Seriola dumerili (greater amberjack): 111235433
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Entry
111235433 CDS
T05606
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111235433 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
111235433 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
sdu04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
111235433 (fgd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
RHG20_PH
IBR
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111235433
NCBI-ProteinID:
XP_022619619
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MQLNRPRSALLGFSLPPPPPPPPPASFSSQFSTMRFSYHLSSTPPAHNSSSTCRTGPSSS
SSPSLLTKSLSLEPSCSPCGHQGVLDADTPQQPSSDPGPSFSSSGPASLEGGAGLTERRG
SAIGLLLVNDTGPPELPATTIAPLSKSRPPLPGPKPQVPPKPPHLQQQAGVSRPRPRAPE
KPLPPPPPCRPLPADPRGGRTLPTRADGTASPTCVLSLIEKFEREQIIVVPDITGGALCP
RLTDPPSSLSSSRPSSPPSSSSPAPPPYDEELPSEVKDHDEITEGVEEEEGKLHNDEDDE
DDDDDDEELVAACRDDLHQKRLSMESGYSASEKHLEDDQQPLDQSELPSERLSLPSSQTD
GKLANRDSGIDSISSPSHSEELCFAGVDDGVVAYPCSPALLPRLSSSSSYAGEGGEGEGE
GEEGDSDLEEEEAELTLVLPPPKTDRQDSAEMSVQQRVFNIANELLHTETAYVSKLHLLD
QVFCARLLEESRSRSSFPCDVVQGIFSNICSIYCFHQQFLLPALQKRMEEWDLNPRIGDI
LQKLAPFLKMYGEYVKNFDRAMELVNTWMERSAQFKAIIQEIQREERCGNLTLQHHMLEP
VQRIPRYELLLKDYLHRLPEDAPDYRDAQKSLELIATAAEHSNAAIRKMERMRKLLKVYE
LLGGEEDIVNPTNELIKEGHILKLSNKNGTTQDRYLILFNDRLLYCVPKLRLIGQKYGVR
ARIDVDGMELKETSSVAVPRTFLVCGKQRSLELQARTEDEKKDWIQAIQATIQRHEQTVE
SFRHLNCSLRDDESTPPHSPSCVELGKRAPTPIREKEVTLCMKCQEPFNSITKRRHHCKA
CGHVVCGKCSEFRARLSYDNNRTNRVCVDCYATLVGVLPSPATLTSSTQRRRSILEKQAS
LAAENSVICSFLHHMEKGGGRGWQKAWFVIPENEPLVLYIYGAPQDVKAQRSIPLIGFEV
SLPESCDRLERRHAFKISQSHLTLYFSAEGEELQRRWMDVLLRAGRGEEFQVHRPIVESL
EEEGEELAAAADCENT
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaccgacctcgcagtgccctgctcgggttcagcctcccacctcctcccccc
cctcctccccctgcctcgttctccagtcagttcagcaccatgaggttctcctaccacctg
agctccacaccaccagcacacaacagcagctccacctgcaggacaggtccctcctcctcc
tccagtcccagcttgctgactaagagtctctctctggagccgtcctgctctccgtgcggc
caccagggggtgctggatgctgacactccccagcagccgagctccgacccggggcccagc
ttctcctcctcaggccccgcctccctggagggaggggcggggttaacggagcgccgaggg
tctgctattgggctgctgctggtcaatgacacagggccgccggagctgccagctaccaca
atagcaccactgagcaagagccgaccgccgctgccggggcccaaacctcaggttccccca
aagcccccccacctccagcagcaggcaggggtgtcaaggccacgccccagggctccagag
aagcccctccctccgcccccaccttgtagacccctcccagcggacccccgagggggccgg
actctgccaacccgtgccgatggcactgcttccccgacctgtgtcctgtcactcatcgag
aagtttgagcgcgagcagatcatcgtggttcctgacatcactgggggggctctctgtccc
cgcttaactgaccccccctcctccctctcctcctctcgaccttcatcaccaccatcatca
tcatcccctgcccctcccccatatgatgaggagctgccctctgaggtcaaagatcacgat
gaaatcacagagggggttgaggaagaggaaggaaaactacataatgatgaagatgatgaa
gatgatgatgatgatgatgaagagctggtggcggcatgtcgtgacgacctccatcagaag
cgtctgtccatggagtcgggttacagcgcctcagagaaacacctggaggatgatcagcag
ccgctcgaccaatcagagctcccctcggagcgtctgtccctcccctcgtcacagactgac
gggaagctggccaatcgggacagcgggattgacagcatcagctctccgtcacacagcgag
gagctctgcttcgcaggtgtggatgacggggtcgtggcttatccctgcagccccgccctc
ctgccccgcctctccagctcgtcctcgtacgcgggggagggaggggagggggaaggagag
ggggaggagggagacagtgacctggaggaggaggaggctgagctaactctggtgctgcca
ccccccaagacagacaggcaggattctgctgagatgtcggtgcagcagagggtcttcaac
atcgccaacgagctgctgcacacagagactgcctatgtctccaagctccacctcctggac
caggtcttctgtgccagactcctggaggagtcccggtctcgctcctctttcccctgtgat
gtggttcagggaatattctccaacatctgctccatctactgcttccaccagcagttcctg
ctgccagcgctgcagaagcggatggaggagtgggatttgaacccacgaattggggacatc
ctgcagaagctggctcccttcctgaagatgtacggagagtatgtgaagaacttcgaccga
gccatggaactggttaacacctggatggagagatcagctcagttcaaggccatcatccag
gagatccagagggaggagcgttgtggtaacctgactctgcagcaccacatgttggagccg
gttcagaggatcccacgctacgagctgctgctcaaagactatctccaccggctgccagag
gacgccccagactacagggacgcccagaagtctctggagctgatcgctacagcagcagaa
cactccaatgctgccatcaggaagatggagcgaatgaggaagttgttgaaggtgtacgag
ttgctgggaggagaagaagacattgttaaccccactaacgagctcattaaagaaggacac
atcctcaaactgtccaataagaacgggaccacgcaggacagatacctcatactgtttaat
gacaggttgctgtattgcgtccccaagctgcgtctgattggtcagaaatacggcgtccgc
gctcgcatcgacgtggatggcatggagctgaaggagaccagcagtgttgcagtccccagg
acattcctggtgtgtggaaagcagaggtccctggagctacaggccaggacggaggatgag
aagaaagactggatccaggccatccaggcaactattcagagacatgagcaaaccgtggag
agcttcagacatctgaattgttctctacgagatgatgagtccacaccacctcactccccg
agctgtgtggagcttgggaagcgtgcgccgactccgatcagagagaaggaggtgactctg
tgtatgaagtgtcaggagccgttcaactccatcaccaagagacggcaccactgtaaagcc
tgtggacacgtggtttgcggtaaatgttcggagttccgtgctcgtctgtcgtacgacaac
aaccgcactaaccgtgtttgtgtggactgctatgccacactggtgggagtgctgccctcg
cccgccacgctgaccagcagcacccagaggaggcgatccatcctggagaaacaggcctcg
ctggcagcagagaacagcgtgatttgtagttttcttcaccacatggagaaaggagggggg
cggggctggcagaaggcatggtttgtcatccctgaaaatgagccgctggtgctctacatc
tatggagctccacaggacgtgaaggcgcaacgcagcatccctctgattggcttcgaagtc
tctctacctgagtcatgtgaccgcctggagagacgccacgccttcaagatctcccagagt
cacctgaccctgtacttcagcgctgagggggaggagctacagcggcgatggatggatgtc
ctgttgagggccgggaggggggaagagtttcaggtccaccggccaattgtggagagtctg
gaggaggagggggaggagctagcagctgcagcggactgcgagaacacgtga
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