KEGG   Seriola dumerili (greater amberjack): 111235928
Entry
111235928         CDS       T05606                                 
Name
(RefSeq) protocadherin-1-like
  KO
K16498  protocadherin delta 1
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    111235928
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sdu01009]
    111235928
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sdu04515]
    111235928
Protein phosphatases and associated proteins [BR:sdu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111235928
Cell adhesion molecules [BR:sdu04515]
 Cadherins
  Protocadherins
   111235928
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Fibulin_C PDGLE
Other DBs
NCBI-GeneID: 111235928
NCBI-ProteinID: XP_022620224
LinkDB
Position
Unknown
AA seq 1204 aa
MAALRWEVLLFLAVVLLVSCNAAPSDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTEIPIDRETLRDCRNLFEGDKCFLEFEVSITDMVKGIGSGPRL
IEGRIEVMDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDRDSGTNGVAEYSLSTGP
DADQLFSLQVAVDTDEKLPQLVVMGNLDREKKDSYDLNIRVVDGGRPARASSALLRVTVT
DQNDNAPKFERTHYDAELPENSPLGHSVLQVRANDADTGINGEIDYSLHQASETVQRLLR
IDRSTGIIYVKGLVDREEENFLKFFVVAKDRGPNAKSSKVLVTVNVRDQNDNAPAIEIRG
IGLVTHQDGVANISEDMPIGTAVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDYERVKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNTPNFSPALL
EVDFAEGNQPGDKVLDVVATDADSGTNAELSYSIIELSATRLFEIDANSGEVRVKNLLDR
EETERYEFRVAAADKGVPSKTGTATVVINVLDRNDNDPKFMLNGYSFSVIENMPPLNPVG
VVTVTDADKGENARVRLFVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDAGD
PPRSSYVGVTINVLDENDNAPYVTKPSNSSYTYLTPVTPLDTRVEVVEAEDIDSGPNAEL
FYAITGGNPYGLFHISPSSGEITLVQEFNGKHNGLHRLVVRVSDKGKPPRHTTALVHIFV
NDTMSNVSLIEALVGHSIYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILVIVAVVV
IRHRLQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQK
GLKFNLINDSVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTANQAQDLQDASQ
HSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVA
MTGNCTRECTEFGHSDSCWMPGQPSPNRKVSKNAPKLSTFVPYQEMDGQEQLMANGSPKP
LMMEERGTGVSNMRFMTPYSSAYPGGGDSSVKDCGLEEIPLSQAVEYHSATTPTGQTSKR
EIYL
NT seq 3615 nt   +upstreamnt  +downstreamnt
atggcggcgctgaggtgggaagtcctgttgttcctggcggtcgtcctgctggtctcctgt
aacgccgcaccctccgacatcctgtatcgggttccagaggagcagccgcccaacacgctg
attggcagcttggcggccgaccagggcctgcccgacaccggtcacctctacaagctggag
gtgggctcgccgtacctgcgggtggacggcaagacgggcgacatctacaccaccgagatc
cccatcgaccgcgagacgctgagggactgccgcaacctttttgagggcgacaaatgtttc
ctggagttcgaggtgtcgatcaccgacatggtgaagggcatcggctcggggccgcggctg
atcgaaggccgcatcgaggtgatggacatcaacgacaacacgccgcagttctcctcaccc
atcctcaccctctccatcccagagaacacgcacatcggcgccctcttctccatccccatg
gccaccgacagggactccggcaccaacggcgtggccgagtactcgctgagcaccgggccc
gacgccgaccagctcttcagcttgcaggtcgcggttgacacggacgagaagctgccgcag
ttggtcgtcatgggcaacttggaccgcgagaagaaggactcgtacgacctgaacatccgg
gtggtggacggtgggaggccggcgagggccagcagcgctctgctgcgggtcaccgtcacc
gaccagaacgacaacgcccccaagtttgagaggactcactacgacgccgagctgccggag
aacagcccgctgggacactcagtgctgcaggtcagagccaacgacgcagacaccggcatc
aacggggagattgactacagcctccatcaggcgtcggagaccgtccagaggcttctgcgc
atcgaccgctccaccggcatcatatacgtcaaaggcctggtggaccgcgaggaggagaac
ttcctcaagttcttcgtggtcgctaaagatcgcgggcccaatgctaagagctccaaggtc
ctggtgaccgtcaacgtcagggaccagaatgacaacgccccagccattgagatccgtggt
attggtttggtgacgcaccaggacggcgtggccaacatctctgaggacatgcccatcggc
accgcagtggcgttggtccaggtgtcggaccgtgacgagggggaaaatgcggtggttacg
tgcgtagttgccggtgatgtcccatttcagcttcgacctgcaagtgagtcagccaacgat
cggaagaggaagtacttcctgcagacgactaccctgctggattatgagcgtgttaaggat
tacaggattgaaattgtcgctgtggattctgggaacccagcgctgtccagcaccaactcc
ctcaaggtccaggtgacagacatgaacgacaacacgccaaacttttcccctgcgttgctc
gaggtggactttgcagagggcaaccagccaggcgacaaggtgctggatgttgtggcgaca
gatgcggacagtggcaccaacgcagagctgtcctacagcatcatcgagctctcggccacc
aggctcttcgagatcgacgccaacagcggggaggttcgtgtgaagaacctgttggatcgg
gaggagacggagcgttacgagttccgcgtggcggcagcagacaagggtgttcccagcaaa
accggcaccgctacagtggtgattaacgtcctggaccgcaatgacaatgaccccaagttt
atgctgaacggctacagcttctccgtcattgagaacatgcctccgctcaatcccgtcggt
gtggtgaccgtgactgatgctgataaaggtgaaaacgcccgagtgaggctgtttgttgaa
ccggacaatggcaagtttgtcatccagaacggcacaggaaccatcctgtccagcatctcc
ttcgaccgtgagaaggagagcacctacaccttccgtctgaaggctgtggatgccggtgac
cctcctcgatcctcctacgtcggcgtgaccatcaacgtcctagatgagaatgataacgcc
ccctacgtcaccaaaccgtccaactcctcctacacttacttgacacccgtcacgccactg
gacacccgtgtggaggtggtagaggctgaggacattgactctggacccaacgctgagctg
ttctacgccatcacaggcggcaacccgtacggcctgttccacatctcgccgagcagcgga
gagatcacactggtgcaggaattcaacggcaagcacaatggactgcaccgcctggtggtg
agggtcagcgataaaggcaaacctccccgccacacaaccgccctggtccatattttcgtc
aacgacaccatgtccaacgtctccctcatcgaagcgctggtcggacacagcatctacacc
cctctggacagggacattgccggagatcccaactacgcccttgctcagcgcagcaacatc
ctgtacggtagcctggcggggattgctggtgtgattctggtcattgtagccgtggtggtc
atcagacaccggctgcagaaggacaccaagagcggctaccaggccggcaagaaggagagt
aaggacctgtacgctccaaagcagggccccaagaacggcaaagggaaaaagagcaaaaag
gggaaagctccaaaacctgccaaaccgctggaggaggacgaggaggccagcttgcagaaa
ggcctcaagttcaacctcatcaacgacagcgtcaacgacagtcccagaatccacctgcca
cttaactacccgccaggaagccccgatctgggccgccactaccgctccaactccccacta
ccctccatccagctgcagccacagtcgccctccgcctccaagaagcaccaggccgttcag
gacctccccgccaccaacaccttcgtgggaaccggcgacaacaactccacaggctccgac
caatattcggattacagctacaaggccaacccgcccaaatacagcaacaaacagctcccc
caccgccgagtgaccttctccacggccaaccaggctcaggacctgcaggacgcgtcccag
cacagctactacgacagcggcctggaggagtcggagacccccagctccaagtcttcgtcg
gggccgcggatcggcccgctggcgctgccggaggatcactacgagcggaccacgcccgac
ggcagcatcggcgagatggagcacccggagaacgacctcaggcccctccccgacgtggcg
atgaccggtaactgcacccgcgagtgcaccgagttcggccactctgactcctgctggatg
cccggacagccctccccgaaccgcaaggtgtccaagaacgctccgaagctctccaccttt
gtgccttaccaggagatggacgggcaggagcagctgatggccaacggcagccccaagccc
ttgatgatggaggagcgcggcacgggtgtgtccaacatgcgattcatgacaccctacagc
agtgcctaccctggaggcggagactcgtctgtgaaagactgtgggctggaggagatcccg
ctgagccaggcggtggagtaccactcggccaccaccccgaccggccagacctccaagagg
gagatctacctgtga

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