Seriola dumerili (greater amberjack): 111235829
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Entry
111235829 CDS
T05606
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111235829
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111235829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
111235829
NCBI-ProteinID:
XP_022620115
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MNQVLPSQSSASGLLEPDSEEFQLRVDFFRKLGYSSTEVKAALRKLGLCTDTNSVLGELV
NNRTSSAPCMSSSESHDRSAGQKDPLLPPSWTLGPRITPQLGDRKNTDSELRPVVIDGSN
VAMSHGNKEVFSCRGIQLAVNFFLDRGHNTITVFVPTWRKEQARPDAPITDQHILMELEK
RKIVVFTPSRRVGGKRVVCYDDRFIVKLAYDSNGVIVSNDTYRDLQGERPEWKKCIEERL
LMYSFVNDKFMPPDDPLGRHGPSLDNFLRKNPLPTEQKRQLCPYDKKCTYGIKCKFYHPE
RANKSYLSLADELREKAQISIVKEDRNARLSPKQLQSDTGPAHNTCSHPRDSEFIGDRKN
SSNPRHGSGNKLVYSEDPGNSLNHMPCSGTGGQKDWPGLQLVQNHYYANISHEYLDSGLG
SFESQYSDHSHCHSNSHRLRSQQQSALAGPRHNSVHLGKNNTSHSCSCCSHAVSSTAHQQ
HHGNLDSMGKPNYPPQMFPPSVPQQRSLPSHLQYSGGTHYQQHYWSDPFQGQPQARTLCS
LSSSVHSSHSHDSCCSYKGHEYHPWGQQQPSSATFDPQRLELRKKLQAIFNPHEVDTVME
MFPHLMDAEKLAAKILNLKAQRGIF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggtacttcccagccagagctcagcttcaggcctgctggaaccagacagcgag
gagttccagctcagagtggatttcttcaggaaactgggttactcctccacagaggtgaag
gctgccctgaggaagctggggctctgcacagacaccaactctgtgctcggagagctggtt
aataataggaccagctctgcgccctgcatgtccagctctgaaagccatgacaggagcgca
ggccaaaaagaccctctgctgcctcccagttggaccctcggacctagaatcacaccacaa
ctgggggaccgaaagaacacagactcagaattgaggcctgttgttattgacggcagtaat
gttgccatgagtcatggcaacaaggaagtcttctcctgccgtggcattcagctggcagtg
aattttttcctggacagaggtcataataccatcactgtgtttgttcccacttggcgcaaa
gagcaggccagacctgatgcccccataacagatcaacacatactgatggagcttgaaaaa
cgtaaaatagtggtcttcactccatcgcgtcgagttgggggtaagcgggtggtttgctat
gacgaccgctttattgtcaagttggcgtatgactcgaacggcgtgatcgtgtccaatgac
acctaccgtgacctccagggcgaaagacctgagtggaagaaatgcatcgaggagaggctc
ctcatgtactcctttgtgaatgacaagttcatgccccctgatgatcctctgggtcgccat
ggccccagtctggacaacttccttaggaaaaaccctctgcctacagagcaaaagagacag
ctctgtccatatgacaaaaagtgcacctacggcatcaaatgtaaattttaccatccagag
agagctaacaagtcctacctgtccttggctgatgaactgagggagaaagcccagatttct
atagtaaaagaagacagaaatgccagattatcacccaaacagcttcagtctgatactggg
cctgctcataatacctgttcacatcctcgagactcagagttcattggagacagaaaaaat
tcttcaaatcccaggcatggtagtggaaacaaactggtgtactcggaggatcctggaaac
agtttgaatcatatgccctgttctggaacaggaggccagaaagattggcctgggctgcaa
ttggtgcagaatcattactatgccaacatctctcatgagtaccttgactccggtctcggc
tcttttgagagccagtactctgatcattcgcattgccacagcaactcccacaggctcagg
tcccagcagcaaagtgcactcgctggacccagacacaactcagtgcatttagggaaaaat
aacaccagccactcctgtagttgctgttcccatgcagtgtcctcaacagctcaccaacaa
catcatggaaacctggactctatgggtaagcccaactatcctcctcaaatgttcccgcca
agtgtgccacaacaacgcagcctccccagccatctccaatatagtggaggcacccattat
caacaacattactggtcagatccctttcaggggcagccccaagccaggacattgtgtagt
ctctcctcttcggtccattcctcacactcacacgactcttgctgctcttacaaaggccat
gagtaccatccctggggccaacaacagccatcctctgctacatttgacccacaaaggttg
gaactccgcaagaaactgcaagccatcttcaacccacatgaggtggatacagtcatggaa
atgttcccacatttgatggatgcagagaaactggctgcaaagatcctcaacctgaaggct
cagagagggatattctga
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