Seriola dumerili (greater amberjack): 111234557
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Entry
111234557 CDS
T05606
Name
(RefSeq) LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111234557
Cell adhesion molecules [BR:
sdu04515
]
Immunoglobulin superfamily
DSCAM family
111234557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
C1-set
Ig_6
C2-set_3
Sp38
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
111234557
NCBI-ProteinID:
XP_022618426
LinkDB
All DBs
Position
Unknown
AA seq
2104 aa
AA seq
DB search
MRSGAAGLERPPGSTVASPARRPAWPKTAPHTCQDCQIFLKNIPAIYGMWLVTLLLLYSL
QEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRWYLATGDDIYDVPH
IRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIKAVFREPYTVRVA
DQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIVPGNRFSLTSFGALYISDVQKEDA
LSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGEVYAGQSIELPCIAGGY
PSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSFGSKEVSGQLHVI
DPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTITWYRNTEPIVPDQHISIQGQHNDTLQ
ITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVNPGEPFSLMCAAK
GAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRDGGVYRCVARNSAG
SAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLKDSMQLPDNHRQV
VFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLIQPFDIPSTSVGKL
MYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIETKEFMSSLQISKVTLKHNGNYTCI
ASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPPPKVMWKHAKGVG
NPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDISKSMILTVKIPAM
ITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYSITINKKGDEVIS
TLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREVKDRSMNLRWIQR
FDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVYSIRMYSYNKIGR
SLPSKELTISTEEAPPDGPPMDVVLQPMTSQSIRVTWRAPKKELQNGVIRGYQIGYRENG
PGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSTEINATTLEDVP
SEPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGGGCCGGQAQWPMQ
KWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQTREDLPGPPAGI
KAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYEANPEMLFYRITHLTR
GKQYHIWAAAVTTAGRGNISSKVTVEPAGKVPAKILSFGGTVTTPWMKEVRLPCSSVGEP
VPTIKWTKDSEDSAIPVTADSQRQILSNGTLVLRSVKAEDSGYYTCTATNTLGFDTIIIN
LVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWRDVFISSSE
RSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQPLLTHINSTHAG
LNLQGWTSGGCPITDLMLDFRPKGTWAWQSLKANSTTQLFLSELREATWYELKMKACNSA
GCGNQSSQFATTDYDGSTIPPIKSARGEGDDVKKLFSIGSPVILVTLGVALLFIIRKKRK
EKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQIGE
DKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPGTNPVSRKSIKSV
HSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGSHGITATESDSYSASLSQDTDKGR
NSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQMTTGTNDPADSM
TSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPLYMKTDPFFRKQG
ELHDPCPAVPPREASIRSLTQRAYHTQGRHKTLDPAKQQALTLGHSGLGSLGSSSGTATL
PQRTLTMPSSNTAATASTSSTSSNPTNSNKVGGSRDSLLESSSSALGRLQKQSVGAYSKS
YTLV
NT seq
6315 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagcggggcagcagggctggagagacctccggggagcacagtcgccagtccagca
cggagacccgcctggccaaaaaccgcgcctcacacttgccaggattgccaaatattcctg
aaaaatatacctgctatttatggcatgtggcttgtaactttactcctgctgtactctctc
caagaagtacacagtgaggatgtgggctctaccaggctgtactttgtgaatgcctccctg
cagagggtaacctactccagctcggtgggggtgtccctgccctgtccagcagggggcacc
cccagtgccatactgcgctggtacctggcaaccggcgacgacatctacgacgtgccccac
atccgccacgtgcacgccaatggcactctacaactataccccttctcgccctccgcctac
aacagctacatccatgacaacgactacttctgcactgctgaaaaccaggccggcaagatc
cgcagccccaacatccgcatcaaagctgttttcagggagccctacactgtgcgggtggca
gaccaacgctcgatgcggggcaacgtagctgtgttcaagtgcctcatccccgctgccgtg
caggagtacgtcagcgttgtgtcctgggagagagacaccgtttccattgtcccaggtaac
aggttctcgctgacctccttcggagcgctttacatctctgatgttcagaaggaggatgcc
ctctctacataccggtgcatcaccaaacacaagtacagcggcgagacgcggcaaagcaat
ggagccaggctctccgtaatggacccgaatgagtcctcacccaccatcctggacagtttc
caagcaggggaggtgtatgcaggccagagtatcgagctcccctgcatagcggggggttac
cccagccccaccgtgcgctggctgaaagacggtcgcccgctgccctcagatgcccgctgg
acacggcgtttgacagggctgaccatcagtgacctgaggcaggaggacagcggcagctat
gcctgtgaggtcaccaacagttttggctcaaaggaggtgtctggacagcttcacgttata
gatccactacgcgtgaccttatcccccaagaatctgaaaacaggcatcagcagcacactg
ttcttcacctgcactgtggagggctctccagaatacaccatcacctggtacaggaacaca
gagcccatcgtccctgaccagcacatctccatccagggacaacacaacgacaccctgcaa
atcactgcagcgcagaagttccactctggggcctaccagtgcttcgcctcccgcaagggc
cacactgctcaggatttttccattattctgctcgaggatggtactcctcgtattgtgtct
tccttcagcgagcgggtggtcaaccccggcgagcctttctccctcatgtgtgcggccaaa
ggagccccacccccctccatcacctggacgctggacgacgagcctgtggtgcgggactcc
acctacaagaccagccagtacaccctgtcggacggcctgactgtgtcacatgtcaacgtc
agcagcccgctcattcgagatgggggggtgtatcgttgcgtcgcacgcaactcggccggt
agcgccgagtaccaagcgcgcataaacgtaagaggtccacctcgaatcagacccatgcgg
gacatcaccgcagtggcgggcaggaacacctacattacatgccgtgtgattggttacccg
tattactccatcaagtggctgaaggacagcatgcagctgcctgataatcatcgtcaagtg
gtgtttgagaacggcaccctgcggctgacggacgtgcagaagggcgcagatgagggcacc
tacttgtgtagcgttctgatccagccccaggtgtcaatcaatcagacggtccacgtcact
gtcaaagtgccgccgctcatccagccctttgatatcccctctacctcagtggggaagctc
atgtacatcgcctgtgtggtgtcatctggggacatgcccatacgcattacctggcacaaa
gacggccagctcatcgtgccaggctccgcctctggcgtcgcaatagagaccaaagagttc
atgagctccctacaaatctccaaggtgacactgaagcacaacgggaactacacctgcatc
gccagcaatgccgccgccaccgtcagctgggaaagacagttgattgttactgtgccacca
cgttttgttgtgcaacccaacaaccaggactgtatttacggcaaagctggagttctcaac
tgctctgtggagggttatccaccaccaaaagtcatgtggaaacatgccaaaggtgtagga
aaccctcagcagtaccacccagtcccacttactggccgtatccagatcatgtcaaacggc
tctctgctcatccgacatgttcttgaggacgaccgagggtactacctctgtcaggcctcc
aatggagtgggctcagacatcagtaagagcatgatcctcactgtcaagattcctgccatg
atcaccagccaccccaacaccaccatggcaagaaagggccagaccaaggagctgaattgc
acagcgcggggcgagcaacccattattatccgctgggagagaggggacaccgtgatcgac
gcagagagaaacccccgttactccatcactatcaacaagaagggggacgaagtcatctcc
accctaaagctgaacccagcagagcgaggagactctgtcttcttctcctgtcatgctatc
aactcctatggagagggtcgagggctcatccaactcactgtgcaagaaccaccagatccc
ccagagcttgaagtgagggaggtgaaggacagaagcatgaacctgcgctggatccaaagg
tttgatggaaacagcatcatcacaagctatgacatcgagtacaagaacaagtcagactcc
tgggatcacatgtacacaaccaggaacatctcacccaccaacaaccaagccaacattgta
gagttgcacccagcctgtgtttacagcatccgcatgtactcctacaataagattggccgc
agccttccaagcaaagagctcacaatcagtaccgaagaagcgccgcctgacgggcctcca
atggatgtagtcctccaaccgatgacatcccaaagcatacgggttacatggagggctccc
aagaaagagctgcagaatggagtgattcgaggctaccagattggttacagagagaatggt
ccaggcagcaacggccagtacagcatagtggagatgaaggctacaggggacagtgaggtg
tacactttggacaacctaaagaagtttgcccagtacggggtagtggtccaggccttcaac
agagctgggaccggcccatccagtactgagataaatgctacaacgctggaagacgtgccc
agcgagcctcctcagaatgtgcgagccatttcggtgacgtcggacgaggcggtgatcaca
tgggcagagcctccacggctgacgctgcacggtgtgctgaaaggctaccgggttgtgttt
tggtccctcttccctgacggaggtgggtgctgtgggggccaggcccagtggccaatgcag
aaatggggagagatgcagaatatcaccactactcgtgaacaggtggagctgcgaggactg
gagaagttcaccaactacagtgttcaggtgctggcctacacacaagctggagatggggtc
cgcagcaacgtcctgtatatccaaacccgcgaggatttacctggaccacccgctggcatc
aaggcagttccctcttctccgagtagtgtggttgtgtcctggttacctcctcacaaacca
aatggtgtcatccgcaagtacaccatctactgctccagcccagggtctggacagccggca
cccagtgagtatgaggccaacccagagatgctcttctaccgtatcacgcaccttacccgt
ggtaaacaataccacatctgggctgcagccgtgacaactgccggccgtggcaacatcagc
tcaaaggtcacagtggagcctgctgggaaagtcccggctaaaatcctgtccttcggaggc
acagtgaccacaccctggatgaaggaagtgcgtctgccctgcagctcagtgggagagccc
gtccccacaattaaatggaccaaagacagtgaggactctgctattccagtgacagctgac
agtcagcggcagatcttatccaacggcaccctggtgctgcgctcagtcaaagcagaggat
tctgggtactacacctgtacagccaccaacacactgggctttgacaccatcataatcaat
cttgtggtgcaagttcctcctgaccagcctcgtctgactgtctccactacctcaacctcc
tccatcaccctggcgtggatccctggggacaatggaggaagctccatcagaggatttgtg
ctgcagtactctgtggacaacacagaggaatggagggatgtgttcatcagctccagtgag
cgttccttcaggttggacaacctgcgctgtggcacctggtacaaggtcaagttggccgca
aagaacagtgtgggctcagggcgcatcagcgagatcattgaggcaaagacccatggaaga
gaaccagtgttcaataaggaccagccgctgctcacccacatcaactccactcatgcaggg
ctcaacctgcagggctggaccagtggcggctgccccatcactgacctgatgctggacttc
aggcccaaaggtacctgggcttggcagagcctcaaggccaactctaccactcagctcttc
ctcagcgagctgcgagaggccacctggtatgagctcaaaatgaaagcctgcaatagtgca
gggtgtggcaaccagagctcccagtttgccactactgactatgatggcagtaccatcccc
cccattaaatcagctcgcggagagggcgatgatgtgaaaaaactgttctctattggctct
cccgtcatcctggttactctcggtgttgctttgctcttcattatccgcaagaaacgcaag
gagaagaggcttaaacgtcttagggatgctaagagccttgctgagatgcttatcagcaag
aacaatcgcagtatagacactcctgtgaagggccctcctcaaggaccaaggctccacatt
gacatcccacgagttcagctgctcattgaggacaaggaaggcatcaaacagataggggag
gacaaggcagcagtgccagtgacagacactgagtttagccaatcagtgaatccgcagaac
ttctgtacaggcgtgtctctgcaccaccaggccctcatccagaattcagggcctttgatt
gacatgtcagacatccgcccaggcacaaaccctgtctccaggaagagtataaaatcagtt
cacagctccaggaacagatactccagccagtggacactgagccggccaagtcagagtcag
tcgacagcctcggcacgaactctgacctcagactggcgaacgatgggctctcatggcatc
actgcgactgagagtgacagctacagcgccagcctctcccaagacacagataagggtcgc
aacagcatggtgtcgacagagagcgcctcctccacctacgaggaactggcacgagcctat
gagcacgccaaactggaggagcacctgcagcatgccaagttcaccattacagagtgtttc
atctctgacagctcatctgaccaaatgaccacaggcaccaacgacccagcagacagcatg
acctccctcagcacgccttctgaaccaggcatctgccgcttcaccgcctcaccacccaaa
ccgcaggactacgaccgtggtaaaaatgtggctgtgcccattccccaccgcgctaacaaa
agtgaattctgcaacctacccctgtacatgaagacagacccattcttccgtaagcaaggg
gagctgcatgacccatgcccggctgtgccaccgcgggaagcttcgatccgcagcctgacg
cagcgggcgtatcacacccagggccgtcacaagactctagaccctgccaagcagcaggcc
ctcacactgggccattctgggcttggcagcttgggttcgagctcaggcactgccaccttg
ccccaaaggactctcaccatgcccagctccaacactgcagcaacagcttccacttccagc
acgagcagcaaccccaccaacagtaacaaggtggggggctccagagactcgctgctagag
agcagctcctctgcattggggagactgcagaaacagagtgtgggggcctactccaagtcg
tacacactggtgtag
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integrated database retrieval system
