KEGG   Seriola dumerili (greater amberjack): 111235829
Entry
111235829         CDS       T05606                                 
Name
(RefSeq) ribonuclease ZC3H12A-like
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sdu03019]
    111235829
Messenger RNA biogenesis [BR:sdu03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     111235829
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH zf-CCCH_4 zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 111235829
NCBI-ProteinID: XP_022620115
LinkDB
Position
Unknown
AA seq 625 aa
MNQVLPSQSSASGLLEPDSEEFQLRVDFFRKLGYSSTEVKAALRKLGLCTDTNSVLGELV
NNRTSSAPCMSSSESHDRSAGQKDPLLPPSWTLGPRITPQLGDRKNTDSELRPVVIDGSN
VAMSHGNKEVFSCRGIQLAVNFFLDRGHNTITVFVPTWRKEQARPDAPITDQHILMELEK
RKIVVFTPSRRVGGKRVVCYDDRFIVKLAYDSNGVIVSNDTYRDLQGERPEWKKCIEERL
LMYSFVNDKFMPPDDPLGRHGPSLDNFLRKNPLPTEQKRQLCPYDKKCTYGIKCKFYHPE
RANKSYLSLADELREKAQISIVKEDRNARLSPKQLQSDTGPAHNTCSHPRDSEFIGDRKN
SSNPRHGSGNKLVYSEDPGNSLNHMPCSGTGGQKDWPGLQLVQNHYYANISHEYLDSGLG
SFESQYSDHSHCHSNSHRLRSQQQSALAGPRHNSVHLGKNNTSHSCSCCSHAVSSTAHQQ
HHGNLDSMGKPNYPPQMFPPSVPQQRSLPSHLQYSGGTHYQQHYWSDPFQGQPQARTLCS
LSSSVHSSHSHDSCCSYKGHEYHPWGQQQPSSATFDPQRLELRKKLQAIFNPHEVDTVME
MFPHLMDAEKLAAKILNLKAQRGIF
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgaatcaggtacttcccagccagagctcagcttcaggcctgctggaaccagacagcgag
gagttccagctcagagtggatttcttcaggaaactgggttactcctccacagaggtgaag
gctgccctgaggaagctggggctctgcacagacaccaactctgtgctcggagagctggtt
aataataggaccagctctgcgccctgcatgtccagctctgaaagccatgacaggagcgca
ggccaaaaagaccctctgctgcctcccagttggaccctcggacctagaatcacaccacaa
ctgggggaccgaaagaacacagactcagaattgaggcctgttgttattgacggcagtaat
gttgccatgagtcatggcaacaaggaagtcttctcctgccgtggcattcagctggcagtg
aattttttcctggacagaggtcataataccatcactgtgtttgttcccacttggcgcaaa
gagcaggccagacctgatgcccccataacagatcaacacatactgatggagcttgaaaaa
cgtaaaatagtggtcttcactccatcgcgtcgagttgggggtaagcgggtggtttgctat
gacgaccgctttattgtcaagttggcgtatgactcgaacggcgtgatcgtgtccaatgac
acctaccgtgacctccagggcgaaagacctgagtggaagaaatgcatcgaggagaggctc
ctcatgtactcctttgtgaatgacaagttcatgccccctgatgatcctctgggtcgccat
ggccccagtctggacaacttccttaggaaaaaccctctgcctacagagcaaaagagacag
ctctgtccatatgacaaaaagtgcacctacggcatcaaatgtaaattttaccatccagag
agagctaacaagtcctacctgtccttggctgatgaactgagggagaaagcccagatttct
atagtaaaagaagacagaaatgccagattatcacccaaacagcttcagtctgatactggg
cctgctcataatacctgttcacatcctcgagactcagagttcattggagacagaaaaaat
tcttcaaatcccaggcatggtagtggaaacaaactggtgtactcggaggatcctggaaac
agtttgaatcatatgccctgttctggaacaggaggccagaaagattggcctgggctgcaa
ttggtgcagaatcattactatgccaacatctctcatgagtaccttgactccggtctcggc
tcttttgagagccagtactctgatcattcgcattgccacagcaactcccacaggctcagg
tcccagcagcaaagtgcactcgctggacccagacacaactcagtgcatttagggaaaaat
aacaccagccactcctgtagttgctgttcccatgcagtgtcctcaacagctcaccaacaa
catcatggaaacctggactctatgggtaagcccaactatcctcctcaaatgttcccgcca
agtgtgccacaacaacgcagcctccccagccatctccaatatagtggaggcacccattat
caacaacattactggtcagatccctttcaggggcagccccaagccaggacattgtgtagt
ctctcctcttcggtccattcctcacactcacacgactcttgctgctcttacaaaggccat
gagtaccatccctggggccaacaacagccatcctctgctacatttgacccacaaaggttg
gaactccgcaagaaactgcaagccatcttcaacccacatgaggtggatacagtcatggaa
atgttcccacatttgatggatgcagagaaactggctgcaaagatcctcaacctgaaggct
cagagagggatattctga

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