Seriola dumerili (greater amberjack): 111234592
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Entry
111234592 CDS
T05606
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111234592 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111234592 (nfrkb)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
111234592 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
111234592
NCBI-ProteinID:
XP_022618473
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MDALTHMLTDALDPKEENDGQITEECMLGNCRVNLPEDLLEDPEIFFSVMSESTWSEVLT
DSQRQHLRQFLPQFPDNNVVEQDNSLGDLFNNKNFNFGNPLHLAQKLFRDGYFNPEVVKY
RQLCAKSQRKRQLYSLQQYYHRLLKQILVSRKELLEFAVHNGLDFPPKRKVPNKSHAEMR
EPRVRRRLSRILKEVKTECGDSNASSDDDDISTWTPAPQSPSSPTPTVALRVLPSLSTQD
MKTTEKIELGERDLKAMLHNHREKRKRQPDHPDLTTSDIHLGDILSRANFGRKGTMSLFD
LSLPKKKMRDERRKKKMRTIKVESEDPFETLAPADNPSAPPANIINSLPDTPSTPLPNIK
EEIVEECQSSPVTVEEIAVSFFSLLESILRTENLASTSMLEEKVQMWQSSPASALNGWFS
SASCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFADDSQQWRWIGPTQDTEKDLSAL
CQLWLDSKDLVVKTENEDMLEMTSPTPRVSTDYVVRPSTGDERQVFQVQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRHRS
QEEFERIHQAQAAAAKARKALQQKPKPTSKPKSGSKDGGSKTPGCLEAGQDIGSNPMSPT
PTTPTPNTPGTPKSPLPCAATTPTKTGVPDTMKSSPGVLLVSPPSLPQLGTILPTSQAGP
PASQPVTSQHAARIVSHLAAGALPQVRVVSAQAGLGSSAGNQQATLVHQTPHQIRMPVSV
AAKGISQTVVSVPLRSQSASSPVQVPTTLSVSAVTVAKPPTGSPGSPANNPASPAVLQGV
ASPNIKQVSITGQLGMKTPGGAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITP
DMMATLAKSPVATVKLTPDFLGTATSGSKSISATLHVTPPHHSPSSATSATSCTGDVQTT
KAGPVASTLLKAAGDTAIRLMPTLAVTTDQKSRTFSTVTSPDKSGATIRIMPGLGVIPQK
QGQTITMTTTTGSKPLTATSCANVVTMAASVVAGAKGITVAPGASGSPLTLGTATATVRQ
VPATVVTTQTGKLPARITVPLSVLNQPLKSKSVVTTPIVKGSLNANISSLGRNIILTTMP
AGTKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHMATGSPKSVSTVVVT
TAPSPKCAPDPPPAPQQ
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcacacacatgcttacagacgctcttgatcctaaagaagaaaacgatgga
caaatcacagaggaatgcatgttggggaactgcagagtgaaccttccagaggacctactt
gaggaccctgaaattttcttctctgtgatgagcgaaagcacctggagtgaagtactgaca
gattcccagaggcagcaccttcgtcagtttttgccacagtttcctgacaacaatgttgtg
gagcaggacaactccctcggtgacctattcaacaacaaaaattttaactttggaaatccc
cttcatcttgcacaaaaactattcagagatggttacttcaatcctgaggtggtcaagtac
agacaattgtgtgccaagtcccagagaaagcgacagttgtactcccttcagcagtattac
cacagactgttgaagcagatcctcgtctccagaaaggagctgctggagtttgctgttcat
aatggtctggactttccacctaaaagaaaggtaccaaataagtctcatgctgaaatgcgg
gagccaagggtgagaagaagattgagccgcatattaaaggaggtcaaaactgagtgtgga
gacagcaatgcctcttctgatgatgatgacatatcaacatggactccagcaccacaatca
ccgtcctctccgacacccactgtcgcgctcagagttcttcccagcctctccacccaagac
atgaagactactgaaaaaatagaactaggtgagcgggacttgaaagccatgctgcataat
catcgcgagaagaggaagcgacagccagaccatcccgacctgacgacctctgatatccac
cttggagacatactttcaagagcaaattttggtcgaaaggggacaatgtcactctttgat
ctgtctttgccaaagaagaaaatgagagatgagagaaggaagaagaaaatgaggacaata
aaagtggaatctgaggatccttttgaaactcttgcacctgcagacaacccctccgctcca
ccagcgaacatcatcaactccttgccagacacaccatctactccactgcccaacatcaag
gaagaaattgtggaggagtgtcagagcagcccggttacagttgaggaaatagctgtcagt
ttcttcagcttgttggagagcatcttaaggacagaaaaccttgccagtacttcaatgttg
gaggagaaagttcaaatgtggcagtcctctccagccagtgccctcaacgggtggttttca
tctgcctcctgttggtctgacttggttcttcaagccctgcagtttcttgcaggagagact
aaagatggcatgatggcactccccagtggcttttctccatttgtggaatttgctgatgac
tctcagcagtggaggtggattggtcccactcaggatacagagaaagatctcagtgcactc
tgtcagctgtggctggactccaaagatttagttgtcaagacagaaaatgaagacatgcta
gagatgacctctcccacaccaagagtttcgactgattatgtggtgcggcccagcactgga
gatgaaagacaagtgtttcaagtccaggaacagcagcgatacaaccagccacataaagcc
ttcacctttaggatgcatggctttgaatctgtggtgggacctgttaaaggagtgtttgat
aaggagatgtctctcaacaaagccagggagcacacactgctccgctcagaccggccacca
tatgtcaccattctctctctggtgcgggatgcagcagccaggttacccaatggagaggga
acaagggcagagatctgtgaactgttgaaagactcacagtttcttgctccagatgtcact
agtgctcaggtgaacacagttgtcagtggggctctggatagacttcactatgagaaagat
ccctgtgtaaagtatgacattggccgcaaactgtggatttacctgcaccgccatcgcagt
caagaggagtttgagaggatccaccaggctcaagctgcggctgcaaaagcaagaaaagct
ctacagcagaaacctaaaccaacatctaagcctaagtctggaagtaaagacggaggcagt
aaaacccctggatgtctggaggcaggacaggatataggctccaaccccatgtcgccaacc
cctacaacacccacaccaaacacacctggaacccctaagtcacccttaccctgcgcagcc
accacgccaacaaaaactggagtcccagatacaatgaaatccagcccaggtgttcttctt
gtgtcccctccatctttgccccagctggggaccatcttacccaccagtcaggctggtcca
ccagcctcacagccagtcacgtcccagcatgcggctcggatagtgagtcacctcgcggca
ggcgccctccctcaggtgcgagtagtgtctgctcaggctggtctgggctcttcagcagga
aatcagcaggctacactggtgcatcagacccctcaccagatcaggatgccagtgtcagtg
gcagccaagggcatttcacagacagtggtttctgtgcctctgaggagtcagtctgctagc
agtccagttcaggtgccgacaactctgtctgtgtctgctgtaactgtggccaaacctcca
actggatcacctggtagcccggctaacaaccctgcttctcctgctgtgctgcaaggagtt
gccagcccgaacatcaaacaggtgtccatcacaggacaactgggaatgaagactccagga
ggagcaggaattccaataacagctacaaaccttcgcattcagggtaaagatgtcctacgt
cttccaccatcttccatcaccacagacgctaaaggccagacggtgctgagaattacccca
gacatgatggcaactcttgccaaatccccagtcgcaactgtcaaactcactcctgacttt
ctgggcactgccacctcaggcagcaagagcatatcagccactctccatgtgacgccgccc
catcattcaccttcctccgccacaagtgctacatcctgcactggtgacgtacagaccact
aaagcaggccccgttgcctccaccttgttgaaggctgcaggagacacagccatacgtctg
atgccaacattggctgtcacgactgaccaaaaatctaggaccttctccaccgtgacctcc
cctgacaagagtggcgccaccattcggataatgccaggtcttggtgtaattccacagaaa
cagggtcagaccatcacgatgacaaccaccactggcagtaaaccactcacagcgacttca
tgtgctaatgtagtgaccatggctgccagtgttgtagctggtgctaaagggatcacagtg
gctcctggagcctcgggctcacccttgacgctaggaacagctacagctactgtgcgacag
gtccctgctacagtggttactacacaaacggggaagttacctgcacggatcactgtgccc
ctctcggtcctaaatcaaccactgaagagcaagagtgtagtgaccacaccaattgtgaag
ggaagtctcaatgcaaatatcagcagcctgggcaggaacattatcctgaccactatgcct
gctggcacgaagctgatcgcagggaacaaaccagtcagctttgtgacagcacaacagttt
cagcagcttcagcagcaaggacaggccacgcaggtccgcatccagacggttcaggcacag
cagctccagcagcacatggcaacaggttctcccaaatctgtctccacagttgtagtcaca
acagcaccttcacccaaatgtgctcccgatcccccgcctgcacctcaacagtga
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