Seriola dumerili (greater amberjack): 111235088
Help
Entry
111235088 CDS
T05606
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu02010
ABC transporters
sdu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111235088
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111235088
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdu02000
]
111235088
Transporters [BR:
sdu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111235088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
111235088
NCBI-ProteinID:
XP_022619168
UniProt:
A0A3B4TZ14
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MGFFRQLLLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSGGTLPWIQGIICNINNPCFHSPTPGEIPGQIGNFDNSILSRLFVDAQTVLSYSGNRS
FLGFQDLMESVQRLGERPGTWPTETVEDYMKANETLSTFLLTNGSMLPETVDQLMKARLN
MQVSVAGDQMQLKDLVCNASMLRQFLTVDGGEAVMNDLQTQLCSLPADILREAEHLFLSQ
LDFSKLFTRDRLMANAGDLRDISQAVTSASQELAVLIDDFTSLSSFAELSAALRLLSPEN
RTALPRESFRAFSRIMCGHPEAGGERIPSLNWYEDNDIKSFLGKNGTEDTDLDRNNSTTP
FCKSLIQGLESNPLSRIMWRGIKPLFIGKLLYTPDTPVVQQVMKEVNKTFEDLQILQEMN
EAWTEVGPRIKNYMETSVEIQMLQDLLRRPEVAVLVNLRLENTSWTASRIARFLDTPSPN
AHRNPGAPPSWLDIYNDISHIISTLAQVTECFSLNKLEGLETEGQLIDRALELLEDRQFW
AGVVFLLPNSSSPELPPHVTYKIRMDIDEVTRTNKIKDRFWDPGPAADPFNDMHYIWGGF
VYIQDLVERAVSRVLTGVEQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIVKGMVYEKEARLKETMRIMGLGTGTLWLSWFISSVVPFLVSAALLIALLKWGDILPYS
DPGVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLNT
THRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLRSSPVEGDSYSFTTSIIMLYVDAF
IYATAAWYIEAVFPGEFGIPRPWYFIFQINYWGGVPLEAGMPIPPAPSEQDEDHIEPEPS
NLVMGVSIRNLVKIYKKGGKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRHDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEDEVKSELD
TLLDDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSQLGSGYYLTVVKRE
GLDTSTPSSTSICTSTSSTNKLAPLKDSESSMSEDTGLGSEDSSSYLAALLSLAQHHIPG
ARLVEESGREAVINLPQTAAKNSSLAVFLSELDQRLTELGISSYGLSDSTLEEIFLRVAE
ETGVDAEPELQPESPHSRQPSSGQREEGQHAEQPETEPQETDLLSGDGRGGIPLTGWWLM
WQQLRALFVKRWLYTRRSRRGFFAQIVLPAVFVLIALLFSLIVPPFGKYPALQLQPWMYG
EQYTFFSNDAPGNPAMENLQEALLDKPGFGTKCMETEEEDNSTSPQCEAERGGLFMRPQI
SYSTWQMFSRGNWSRNRPSPECQCSTEDVRRMLPDCPQGAGGLPPPQIKRLTGDFLQNLT
SYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGSATQTLSQVHQFQDSVMAIRTR
YRVPQNSSLNHLLNRLPDFHGRLNSQNNVKVWYNNKGWHAVVSFVNVMNNGLLRASLPPG
PERRKHGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASFVLFLIEERV
SKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSETNLPALVLL
LLLYGWSITPLMYPASFVFTVPSTAYVVLTSINLFIGINGSIATFVLELFVDEHLNEVNR
ILKKVFLIFPHFCLGRGLIDMAKNQAMADAFRRLGTKQTLDPLQWDFVGKNLFAMAAEGV
IFFIFTILLQYKFFIRFRPWWTEPEMPPLGPEDEDVARERERVKSGKAQSDILTMTDLSK
VYKAGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTPITYGEAFLNHHSVLT
EMERVHQLMGYCPQFDAISDLLTGREHLELFARLRGVQEDSVAKVAQWGVKKLGLTQYAE
REAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVTREGRAVVL
TSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLVDINSNPDSCPIST
FMKNCFPSIELKERHHNVLQYQLPSHACCLARVFNVLANNYEKLGIIDFSVSQTTLDQVF
VNFAKEQTDDDSLTDVVISNGTVLTNLAALPTRINPPTIQPQPTITPPQQSKSKSPQHAK
SSDSKPKEGKSKQGKSSKGKSKESKASGEKSSSTAMTRLPPPEEKDKEMPQMSRKGSSGS
NSSNGGAQGESSKSSRSKHRGDSSSKNPSALFIVSSNTEDSAL
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcagacagctcttactcctgctctggaagaacatcacataccgcaggaga
aacaagatccagctgatcatcgagctcctctggccactcttcctcttcgtcatcctcatc
tctgttcgtcattcacaccctccttacaaacagagccaatgtcactttccaaacaaagcc
ttaccatcaggaggcaccttgccctggattcagggcattatctgcaacatcaacaacccc
tgtttccacagtccgacaccaggggagataccgggccaaattggcaactttgacaactcc
atactgtctcgtctctttgtggacgcccagactgttctgtcctacagtggaaaccggagc
ttcttgggctttcaggacctgatggagagtgtccagaggctgggagagcgtcctggaacc
tggccaacagaaacagtagaagattacatgaaagccaatgagacgttgtccacctttcta
ctgaccaacggcagcatgttgcctgagaccgtggaccagctgatgaaggctcgtctaaac
atgcaggtttctgtggctggagatcagatgcagctgaaggacctggtgtgtaatgcgagc
atgttaagacagtttctgacagtggatggaggagaagctgtcatgaatgatcttcagact
cagctgtgtagcctgcctgctgacatcctgcgagaagccgagcacctttttctctcccag
ctggacttcagcaagctcttcacgagagaccgtctgatggccaacgctggagaccttagg
gacatcagtcaggccgtcacctcagcttcccaggaactggcagtcctcatagatgacttt
acctccctctccagctttgcagaattgagcgcagctcttcgtcttctgtctccagagaat
cgcacagcgctgcctagagagagtttccgagctttttcaaggatcatgtgcggtcaccct
gaggctggtggcgaacgcatcccgtcactcaactggtacgaggacaatgacatcaagtcc
ttcttaggcaaaaacggcactgaagacactgacctggaccgtaacaacagcaccactcct
ttctgtaaaagtttgatccaggggctggagtccaaccctctgtcccgcattatgtggcga
ggaatcaaacctctctttattgggaaactgctgtatacaccagacactcctgtagtacaa
caagtcatgaaagaggtgaacaaaacctttgaggacctccagatcctccaggagatgaat
gaagcctggacagaggtgggaccgcgcatcaagaactacatggagaccagtgtggagatt
cagatgctgcaggatttgttgaggcggccagaggttgcagtattagtcaacctgcgtttg
gagaacacgtcctggacggcctcacggatcgctcgtttcttggacacaccctctccaaac
gcccatcggaatcctggggcaccaccttcctggctggacatctacaacgacatcagccac
atcatcagcactcttgcacaagtcactgagtgtttctctctgaacaaactggaggggctg
gagactgagggtcagttgattgacagagcactggagctactggaggacaggcagttttgg
gcaggtgtggttttcctgctgcccaattcttcatctcctgagctgccgccccacgttacc
tacaagatccgaatggacatcgatgaagtgactcggaccaacaaaatcaaggacaggttt
tgggatcctggcccagcagccgacccgtttaatgacatgcattacatttggggcggcttc
gtgtacatccaggacctggtagagagagctgtgagccgagtcctgaccggagttgagcag
actacaggcatctacatccagcagatgccttacccctgctatgtggacgatgttttccta
cgagtgctgaaccgctccctgccactcttcatgactttggcctggatctactcagttgcc
atgatcgtcaaaggtatggtgtacgagaaggaggcgaggctgaaggaaaccatgaggatt
atgggtctgggaacaggaacactgtggctcagctggttcatcagcagcgtggttcctttc
ctggtctctgcagcacttcttattgctctgctcaagtggggggacatcttgccttacagc
gacccaggtgttgtctttttcttcctcatggcatttgccaccgccaccatcatgcagtgt
ttcctcatcagtaccttcttctccaaagccaacctggctgctgcctgtggggggctcata
tactttagcctctacctgccctatgtactgtgtgtcgcctggagagaccacctcaacacc
acacacagagtccttgctagttttctttctcctgtggcatttgggtttggctgcgagtat
ttctctcagtatgaggagcaaggtgtgggcatccagtggtacaacctgcgctccagccct
gtggaaggagactcctacagcttcactacatctataatcatgctttacgtggacgccttc
atctacgccactgcagcctggtacatcgaagccgtgttccctggtgaatttgggatcccc
agaccttggtatttcatcttccagatcaactactggggtggagttcccctggaggcaggc
atgccgatcccaccggcaccttcagagcaggatgaagatcacattgaaccagaacccagt
aacctggttatgggcgtgagcatcagaaacctggtgaaaatctacaagaaggggggcaaa
ctggctgtcaaccacctcaacttgaagttctatgagggacagatcacctcattccttggc
cacaacggagctggcaagaccaccaccatatctgtcctgacgggcctgttcccacctacc
tctgggaccgtgtatatcaagggaatggatattcggcacgatatggacatcatccgaagg
acactgggagtttgtccacaacacaatgtcctgtttgacatactaacagtggaggagcat
gtgtggttttatgggtgtctcaagggtttgtctgaagatgaggtgaaatctgagctggac
actcttctggacgacgttggcttgttgcacaaacgacacgaacagaccaaaaacctctct
ggtggcatgcagaggaagctgtctgtggcgatagcattcgttggaggatccaaggtggtt
gttctggatgaacctacagctggggttgatccttactcccgcagaggaatctgggatctg
ctgctcaaataccgcaaagaccgaactatcatcttgtccactcactacatggatgaggca
gagctgttaggtgaccggatcgccatcatatctcagggaaagctctgctgctgcggctca
ccgctcttcctgaaatcccagctgggatctggttattacctcactgtggtgaagagggag
ggactggacaccagcactcccagcagtaccagtatctgcaccagcaccagcagcaccaat
aagctggctcctctcaaggacagcgagtcatccatgagtgaagacaccgggctgggaagc
gaggacagcagctcatacctggcagcgttgctctccctggcacagcaccacatcccaggt
gcgaggctggtggaggagtcagggcgtgaggcggtgatcaacctgccgcagacagctgct
aagaacagcagcctggcggtctttctgtcagaactggatcagaggctgactgagctgggc
atcagcagctacggcctttcagacagcacactggaagagatctttctgcgagtggcggag
gaaacaggtgtggatgctgaacctgagctgcagcctgaatctccccacagccgacagcca
tcaagtgggcaaagagaggagggacaacatgctgaacaaccagagacagagcctcaggag
acggacctgttgagtggagacggccgaggtgggatccccctgaccggctggtggctgatg
tggcaacagctgagggctctctttgtgaaacgctggctttacactcggaggagccgcagg
ggcttcttcgctcagattgttctgcctgctgtgttcgtcctgattgcccttctcttcagc
ctcattgtccctccatttgggaagtaccctgccctgcagctgcagccctggatgtatgga
gagcagtacaccttcttcagcaacgacgccccagggaacccagccatggagaacctgcaa
gaagctctgctggacaagccaggttttggtaccaagtgtatggagacagaggaagaggac
aacagcacgagtcctcagtgtgaagctgagcggggtggcctgttcatgcggccacagatt
tcttactccacatggcagatgttcagcagaggcaactggagcagaaatagaccctctcct
gaatgtcagtgtagcacagaggacgtccgccggatgctccctgactgcccgcagggtgca
ggtggcctgccacctccgcagattaagaggctgactggagacttcctccaaaatctgaca
agttataacatttccgattacctggtgaaaacctactctcagatcctcaagaaaagcctg
aaaaccaagaagtgggtgaatgaattcagatatggaggtttctccctcgggggcagcgcc
acccagactttatctcaggtccatcagttccaagactcggtcatggcaatcaggactcgt
tacagagttccacagaacagttcactgaatcatcttcttaaccgactgccggattttcat
ggaagactgaacagtcaaaacaacgtcaaggtgtggtacaataacaaaggttggcatgcc
gtggtgtcatttgtcaacgtgatgaacaatggcctgctgagagcgagcctaccaccaggt
ccagagaggaggaagcacggcatcaccgcctacaatcacccgctcaacctcaccaaggag
caactcaccgaaatggccatgatgaccacatcagtggatgttctggtttccatttgcgtg
atctttgccatgtcctttgtgccggcaagtttcgtcctttttctgatcgaggagcgagtc
agcaaagccaaacaccttcagtttgtcagcggggtcaaaccgatcctctactggctggcc
aacttcacctgggacatgttgaactacaccgtcccagccaccatggttgtgctgatcttc
atctgtttccagcagcagtcgtatgtttctgagacaaacctgcccgctctcgtcctgctg
ctccttctctatgggtggtccatcacccctcttatgtacccagcatcctttgtgttcacc
gtcccgagcacggcctatgtggttctgacttccatcaacctcttcattggaatcaacggc
agcatcgccaccttcgtcctggagctgtttgtagacgagcatctgaacgaggtgaaccgg
attctgaagaaggtcttcctcatcttccctcatttctgtctgggccgaggactcatcgac
atggccaaaaatcaggccatggcagacgccttccggagactgggcaccaaacagactctg
gatcctctccagtgggattttgtaggaaagaacttgtttgcgatggcagctgagggcgtt
atcttcttcatcttcaccatattgctgcagtacaagtttttcattcgtttcagaccatgg
tggactgaacctgagatgcctcctcttggtccagaagacgaggatgttgccagagagaga
gagagggtcaaaagtggcaaagcccaatcagacatcctcaccatgacagacctgagcaag
gtttacaaagcaggtaggaagccagcagttgatcgtctctgccttgggattccccgtggt
gagtgtttcggcctgctgggggtaaacggagcagggaagacgtctacatttcgcatgctg
actggagacacacccatcacctatggagaggctttcctgaaccaccacagtgtgttgaca
gagatggagagagtccaccagctgatgggttactgtccacagtttgacgccatcagcgac
ctgctgacaggtcgggaacatctagagctgttcgcccgcctgcggggagttcaagaggac
tctgttgccaaggtggcgcagtggggtgtgaagaaactgggcctgacgcagtatgctgag
cgggaggccggaggctacagcgggggcaacaagaggaaactctccactgctatctccctc
attggagctccacctgttatattcctggatgagcccaccactggtatggacccaaaggcc
aaaaggtttttgtggaactgcatcctcagcgtcaccagagaaggaagagctgtagttctc
acctcccacagtatggaggaatgtgaggctctgtgcaccagaatggccatcatggtcaac
ggcaggttccaatgtctggggtcggttcaacacctgaagaacaggtttggcgatggatac
accataatccttcgtctggtagacattaactccaacccagactcatgtcccatcagcacc
ttcatgaagaactgttttcccagcatcgagctgaaggagcgtcaccacaacgtgctgcag
taccagctgccctcacacgcctgctgcctggctcgtgtcttcaatgtgttggccaacaac
tatgagaagctgggcatcatcgacttctctgtttcacagaccaccttggaccaggtgttt
gtcaactttgccaaagagcagactgatgacgacagcctaacagatgtcgtcatcagcaac
gggacagtactgaccaacctggctgcactgcccactaggattaaccctcccaccatccaa
ccacaaccgacaatcacaccccctcagcaaagcaagagcaagagtccacagcatgctaaa
tcatctgacagcaaaccgaaagagggtaaatcaaaacagggtaaatctagcaagggtaaa
tctaaagaaagcaaagctagcggagaaaaaagcagcagtacggccatgacgagattacct
ccgccagaggagaaggacaaggagatgcctcagatgagccggaagggcagcagtggatca
aacagcagcaatggaggagctcagggagaatccagtaaatccagtaggtccaaacacaga
ggagacagctccagtaaaaatccttctgcactttttattgtcagcagcaacacagaggac
agcgcactgtga
DBGET
integrated database retrieval system
