Seriola dumerili (greater amberjack): 111235536
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Entry
111235536 CDS
T05606
Name
(RefSeq) CLIP-associating protein 1-B-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111235536
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111235536
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
111235536
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
111235536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
TOR1L1_N
Adaptin_N
Cnd1
Sec7-like_HUS
HEAT_DAAF5
ParcG
Paxt-1_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
111235536
NCBI-ProteinID:
XP_022619717
LinkDB
All DBs
Position
Unknown
AA seq
1522 aa
AA seq
DB search
MEEEVSMEYLLEQVMHNDVGKRLQVGQEVTELILDGEKSPELEQDQTTLDRMVEAVASSW
VNSSNFKVVLLGMDILSALVSRLQERFRTQVGTVLPSLIDRLGDAKDQVRDQDQALLLKI
MDQAANPQYVWERMMGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHICHLLGD
PTSQVRDGAMTCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVPSPVS
DKNFEDDDSVDGGRSSSSSKGASLSGKTMVSMGSFRRPASATSAKSAGRDKSGAGAVDEE
DFIQAFEDVPTVQIYSNREVEEAMTKIRDVLSDDKKDWELRVAALKKVRSLLLAGAAEFD
GFLQQLRLMEAAFKLSAKDLRSQVVREACITLGHLSLVLGVRFDHAAEAVMPTLLNLVPN
SAKVIATSGVAAIRLILRHTHFPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQSSSL
QRHGTVLMETIKKGVHDADAEARSVARKCYWSFHSHFSREAEHLFQGLEASYQKALQAHL
RSGDSLMSLPTSDRSSSSSQESLNRPLSVKSSAGSGSSRSKPGHASRTPAAASSQGSLQR
SRSDVDVNAAATATARTRMPAVPSAVPSASPFSSASALPPGSYASLGRVRTRRTSAGNGP
SVTDSRGRSRGKVVSQSQPGSRSGSPGRLLTSTYGRVPRPTMGTAAAAANSTSTSLTDKS
RPRGHRSQGCSRETSPTRSDRLSHQARISASVNAMRILNTGTEVEAAVADALLLGDSRSK
RRPVRRRFESPGMYSDDDANSDASSACSERSYSSRNGGMAPHYLRQTEDVAEVLNHCASA
NWSERKEGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFIIL
HRDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPYEQQFNILMRFIVDQT
QTPNLKVKVAILRYIEALARQMDPADFVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWA
GEDFSGRPGTVASLPGEGNLEERCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGTTK
LLHNHLRNASANSGIVMASPSNSAGRTPPRPPSSRSSPLTSPTNCSHGGLSPSMLEYDSE
NLNSEEIYSSLRGVTEAIQNYSFRSQEDLMEPLRRDGKRDGSSGVAASSDSDPRLGGDVT
EGGRTALDNKTSLLNTPSPRSFAGPRLRDYNPYNYTDTLDKAALKEALYEDAVEQLRDGR
RQESVENKILSPKSFPAGPAEQLELVGELLKELSQGQAGERGPEERRGTLLELLKVARED
SLVVWEEHFKTMLLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKALEA
HKDSHKEVVRAAEEAASTLASSIHPDQCIKVLCPIVQTADYPINLAAIKMQTRAIERITK
EPLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGSKMKLLN
LYIKRAQTSTSNSSSSSDISSY
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggtgagcatggagtatttactggagcaggtgatgcacaacgacgtgggg
aagaggctccaggtgggccaggaggtcacagagctcatcctggacggggagaagtccccc
gagctggagcaggaccagaccacgctggacaggatggtggaggcggtggccagctcctgg
gtcaactccagcaacttcaaggtggttttgctggggatggatattctgtcggctctggtc
agcagactgcaggagaggttcaggacgcaggttggaacagttctgcccagtctcatagac
cgactgggagacgccaaggaccaagttcgagaccaggaccaagcacttctgctgaagatc
atggaccaggcagcgaacccacagtatgtgtgggagcgaatgatgggaggcttcaaacat
aagaacaacaggaccagagagggactctgcctctgtctcatctccaccttaaatgtcttc
ggatctcagagtctgactctcagtaaaatagttcctcacatctgtcacctcctcggagat
cccacaagtcaggtgcgtgacggagccatgacctgcctcgtagagatctaccgccatgtt
ggagagcgagtgcggatggacctggggaagaagggtctgcctcagtcacggctcaacgtc
atcttcagtaaatttgacgaagttcagaggtcagggaacatggtcccgtcacctgtgtca
gacaaaaactttgaggacgatgactcggtggacggcggccgctcctcgtcctcgtccaaa
ggagcctcgctgtccgggaagacgatggtgagcatggggtcgttccgacgccccgcctcc
gccaccagcgccaagtctgcagggagggacaagtccggtgctggagccgtggacgaggag
gacttcatccaggcctttgaggatgttcccacagtgcaaatctactcgaacagggaggtg
gaggaggccatgacgaagatcagagacgtgctgtcagacgacaagaaggactgggagctc
agagtggcggcgctgaagaaggtgcgttcgctgctcctcgccggcgcagccgagtttgac
ggcttcctgcagcagctgaggctcatggaggcggcgttcaaactctccgccaaggacctc
cgctcccaggtggtgcgagaggcctgcatcactctgggacacctgtcgctggtgctcggc
gttcgcttcgaccacgcagcagaggccgtcatgccgaccctcctcaacctggtccccaac
agtgccaaagtcatagccacgtccggcgtggccgccatccgcctcatcctgcgacacaca
cacttcccacggctcatccccatcatcaccagcaactgtacctccaagtctgtggccgtg
aggagacgctgcttcgagttcctggacctgctgctgcaggagtggcagagcagctctctg
cagagacacggcacagttctgatggaaaccataaagaaaggagtccacgacgcagacgcc
gaggctcgctctgtggccaggaagtgttactggagcttccacagtcacttcagccgggag
gcggagcatctgttccagggcctggaggcgtcctatcagaaagctctgcaggctcacctg
aggagcggagacagtctgatgtcgctgcccacctccgaccgctcctcctcctcctcccag
gagagcctcaatcgacctctgtcagtgaaaagctcggctggaagcggctcgtccagatcc
aaacctggccacgcctccaggacgcccgcagcagcctcctctcaaggctccctgcagcgt
tctcgcagcgacgtggacgtcaacgccgcggccaccgccaccgcccgcaccaggatgccc
gccgtgccctccgccgtgccgtcagcttctcccttcagctcggcctcggccctccccccc
ggatcctacgcctctctgggtcgagtccgaacccggaggacgagtgcaggaaacggtccg
tctgtgacagacagccgtgggcggagccgagggaaagttgtctcgcagtctcaacccggg
agtcggtcaggttctccaggacgattgctgacctccacctacggcagagtccccagaccg
acgatgggcaccgccgccgccgccgccaacagcacctccaccagtctgaccgacaagagc
cgaccccgaggtcaccgcagccagggctgcagccgagagaccagccccaccagatcagac
cgcctgtcccatcaggctcggatctcggcctccgtcaacgccatgaggatcctcaacacc
ggcacggaggtggaggccgctgtggcagacgctctgctgttaggagactccaggagtaag
cggaggccggtgaggcggcgattcgagtcgccgggcatgtactcggacgacgacgccaac
agcgacgcctccagcgcctgctcggagcgctcctacagctcgcgcaacggcgggatggcg
ccgcactacctgcgtcagacggaggacgtggccgaggtgctgaaccactgcgccagcgcc
aactggtcggagaggaaggaggggctgctgggactgcagaacctgctgaagagccagagg
atgctcagtcgggtggagctgaagagactttgtgagatcttcaccaggatgtttgcggac
cctcacagcaagagagtcttcagcatgttcctggagactctggtggacttcatcatcctg
cacagggacgacctgcaggactggctgttcgtgctgctcacccagctgctgaagaagatg
ggggccgacctcctgggctccgtccaggccaaagtccagaaggcgctggacgtcaccaga
gagtctttcccgtacgagcagcagttcaacatcctgatgcgcttcatcgtggatcagacg
cagacgcccaacctgaaggtgaaggtcgccatcctgcgctacatcgaggctctggctcgc
cagatggacccggccgacttcgtcaactccagcgagacgcgcctcgccgtctcccgcatc
atcacctggaccaccgagcccaagagctccgacgtccgcaagaccctccataactgggcg
ggggaggatttctcaggccgacccggcaccgtggcctctctgcccggggagggcaacctg
gaggagaggtgcaagcaggcggcccaggtggtgctgatcgccctgtttgagctcaacaca
cctgagttcacgatgctgctgggagctctgcccaaaaccttccaggacgggacgaccaag
ctgctgcacaaccacctgaggaacgccagcgccaacagcggcatcgtcatggcgtctccc
agtaactcggccggtcggacgcctcctcgtccgccgagcagccgcagcagccctctgacc
tcgcccaccaactgctcccatggagggctttctcccagcatgctggagtacgacagtgag
aacctgaactcagaggagatctacagctccctgcgcggcgtcaccgaggccatccagaac
tacagcttccgcagccaggaggacctgatggagccgctgaggcgggacggcaagagggac
ggctcgtccggagtcgcggcgtcctcagactccgaccctcggctcggcggtgatgtgacg
gagggcggacgcacggccctggacaacaagacgtcactcctgaacactccctcgccgcga
tccttcgccgggccgcgcctccgcgactacaacccgtacaactacaccgacacgctggac
aaagccgccctgaaggaggcgctgtacgaggacgccgtggagcagctgcgagacggtcgt
cgacaagagagcgtggaaaacaagatcctgagccccaaaagtttccctgcgggccccgcc
gagcagctggagctggtcggggagctgctgaaggagctgtcccagggccaggcgggggag
cggggccccgaggagcgacgggggaccctgctggagctgctgaaggtggcccgcgaggac
agcctggtggtctgggaggagcacttcaagaccatgctgctgctgctgctggagacgctg
ggggacaaagaccacaccatccgcgctctggccctgcgagtcctgaaggagatcctgagg
aaccagccggcccgcttcaagaactacgccgagctcaccatcatgaaggcgctggaggct
cacaaggactcgcacaaggaggtggtgcgggcggcggaggaggcagcgtccacgctggcg
agctccatccacccggatcagtgcatcaaggtcctgtgtcccatcgtgcagacggccgac
taccccatcaacctggccgccattaagatgcagaccagggccattgaacgcatcaccaag
gagccgctgcaccagctgctgccggacatcatacctggactcctgcagggctacgacaac
acagagagcagcgtgaggaaggccagcgtcttctgcctggtcgccatctactctgtgatc
ggagaggagctgaagccgtacctggctcagctgaccggcagcaagatgaagctgctcaac
ctgtacatcaagagggcgcagacctccaccagcaacagcagcagctcctccgacatctcc
tcctactaa
DBGET
integrated database retrieval system
