Seriola dumerili (greater amberjack): 111235032
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Entry
111235032 CDS
T05606
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03013
Nucleocytoplasmic transport
sdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111235032
03015 mRNA surveillance pathway
111235032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111235032
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111235032
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111235032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111235032
NCBI-ProteinID:
XP_022619045
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MSEDSWALAVDVQEATTPSLQFDFSKKVDRVRGPRNMRGDINGNIVSEKSENGGWRRDAD
KVDLAEQSLLNKLIRRSLVRNRNQVEVLQRDPTSPLYSVKTFEELRLKPELLKGVYNMGF
NRPSRIQENALPMMLAQPPQNLIAQSQSGTGKTAAFSLAMLSHVNPANKWTQCLCISPTY
ELALQIGQVIEQMGKFCPDVKLAYAIRGNRMERGIKLQDQIVIGTPGTVLDWCTKYKLID
PKKITMFVLDEADVMIATQGHRDQSIRIHRQLTKDCQMLLFSATFEDSVWRFAEQVVPDP
NIIRLKREEETLDTIKQFYVLCKEKEDKFTALCNLYGSLTIAQAMIFCHTRKMAAWLTAH
LTKEGHQVALLSGEMTVEQRAAVIERFRNGKEKVLVTTNVCSRGIDVEQVSLVVNFDLPV
DMDGNADNETYLHRIGRTGRFGRRGFAVNMVDSKHSMDIINQIEMHFNRRITKLDTSNLE
EMESLMS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagactcgtgggcactggctgtcgatgttcaagaggctacaactccatcacta
cagtttgacttctccaagaaagtggatcgagtgcgtggtccacgtaacatgagaggagac
ataaacggcaacattgtgtcggagaagagtgaaaatggaggctggcgaagagacgcggac
aaagtggacctggccgaacagtccctgttgaataaactgatccgccgctctctggtgcgg
aacagaaaccaggtggaggtcctgcagagggaccccacctctcctctctactccgtgaag
acgttcgaggagctgagactcaaacctgagctgttgaagggtgtgtacaacatgggtttc
aacagaccatccagaatccaggagaatgctttgcccatgatgctggcgcaaccacctcag
aatctgatcgcccagtcacagtctggcacaggcaaaactgctgctttttctctggccatg
ctcagccatgtaaacccagccaataagtggactcagtgcctttgcatctcaccaacatat
gagctcgctctgcagattggtcaagtgatcgagcaaatggggaaattttgtccagatgtg
aagctggcgtacgccatacgaggcaacagaatggagcgaggcatcaagttgcaggaccag
attgtcattgggacaccaggcacagtcctcgactggtgcaccaagtacaagctcattgac
cccaagaagatcactatgtttgtgctggacgaggctgatgtgatgatcgccacgcagggt
catcgggaccagagcattcgtatccacagacagctgacaaaggactgtcagatgctcctt
ttctctgcaacctttgaggactctgtgtggaggtttgcagagcaggtggttcccgaccca
aacatcatcaggctgaagcgtgaagaggagacgctggacaccatcaagcagttctatgtt
ctctgcaaggagaaggaagacaagttcacagcactctgcaatctgtacggaagccttacc
attgcacaggccatgatcttctgccatactcgtaaaatggctgcttggctgactgcacac
ctgaccaaagagggccaccaggtggcgttgctgagtggagaaatgaccgtggagcagaga
gccgctgtcatcgaacgcttcaggaatggcaaagagaaggtgcttgtgaccacaaatgtg
tgctccagaggtattgatgttgagcaggtgtcacttgtggtcaactttgacctcccagtg
gacatggacgggaatgccgacaatgagacatacctgcaccgtattggccgcacaggacgc
ttcggcagaagaggatttgctgtcaatatggttgacagcaaacacagcatggatattatc
aaccaaattgagatgcatttcaacagaagaatcacaaaacttgacacgagcaatcttgaa
gaaatggaaagcctgatgagctga
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