Seriola dumerili (greater amberjack): 111235167
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Entry
111235167 CDS
T05606
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111235167
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Others
Others
111235167
Endosome - Lysosome transport
111235167
Endosome - Golgi transport
111235167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
111235167
NCBI-ProteinID:
XP_022619224
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MQLEARVTRKSEEDKISPKDDNCTKVFNAFATDAVGALKNGKQVGTETQSGPTGIETAPN
YNSRLKIPIKKYDNISEDIQMRPAATVSPRRKAKRSVGPTYSENVDRSISGEAQSGERFV
ENVQGVSNSRAEYRRTGEEARGSNPRQSEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVI
LILTKLYDFNLGAVTESSLWRSSDYGSTYNKLNDKVGSRTVLSYLYVCPTNKQKIMMLSD
PEVESAVLISSDEGASFEKHPINFNILSLLFHPAQENWILAYSHDSKLYSSMDFGRKWQL
VHDNVMPGRFYWAVMGLDKESDVVHIETRIAKGRAQYVKCRAQRCTDGNRQYLFPGHVDT
NSLVVQDEYVFTQVTKSGRASYFVSYMRESFKRMKLPKYCLPKDMHIISTDEKQVFAAVQ
EWNQNNTYSLYISDSPGVYFTLSLENLRTSRGPAGNLLVDFYKVEGINGMYLANKLVDNH
IKTFITYNKGQTWALLPGPSTDVAGNNLHCILPFCSLHLHLEMLENPYTSGPITSKKSVP
GIIVATGNIGTELSSTNLGMFITSDAGNSWRQIFDEEHNIWFLDNGGALLAVLHAATPIR
HLWISLDEGKKWDRHSFSLAPLYVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGL
FSRRCMDGDYQTWHLHNKGELCVMGERQIFMKRRPGNRCMLVQDYSRIYSSEPCLCTTYD
FECDYGWERQADGKCSPAFWFNPNGAAKSCSSSQSFLNSTGYRKVLSNNCKEAGRNVYSP
RRQACRPRPPRGLRLSTNQGELSAPVGSNVTFMVYLEDGDSLRTSIQLDFGDGIKITYSN
LSRTDDGIMHIYRTTGIYRVTASAENSQGSDSSTLFLHITSPVERVYLSVPIVAIRGKEA
NLTAVVWPSHTRTLTFFWWFDNSSEPIITLEGSISYTFQREGKNKVTVQVASGSTVMQDS
KVITVKEFFRSLLLSFSPALDEHNPDIPEWREDIGRVVRAALSQVSGFPRDQLLVSLYPG
LPTTAELFILPDEHTASEHKRGSEEALETISDIFVTALNQGLIQFELKADTRIIVYMTQQ
TLAPLVDSNSIHSGSAMLMLLTVVFVGLAAFFIYKFKRKIPWIHVQTEDSHEKEPEVIST
VGQNDNMSKVKLTEFPSPKELMAKDLEARSRGGIGRNMERIVTREFPNCTNV
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggaagcacgtgtaacccgaaaatcagaggaggacaaaatctcacccaaagac
gacaattgcacaaaagtttttaacgcttttgcaacggatgctgtcggtgctttgaaaaat
ggcaagcaagtgggaactgaaacacagagcggaccgactggcatcgaaacggcaccaaac
tataacagtcgtctcaaaatacctattaagaagtatgataacatttccgaggacatccaa
atgcgacctgcagcgactgtttctccaagaagaaaggcaaaaaggagtgtgggtccaaca
tacagcgaaaatgtggataggagtataagtggagaagcgcagtcaggagagaggtttgtg
gagaatgtgcaaggtgtttccaactccagagccgagtaccggcgcaccggggaagaagcc
agagggtctaacccgagacaaagtgagcctcacctggacacttctacctttgctctgtcg
ggagactcggcgcacaaccaggcgatggtgcactggtctggacacaacagcagcgtgatc
ctgatcttgactaagctgtatgacttcaacctgggggctgttaccgagagctcgctctgg
agatccagtgattatggaagcacctacaacaaactcaatgacaaagtgggttcaaggaca
gttttaagttacctgtacgtctgccctaccaacaaacagaagataatgatgcttagcgac
ccagaggtagagagcgctgtcctcatcagttcagatgaaggggcaagctttgagaagcat
cccattaacttcaacatcctgagcctcctcttccacccggcacaggagaactggatactg
gcttacagtcatgacagcaagctgtacagctcaatggactttgggaggaaatggcagctt
gttcacgacaacgtgatgccaggccgattctactgggcggtaatggggctggacaaagaa
tcagatgtggtccacatcgaaacgcgcatcgcaaaaggccgcgctcagtacgtgaagtgc
agagcccaacgctgcacagatggcaacagacagtacctctttcctggacatgtagacacc
aactcactggttgtgcaggatgaatatgttttcacacaggtgacgaagtcaggacgagcc
agctactttgtctcctacatgagagaatccttcaagcggatgaagttacctaaatattgt
ctaccaaaggacatgcatatcatcagcacagatgagaagcaggtctttgctgcagttcag
gagtggaatcagaacaatacttacagcctgtatatctcagactcccccggggtctacttt
accctttcattagagaatctgagaaccagccgaggacccgctggtaacctactggtggac
ttttataaggttgaggggataaatggcatgtatctcgccaacaaactggtggataatcac
atcaagacttttatcacctacaacaagggacaaacatgggcccttctgccaggtccttcc
actgatgtggctgggaataaccttcactgcattctgccattttgttcgctgcatcttcat
ctggagatgttggagaatccctacacgtctggacccatcaccagcaaaaagtctgttcca
ggaatcatcgtggctacagggaatattggaacagagctgtcctccaccaaccttgggatg
tttataacatctgatgcaggaaatagctggagacagatttttgatgaagagcacaacatt
tggttccttgataatgggggggctttgctggcagtcttacacgcagcgacgccgattcga
cacttatggatcagtctcgacgaaggaaagaagtgggaccgtcacagtttctccttggca
cctctgtatgtggatggggttttaatggagccagaatctgacaatcacattatcactttc
tttggacacttcagccatcggtcagagtggcagctgatcaagatcgattacaagggcctc
ttcagcaggagatgcatggatggagattatcagacatggcacctgcacaacaagggagag
ctgtgtgtgatgggcgagaggcagatctttatgaagcgcaggccaggcaaccgttgcatg
ctggtccaggactattccaggatctattcctctgagccgtgcctctgcacaacctatgat
tttgaatgtgattatggatgggagcgccaggcggatgggaagtgctcccctgctttttgg
tttaatccaaatggtgcagctaaaagctgtagttccagccaaagcttccttaacagcaca
gggtaccggaaggttttgtccaataactgtaaggaggcagggaggaacgtgtactcgccc
aggaggcaggcttgtcgtcccagaccaccccgaggcctccggctctcgaccaatcaagga
gagctcagcgccccagttggcagtaacgtcactttcatggtctacctcgaagacggagac
tcgctgaggaccagcatccagctagactttggggacggcatcaagatcacgtactctaac
ctgagcaggactgatgatggcatcatgcacatctacagaacgactgggatttaccgagtg
acagcttcagctgagaacagccagggatctgacagcagcacactgtttttacacatcacc
agtcctgtggagcgtgtatatctctccgttcctattgtagccatcagggggaaggaggct
aatctgactgcggtggtttggccgagtcacaccagaacattgaccttcttctggtggttt
gacaacagctccgagcccattataaccttggagggaagcatctcatacacgtttcagaga
gaggggaaaaacaaggtcacggtccaggttgcttctgggagcaccgtaatgcaggattca
aaagttataactgttaaagagttcttcaggtcgctgctgttgtcgttctcgccagcgctt
gatgagcacaatcctgacatccccgagtggagggaggacataggccgtgtggtgcgggca
gctctgtcacaggtgtctgggtttcctagagatcagctgctggtctctctgtacccagga
cttccaactacagcagagctctttatcctgcctgatgagcatacagccagtgagcacaag
agagggagcgaggaggctctagagacgatatcagatatttttgtcactgccctgaaccaa
ggcctgatccagtttgagttgaaagctgatactcgcattattgtgtacatgactcagcaa
actctggcaccacttgtggattcaaactccatccacagtgggtcggccatgctgatgctg
ctcactgtggtgtttgtcggtctagccgcattcttcatctacaagttcaaaaggaaaatc
ccctggatccatgtccagactgaggacagtcatgagaaagaaccggaagtgatcagtaca
gtcggtcagaacgacaacatgtccaaggtgaagctcactgagtttccctctccaaaagaa
ctcatggcaaaggacctggaggccaggagcagaggagggattggaagaaatatggagaga
attgttacaagggaatttccaaactgtactaatgtctaa
DBGET
integrated database retrieval system
