Seriola dumerili (greater amberjack): 111235223
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Entry
111235223 CDS
T05606
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdu03009
]
111235223 (rrp12)
Ribosome biogenesis [BR:
sdu03009
]
Eukaryotic type
90S particles
Other 90S particles
111235223 (rrp12)
Pre-60S particles
Other pre-60S particles
111235223 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
111235223
NCBI-ProteinID:
XP_022619336
UniProt:
A0A3B4VML4
LinkDB
All DBs
Position
Unknown
AA seq
1287 aa
AA seq
DB search
MVKSGKLRSGTGSKLKRWKKGHSSDSNPQTSRFRQAAKSRFFSRPTGNGDLTVDALKLHN
ELQTGPLELSAGSRKDAFMEEEPDEALSERTSGTFLSGLSDCSNLTFRKVQRFWESNSAA
HKEICAVLAAVTEVIRGQGGKETETEYFAALMTTLEVVESGESQAAVAYLLNLVMKRVPA
PVLMSKFSDTTKALMDVMSKQATSETASALRWILSCLATLLRKQDASVWTYPSTLQAYHG
LLSFTVHSKPKVRKAAQQGVCAILRGSDFLFTDNAPTHHPAAVTTAKFCIKEMEQAGGSK
EDTTTLHVLGLLKELMGTFPLGAVKSCCETLLRVMTLSHVLVTASAMQAFHKLFSGKPNA
STLSPELNAQIITALYDYLPSENDLQPLLAWLAVMEKAHIHLAGLQSSLSLGHLPRLFSA
AMSCLLSPHTQVVSAATNTLKTLLTECISPCLDEMGVISATASAGNPSYVCKMFRIIEEG
LSYRFHASWPFVLQILGCFYRAAGKQAHPIMTKSLQSLADLRSTPQFPFSGELDLAVGGA
VESMGPEVVLGAVPLNITGFNDDLEFPRSWLVPVIRDHVKNTHLGFFASYFLPLASTLKQ
RAEELEQAGQKLEAKVYQTLQLQIWTMLPGFCTCPVDLLASYKGIARTLGMAISERPDLR
LIVCQALRTIINKSCSTEEEKAEVGRFSKNFLPILFNVYSQQPAAGESGTYRMAILDTIK
VYLTVTETQMSCTFLQKATDRLSSTDTNEFTRLSMMDLVVAMAPFVDEVTMTKTFELIRP
YLEAKEPGMQKKAYRVLEEMCGGERDECRSFVVANLETLKVVLLETLKNASSPAKRPRLK
CLSHIVKRLGEEHKTFITALLPEVIICTKEVSVGARKNAYNLLVDIGKAFVRFCGNTKDA
MEQYLVLVYAGLTGSVTMITCTVLALTRLVFEYKDSIEVSTMEQLLHNVCVLLSSRTREI
VKAALSFIKVILFIMDPKTLASHVTVMMEGVGNITDDVRRHFRTKLKNIFTKFIRKFGFE
LVKSMLPAEHHKVLVNIRKAEARTKRRKQATEQHDDSESEEEAPKTKGESIEDILAESDS
DLSEDEGKAPKKAGKQQKGRAWLKEGEEDDPLNFLDPKVSQRVLATNPELRKSAKVEHGF
KVTSDGRLIIKEDEEEDVKDKDEGEMKDILEEAGVKSKKSQKRKFRDDNFDEDMDIEPQL
KYKAGGSGIHRPLGGSKDIGADYKSKKGKGDVKKQGKLDPYAYIPLKKAQLNRRKRAKLQ
GQFKGMVRGAQKGALSGKKMQKKKRKA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcgggtaaacttcgatctgggacagggtcgaaactcaaacggtggaagaaa
ggacacagtagcgactcaaacccgcagacgagccgctttcggcaggctgctaaaagccgc
ttcttcagccgacccaccggaaacggtgatctaacagttgatgctcttaaactacacaat
gagctgcagacaggtccgctggagctcagtgcaggcagccggaaagatgccttcatggaa
gaggagccagatgaggcgttatcagaaagaacctcaggcaccttcctcagcggcctgtca
gactgctccaacctgaccttcagaaaagtgcagcgtttctgggagtccaattcagctgct
cacaaagagatctgtgcagttttggcagctgttactgaggtgatccgaggtcaaggagga
aaagagactgaaacagagtactttgctgctttgatgaccaccctggaggttgtggaatca
ggagagtcacaggctgcggtggcgtacctcctcaacctcgtcatgaaacgggttcctgct
ccggtgctcatgtccaagttctcggacaccaccaaggctctgatggatgttatgtccaaa
caggccacatctgagaccgcctcggcccttagatggatcctgtcatgtctggccactttg
ttgaggaagcaggatgcatccgtctggacttatccgtccactcttcaggcttaccacggc
ctgctcagcttcacagtgcacagcaagcctaaggtccgtaaagcagcacagcaaggtgtt
tgcgccattctcagaggtagtgacttcctgtttacagacaatgcgccaacccatcaccct
gctgcagtgaccacagccaagttctgcatcaaagaaatggagcaggcaggaggcagcaaa
gaggacaccactacacttcatgtgctgggtcttctaaaggagttgatggggacgtttcct
ctgggagctgtcaagtcctgttgtgagactctgctgcgagtgatgacactcagccatgtg
ctggtgacggcgagtgctatgcaggccttccataagctgttcagcgggaagcccaacgct
tcgacgctctcaccggaactcaacgcacagatcatcacggctctgtatgactacctgccc
agtgagaacgacctgcagcctctgctggcctggctcgctgtcatggagaaggcacacatt
catttggcgggcttgcagagttctctgagtttgggtcacctccctcgcctcttctctgcc
gccatgtcctgcctgttgtcgcctcacacacaggtggtttctgcagccaccaacacacta
aagactttgttgactgaatgcatttccccttgcttggatgaaatgggcgtcatcagtgcc
acagcctctgcaggaaatccctcttatgtctgcaaaatgtttcgcatcatagaagaagga
ttgtcttatcgcttccatgcctcctggccgtttgtgctgcagatccttggctgcttttat
cgagctgcagggaaacaagctcaccccatcatgaccaagtccctgcagtctctggcagac
ctgcgctccactcctcagttccccttcagtggagagttggacctggctgtaggaggagct
gtagagagcatggggcctgaagtggtgctcggggctgtgcctctcaacatcaccggcttc
aatgatgacttggagttcccacggagctggctggtcccggtcatacgggatcatgtgaag
aacactcaccttggtttcttcgcttcttatttcctccctctggcctccacactcaagcag
agagctgaagagctggagcaagcaggacaaaaactggaagccaaagtctaccagacttta
cagcttcagatttggaccatgctccctggcttctgtacatgtcccgtagacctgctggca
tcctacaaaggcatcgcccgcacacttggtatggctatcagtgagcggccggacctgagg
ctgatagtgtgtcaggctctgcgcaccatcatcaacaagagctgctccacagaagaagaa
aaggcagaagtgggccgcttctcaaagaacttcctgcccatccttttcaacgtgtacagc
cagcagcctgcagctggagagtccggcacctacaggatggcgatcctggacaccatcaaa
gtctacctaactgtcaccgaaacgcagatgagctgcactttcctgcaaaaagccacagac
agactgagcagcacagacaccaatgagttcacacgcctgtccatgatggaccttgtggtt
gccatggctccctttgtagatgaggtcaccatgactaaaacctttgagctgattaggccg
tatttggaggctaaagagccgggcatgcagaagaaggcgtaccgtgtgctggaggagatg
tgcggaggagagagggatgagtgtagatcttttgtcgtggctaacctggaaaccctcaaa
gtcgtcctgctcgagactctgaaaaacgcgtcttcaccagcaaagaggccgagactgaag
tgtctgagccacatcgtgaaaaggctcggcgaagaacacaaaacctttataaccgcactg
ctgccagaggtgattatatgtacgaaggaggtttctgtcggtgctcgtaagaacgcctac
aacctgctggtggatataggaaaggcttttgttcgcttttgtgggaatacaaaagatgcc
atggagcagtatctggtgttggtgtatgcaggactcacaggctccgtcaccatgatcacc
tgtacagtgttggcgctaactcgattagtgtttgagtacaaagactcgatagaggtgagc
accatggagcagctgctgcacaatgtctgtgtgctgctgtcgtcccgtacgagggagata
gtcaaagcagcactgagcttcatcaaggtcatcctcttcatcatggatcccaagacgctg
gcttcacatgtcactgtcatgatggagggcgtggggaacatcacggatgatgtgaggagg
cacttcagaacgaaactgaagaacatcttcactaagttcatcaggaagtttggtttcgag
ctggtgaagagcatgctgcctgcagagcaccacaaggtgctcgtaaacatccgcaaggct
gaggctcgcaccaagagacggaagcaggccacagagcagcacgatgactccgagagcgaa
gaggaggcgcctaaaacaaagggtgaaagtattgaggacatccttgcggagtcagacagt
gatttgtcagaggatgaaggaaaggctccgaagaaagcagggaaacagcagaaaggacgg
gcgtggctcaaagaaggagaagaagatgacccgctcaacttcctggatcccaaagtttcc
cagagagtgctagccaccaacccagagctgagaaagagcgctaaggtcgagcacggcttt
aaagtgacctcagatggacggctgatcattaaagaagacgaagaggaggatgtaaaagac
aaagacgagggagagatgaaagatattctagaagaggctggagtcaagagtaaaaagtct
cagaagaggaagttccgagacgacaactttgatgaggacatggacattgagccccaattg
aaatataaagctggaggctcaggtatccacagacctcttggaggtagcaaagacatcgga
gcggattacaagtcaaagaaaggaaaaggagatgtgaagaaacaaggaaagctggatcct
tacgcgtacatccctctaaagaaggcccagctcaatcgcaggaagcgcgccaagctacag
ggccagttcaagggcatggtgagaggagcccagaagggggcgctgtccggaaagaaaatg
cagaagaaaaagaggaaggcctga
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