Seriola dumerili (greater amberjack): 111235966
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Entry
111235966 CDS
T05606
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111235966 (tdrd12)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
111235966 (tdrd12)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111235966 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
111235966
NCBI-ProteinID:
XP_022620263
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MLKISILKVENPSCLWGRVISGDTETTEQYDSLMVQMNLFYHDATQDLRKLKPTSIEEGQ
VCVVYWSVMKSWCRAVVESIIMDSVSCKARCVLIDHGERLVVPSDQIRVATEKFLQLPFW
VRRFHLAGIKPTTLRVSVFEEKAELTPSTQWDSSATLYLHNLLQASTWTEAVLLESESDS
TSIELYLTIGNVKICVNDDLVAKKFAYYSRESAENSGMDEVDRCPVMLSSNILTQTVSTI
SNTPAAQTQPAPVMSQGVVAAGAGDWLMAPSPPQSQHHELETGEGGGRSDVTGELTPGSQ
SKKSSDPAAAESDSSDDTDSSLAAALTKNLSLFKFLKFLNPGSSFQQAAHSVSQHEEPQD
CRETTAASSTCTGQEVSGTSVESEPAEAERTWRSEEDRACSRLLEWLNPEPLNPDPDAVD
DVVVPSDPRGSGILVHSAVPIEPCTSLDDAPVTDALRWVLRKKQYSALSPADCYSWPAVA
RGFNTIIVSHNADQPLSYLAPLLTHILLNSIFSSLTSSSGPIAVLLCPGWEKVQSVYDLL
EESKLAHTLHPVIVLLGAGTDEAKTVRIPKNCLLLVTTPFSLVRLLSSHCFMFLRLYHLV
LDGADQLFTLAPDQMATILQHFQKVTSSEEKASCPQQLVAVAKRWTSHMEGLLTTHMPYP
CIVMTVPEEAALYGNVHQIILMTLESSKISELLGTLDFNPVVGQKTLIIANSVQEVEDVF
KAVSNKSAFCLRAHEESTHQLDFVTQQWRKDIGPGTHVILVTTNECLKCFGIRDATCVVH
YSFPTSPKVFGSRLFCMAERFRNLSERFYSQDQTNSSRHDAQSVLLISERNARHVVGVLR
YLGRTDATLPPELQSFGQGVHVAREDQKTNRPLCSYLKSFGVCRDSSACPDRHRFISQLD
QSELPASGVIEVVPLFIKTASVFYGRIVRKQDSGFDVLASEMASYYADKKPGATEMLEGG
LYAVQEEELFHRVKILSVPVRGDCLFFRVLVRFVDVGKEEEVKSHQILQLPERFHSLPGQ
AVEIIVCRVKPADAEIDWHPKVTRAISQKIRGLQHRARAVHSLGNTVFVDPMVRVTQVPG
MKTVINEYNVQSEILSTGMGVRNPEHVDLLRALSQEGGASDGKEAGDISGLGDDSASLEN
RIKAEEEVLAEVFRAAEVRKLADPLPLEPCDPLSPESSVNHFLVPSPPEPELHLGPVCDI
RSDIQAADEQRNNHSSGLKSAEHTARSRDGGELCPRADLAARLHSCHNGDDERSSHQVNT
VTNGTDSDDSTKSFHPQVRWHQTSDSVIVTMKLRNPESQRCDFYPDRVVYSGRVNGRSYR
ADLELQVNVAADRCCWEMKSNEPVLKLVKQQQGSWEKLTRNKNIFVSYDMEHFEEDEDTA
PCGQWFVANTGEENWYVNSESGSDSD
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatatcaattctgaaggtcgagaacccgtcctgcctctggggtcgggtcatc
agtggtgacacagagacgacagaacagtacgacagtctgatggttcagatgaacctcttc
taccacgacgcaacacaggacctgcgcaagctgaagcccacatcaatagaagagggacag
gtgtgtgtggtgtactggtcagtgatgaagtcatggtgtcgggccgtggtggagtcaatc
atcatggactcagtgtcctgtaaggctcgctgcgtcctgatcgaccatggagaacggctc
gtcgtcccctcagaccagatccgagtcgccacagaaaagttcctccagctgcctttctgg
gtgaggaggttccacctggcaggaatcaaaccaacaaccctgcgagtgtctgtttttgag
gagaaggcagagcttactccgtccactcagtgggacagctcagctacactctacctgcac
aacctgctacaagcgtcgacttggacggaggctgtgctgctcgagtctgagtcagactcc
acctccatcgagctctacctcaccatcgggaacgtcaagatctgtgtgaacgacgacctg
gtggccaagaagtttgcatattacagcagagagtcggctgaaaacagtgggatggacgag
gtggaccgatgtcccgtcatgctgtcctcaaacatcttaacccagactgtgtccacgatc
tcaaacacgccagcagcacaaacccaaccggctcctgtgatgtcacaaggcgtggttgca
gccggagcaggtgattggctgatggcaccctctccacctcagagccaacatcatgagctg
gagacgggtgagggaggcggcaggtcagatgtcacaggagaactgactccaggcagccaa
tcaaagaagagctctgaccctgctgctgcagagagtgactcctcagacgacacagactcg
tctctggctgcagctctgaccaaaaacctcagtctgttcaagttcctaaagtttctgaat
cctggcagcagcttccagcaggcggctcatagtgtcagtcaacatgaagagccgcaggac
tgtcgagagacgaccgcagcctccagcacctgcacaggacaggaagtctccggtacgtca
gtcgagtcagaaccagcggaggcagagaggacgtggaggagtgaggaggaccgggcctgt
tcacggcttctggagtggttgaacccggagcctctgaaccccgatccagacgctgtggac
gatgtggttgttcccagtgatcccagggggagtggcatcctggtgcactctgccgtccca
attgagccctgcaccagtctggatgatgcccccgtcactgatgctctccgctgggtgctg
cggaagaagcagtacagcgctctgtctccagccgactgttacagctggccagctgtggcc
cgaggattcaacaccatcatcgtctcccacaatgccgaccagccgctcagctacctcgcc
ccgctcctcacccacatcctgctcaactccatcttcagctccctcacctccagctcaggg
ccgatagcggtgctgctgtgtccaggctgggagaaggtccagtcggtgtatgacctgctg
gaggagagcaagctcgcccacaccctccacccggtcatcgtgctgctgggtgccgggact
gacgaggccaagaccgtcaggatcccaaagaactgcctgctgttggtgaccacccccttc
agtctggtccgtctgctgtcctctcactgcttcatgttcctgcgtctgtatcatctggtg
ctggacggcgccgaccagctcttcactcttgctccagaccagatggcgaccatcttgcag
catttccagaaggtgacctccagcgaggagaaggcctcctgtcctcagcagctcgttgcc
gtggcgaagcgatggaccagtcacatggagggtttgttaaccactcacatgccgtacccc
tgcattgtcatgaccgtccccgaggaagctgctctctacggcaacgttcatcagatcatc
ctcatgactctagagagcagtaagatatcagagctgctcggcacgttggatttcaaccca
gtcgtcggccagaaaactctgatcatcgccaactctgtgcaggaagtcgaggatgtgttc
aaggccgtcagcaacaaatcagcgttctgcctcagggcccacgaggagtcgacgcaccag
ctcgactttgtcacccagcagtggaggaaagacatcggccctggcactcatgttattctg
gtgaccaccaacgagtgtctgaagtgttttgggatcagagacgcaacttgtgtcgtccac
tacagcttccccacttctcccaaagtgtttggcagccgactcttctgcatggcggaacgc
ttcagaaacctctcagagcggttttactcccaggatcaaacaaacagctcccgtcatgac
gcccagtcggtgctgctgatctctgagaggaacgcccgtcatgtcgtcggggttctgcgt
tacctgggacgcaccgacgccacgctgccccccgagctacagtccttcggccagggcgtc
cacgtggcccgggaagaccagaagaccaacaggcctctgtgcagctacctgaagagcttc
ggagtctgcagagacagcagcgcgtgtcccgaccgtcacaggttcatttcccagctggat
cagtctgagctccctgcgtctggagtcatagaggtcgtacctctcttcatcaagacggcg
tcggtcttctacggtcgtatcgtcaggaaacaggacagtggttttgacgtcttggcgtct
gagatggcgtcttactacgccgataagaaaccgggagccacggagatgctggagggagga
ttatacgccgtgcaggaggaagagctcttccacagggtgaagatcctctctgtgcccgtc
agaggcgactgcctgtttttcagggtgctcgttcggtttgtcgacgtgggaaaagaggag
gaggtgaaatcccatcaaatccttcagctgccggagcggttccactctctgcccggtcag
gccgtggagatcatcgtctgcagggtcaaaccagcggacgccgagatcgactggcaccca
aaggtcaccagagccatcagccagaagatccgaggtctgcagcaccgagccagagccgtt
cacagtctgggaaacactgtctttgttgatcccatggtccgggtgactcaggtcccgggt
atgaaaactgtcatcaacgaatacaacgtccagtctgagatcctgagtactgggatggga
gttagaaacccggagcatgtggacctgctgagggcgctgagccaggaaggcggggccagc
gacgggaaggaggcgggcgacatatctgggttgggggatgactctgcgtctctggagaac
aggatcaaagctgaggaggaagttctggctgaagtcttcagagcggccgaggtcaggaag
ctcgctgaccctcttccactcgagccatgtgacccactgagtccagagtcttcagtgaac
cacttcctggtcccatcaccaccagaacctgaactccacctgggccctgtgtgtgatatc
cggtcagatatccaggctgcagatgaacagagaaacaaccacagttctggtctgaagtca
gctgaacacacagcgaggagcagagatggaggagaactttgccccagagccgacctcgct
gctcgtctccactcctgtcataacggtgacgatgaacgcagcagccaccaggtcaacact
gtcactaacggaacagacagtgatgactccacaaaaagtttccatcctcaggtgcgctgg
caccagacgtccgactccgtgatcgtcaccatgaagctgaggaaccccgagagtcagcgc
tgtgacttctacccagacagagtcgtctacagtggcagagtgaacggccggtcctacaga
gccgacctggagcttcaggttaacgtcgctgcggaccgctgctgctgggagatgaagtcc
aatgagccagtcctcaaactggtcaaacaacagcagggatcctgggaaaaactcaccagg
aacaagaatattttcgtgagctacgacatggagcactttgaagaggatgaggacacagct
ccatgtggtcagtggtttgtggcgaacacaggagaggagaactggtacgtgaactcagag
agcggcagtgacagtgactga
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integrated database retrieval system
