Seriola dumerili (greater amberjack): 111235928
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Entry
111235928 CDS
T05606
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
111235928
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111235928
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111235928
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111235928
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111235928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
111235928
NCBI-ProteinID:
XP_022620224
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MAALRWEVLLFLAVVLLVSCNAAPSDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTEIPIDRETLRDCRNLFEGDKCFLEFEVSITDMVKGIGSGPRL
IEGRIEVMDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDRDSGTNGVAEYSLSTGP
DADQLFSLQVAVDTDEKLPQLVVMGNLDREKKDSYDLNIRVVDGGRPARASSALLRVTVT
DQNDNAPKFERTHYDAELPENSPLGHSVLQVRANDADTGINGEIDYSLHQASETVQRLLR
IDRSTGIIYVKGLVDREEENFLKFFVVAKDRGPNAKSSKVLVTVNVRDQNDNAPAIEIRG
IGLVTHQDGVANISEDMPIGTAVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNTPNFSPALL
EVDFAEGNQPGDKVLDVVATDADSGTNAELSYSIIELSATRLFEIDANSGEVRVKNLLDR
EETERYEFRVAAADKGVPSKTGTATVVINVLDRNDNDPKFMLNGYSFSVIENMPPLNPVG
VVTVTDADKGENARVRLFVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDAGD
PPRSSYVGVTINVLDENDNAPYVTKPSNSSYTYLTPVTPLDTRVEVVEAEDIDSGPNAEL
FYAITGGNPYGLFHISPSSGEITLVQEFNGKHNGLHRLVVRVSDKGKPPRHTTALVHIFV
NDTMSNVSLIEALVGHSIYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILVIVAVVV
IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQK
GLKFNLINDSVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTANQAQDLQDASQ
HSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVA
MTGNCTRECTEFGHSDSCWMPGQPSPNRKVSKNAPKLSTFVPYQEMDGQEQLMANGSPKP
LMMEERGTGVSNMRFMTPYSSAYPGGGDSSVKDCGLEEIPLSQAVEYHSATTPTGQTSKR
EIYL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgaggtgggaagtcctgttgttcctggcggtcgtcctgctggtctcctgt
aacgccgcaccctccgacatcctgtatcgggttccagaggagcagccgcccaacacgctg
attggcagcttggcggccgaccagggcctgcccgacaccggtcacctctacaagctggag
gtgggctcgccgtacctgcgggtggacggcaagacgggcgacatctacaccaccgagatc
cccatcgaccgcgagacgctgagggactgccgcaacctttttgagggcgacaaatgtttc
ctggagttcgaggtgtcgatcaccgacatggtgaagggcatcggctcggggccgcggctg
atcgaaggccgcatcgaggtgatggacatcaacgacaacacgccgcagttctcctcaccc
atcctcaccctctccatcccagagaacacgcacatcggcgccctcttctccatccccatg
gccaccgacagggactccggcaccaacggcgtggccgagtactcgctgagcaccgggccc
gacgccgaccagctcttcagcttgcaggtcgcggttgacacggacgagaagctgccgcag
ttggtcgtcatgggcaacttggaccgcgagaagaaggactcgtacgacctgaacatccgg
gtggtggacggtgggaggccggcgagggccagcagcgctctgctgcgggtcaccgtcacc
gaccagaacgacaacgcccccaagtttgagaggactcactacgacgccgagctgccggag
aacagcccgctgggacactcagtgctgcaggtcagagccaacgacgcagacaccggcatc
aacggggagattgactacagcctccatcaggcgtcggagaccgtccagaggcttctgcgc
atcgaccgctccaccggcatcatatacgtcaaaggcctggtggaccgcgaggaggagaac
ttcctcaagttcttcgtggtcgctaaagatcgcgggcccaatgctaagagctccaaggtc
ctggtgaccgtcaacgtcagggaccagaatgacaacgccccagccattgagatccgtggt
attggtttggtgacgcaccaggacggcgtggccaacatctctgaggacatgcccatcggc
accgcagtggcgttggtccaggtgtcggaccgtgacgagggggaaaatgcggtggttacg
tgcgtagttgccggtgatgtcccatttcagcttcgacctgcaagtgagtcagccaacgat
cggaagaggaagtacttcctgcagacgactaccctgctggattatgagcgtgttaaggat
tacaggattgaaattgtcgctgtggattctgggaacccagcgctgtccagcaccaactcc
ctcaaggtccaggtgacagacatgaacgacaacacgccaaacttttcccctgcgttgctc
gaggtggactttgcagagggcaaccagccaggcgacaaggtgctggatgttgtggcgaca
gatgcggacagtggcaccaacgcagagctgtcctacagcatcatcgagctctcggccacc
aggctcttcgagatcgacgccaacagcggggaggttcgtgtgaagaacctgttggatcgg
gaggagacggagcgttacgagttccgcgtggcggcagcagacaagggtgttcccagcaaa
accggcaccgctacagtggtgattaacgtcctggaccgcaatgacaatgaccccaagttt
atgctgaacggctacagcttctccgtcattgagaacatgcctccgctcaatcccgtcggt
gtggtgaccgtgactgatgctgataaaggtgaaaacgcccgagtgaggctgtttgttgaa
ccggacaatggcaagtttgtcatccagaacggcacaggaaccatcctgtccagcatctcc
ttcgaccgtgagaaggagagcacctacaccttccgtctgaaggctgtggatgccggtgac
cctcctcgatcctcctacgtcggcgtgaccatcaacgtcctagatgagaatgataacgcc
ccctacgtcaccaaaccgtccaactcctcctacacttacttgacacccgtcacgccactg
gacacccgtgtggaggtggtagaggctgaggacattgactctggacccaacgctgagctg
ttctacgccatcacaggcggcaacccgtacggcctgttccacatctcgccgagcagcgga
gagatcacactggtgcaggaattcaacggcaagcacaatggactgcaccgcctggtggtg
agggtcagcgataaaggcaaacctccccgccacacaaccgccctggtccatattttcgtc
aacgacaccatgtccaacgtctccctcatcgaagcgctggtcggacacagcatctacacc
cctctggacagggacattgccggagatcccaactacgcccttgctcagcgcagcaacatc
ctgtacggtagcctggcggggattgctggtgtgattctggtcattgtagccgtggtggtc
atcagacaccggctgcagaaggacaccaagagcggctaccaggccggcaagaaggagagt
aaggacctgtacgctccaaagcagggccccaagaacggcaaagggaaaaagagcaaaaag
gggaaagctccaaaacctgccaaaccgctggaggaggacgaggaggccagcttgcagaaa
ggcctcaagttcaacctcatcaacgacagcgtcaacgacagtcccagaatccacctgcca
cttaactacccgccaggaagccccgatctgggccgccactaccgctccaactccccacta
ccctccatccagctgcagccacagtcgccctccgcctccaagaagcaccaggccgttcag
gacctccccgccaccaacaccttcgtgggaaccggcgacaacaactccacaggctccgac
caatattcggattacagctacaaggccaacccgcccaaatacagcaacaaacagctcccc
caccgccgagtgaccttctccacggccaaccaggctcaggacctgcaggacgcgtcccag
cacagctactacgacagcggcctggaggagtcggagacccccagctccaagtcttcgtcg
gggccgcggatcggcccgctggcgctgccggaggatcactacgagcggaccacgcccgac
ggcagcatcggcgagatggagcacccggagaacgacctcaggcccctccccgacgtggcg
atgaccggtaactgcacccgcgagtgcaccgagttcggccactctgactcctgctggatg
cccggacagccctccccgaaccgcaaggtgtccaagaacgctccgaagctctccaccttt
gtgccttaccaggagatggacgggcaggagcagctgatggccaacggcagccccaagccc
ttgatgatggaggagcgcggcacgggtgtgtccaacatgcgattcatgacaccctacagc
agtgcctaccctggaggcggagactcgtctgtgaaagactgtgggctggaggagatcccg
ctgagccaggcggtggagtaccactcggccaccaccccgaccggccagacctccaagagg
gagatctacctgtga
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integrated database retrieval system