111234555
NCBI-ProteinID:
XP_022618423
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MENLTPEQWREIMNKKMLFPPELISAIQEGKIELLCGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNEDAMDTLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTQKGHIIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLRAFSLSRELRKLSQKEPEFKPQYL
GLEQLCQEFAVELLGMCRNQSEVTTILNSCGDESQDALQEQAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLFVSVGIFLTMPFLCLVYWIAPKSKVG
KILKIPVIKFLLHSASYLWFLITLLGESITMEMYRDKFASRQQNMLHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDMMVLSMYLASFALRVLIMLKGYLLCHDHNGAEECVYF
TQTVREDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPHLGRFNETFHFLFWTMFGVANQDYVDMPQFVLAEF
VGRILYGIFTLVIVIILLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTIPV
PFNIIPSPKAVFYILRGIFKQICCCCSCNSEQKYPPIASMSNDKGSEDSQLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITELSKAVCRMHSDMKVIQQLLMDDGHIPSDALTKD
GSSILGKYIIGAKNNFRGFNSRQEDKNTSLQVTVHHEDEGVDKEKVADAKQESDTQQNQV
GECGAEGTTQVTDCDVVKMEEGRAKIETEDEKETEKEEQVEADKNENMYNKIKEEGAAGA
SFNNVEEKMKAEVTQDEAENIREEEIHTGAKIGEKHTEATTEPIESIKVSNEKTETKKLV
NKFKDIELQEKKVEARWMKGRKFEHNVAEKSGVRESNDKPGVQKTIPSPTGSSSSQDTGF
GSQEGEGSIDGSLVRP
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgcgagattatgaacaagaagatgctgttccct
ccggagctcatcagtgcaattcaggaagggaaaatagagctgctgtgtggactgttgaaa
accggtgatggcatcatccgtcagctggatgaatctgaggaccgccagtggagagaggcc
ctcaacctgtccatccgcctgggcaatgaggatgccatggacaccctcctgcagggggtc
aagtttgacttccgtcagattcatgaggccctgctggttgctgtggacaccaaccagccc
agagtggtgaagcgtctgctggaccgcctggaccaagagaaaggcaacaagatggatgtg
cgctccttctctcaggccatctttgaccactctattgacaattcccagtttgcccccggt
gtcacccctctgaccttagcctgccagaaagacctgtatgacatagtcaccatgctcacc
caaaaaggtcacatcatcccatggccacataagatatcctgcgcctgtctggaatgtcga
aacgggcggcagtacgacctgctgaagttctccttgtctcgcattaacacctaccgtggc
atcgccagccgtgcctacctgtccatcacttctgatgatgccatgctcagagctttcagt
ctcagcagagagctccggaagctctcacaaaaagagccagagttcaagcctcagtacctt
ggcctggaacagctctgtcaggagtttgccgttgagttgctgggcatgtgtcgcaaccag
agcgaggtcaccaccatccttaacagctgtggagacgagagccaggatgccttacaagag
caggcctttgaggagggaatacccaacctgtcacgactgcggcttgctgtcaactacaac
cagaagcagtttgtggcacacccaatctgccagcaggtactttcgtcaatctggtgtggg
aacctggcaggctggagaggcagcaggacggcctggaagctgtttgtctccgtggggatc
ttcctcaccatgcctttcctctgccttgtctactggattgcaccaaagtcaaaggtagga
aagatccttaagattcctgtgatcaaattcctccttcactcagcctcctatctgtggttt
ctaatcacactgcttggagaatcaataacaatggagatgtatcgagacaaattcgcttcc
cggcagcagaatatgctgcacagctccttccacatggtgtgggtggttggattcttctgg
tatgagtgtaaggaagtgtggatcgaggggctgcggagttacttcctggactggtggaac
tgcttggacatgatggtgctcagcatgtacctggcgtcctttgcgttacgtgtgctcatc
atgctcaaaggttacctcctctgccatgatcataacggcgcagaggagtgtgtttatttc
acccagactgtgcgtgaggactggcatcaggaggacccccagctcattgccgaggtgctg
tttgcagtgaccagcatgttgagcttcacacggctggcgtacatcctgccagcccatgag
tctctgggaactctgcagatctccatcggaaagatgattgacgatatgatgagatttatg
tttatattgatgatcattggaacagccttcctctgtggcatcaacaatgtctatgttcct
tacgtcatctctccacatcttggcaggtttaatgagaccttccacttcttattctggacc
atgtttggcgtggccaaccaggactacgtggacatgccacagtttgtgttggcagagttt
gtaggacggattctgtacggcatcttcacgctcgtcattgtcatcatcctgctcaacatg
cttattgctatgatcaccaactcctttcagaaaattgaggatgatgcagatgttgagtgg
aaatttgctcggtcaaagctgtacctcagctacttcagagagggcctcaccatacctgta
cccttcaacatcatcccctcacccaaagctgtcttttacatcttaaggggtatcttcaaa
caaatctgctgctgctgctcttgtaattctgagcaaaaatatcccccgatagcctctatg
tccaatgataagggatctgaagacagccagttaccttaccggcagcaggtgatcagggct
ctggtgcagcgctacattgagtcagctcgcagggagtttgaggagaccaagaggaaagat
atcggtaatcgcatcactgagctgagcaaagcagtctgcaggatgcacagtgatatgaaa
gtgatccagcagcttctgatggatgacggacacattccaagtgatgcgttgaccaaggat
ggctcctccatactagggaaatacataattggcgccaagaacaatttcagaggttttaac
agcagacaagaggacaagaacacatcacttcaagtgacagttcaccatgaagacgaaggg
gttgataaagaaaaagttgcagatgcaaagcaggagtcagacacacaacagaatcaggtg
ggtgaatgtggagcagaggggacaacgcaggtaacggactgtgatgtggtgaagatggag
gaaggcagagctaaaatagagacagaagatgaaaaggaaactgagaaggaagagcaggtc
gaagcagacaaaaatgaaaatatgtacaataaaataaaagaggagggggcagcaggagca
agttttaacaatgttgaagaaaagatgaaagccgaggtcacacaggatgaagcagaaaat
ataagggaagaagagatacacacaggggcaaagattggtgaaaaacacacagaggcaact
actgaaccaattgagagcatcaaagtcagcaatgaaaagacagagacaaagaaattagta
aataagttcaaagacatagagctgcaagaaaaaaaagtggaggccagatggatgaagggt
agaaagttcgagcataatgtagctgagaagtctggtgtcagagagagcaacgacaaacct
ggagttcagaaaaccattccctcgccaacaggcagcagcagctcccaggacacaggcttt
ggttcacaagaaggggaggggtcaatcgatgggtcgctagtgagaccttag
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