Seriola dumerili (greater amberjack): 111236001
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Entry
111236001 CDS
T05606
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111236001 (rfwd3)
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111236001 (rfwd3)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111236001 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
WD40
zf-C3HC4
WD40_CDC20-Fz
zf-RING_UBOX
WDR55
EIF3I
zf-C3HC4_2
zf-rbx1
Beta-prop_WDR3_1st
Beta-prop_EML_2
zf-ANAPC11
zf-RING_5
Beta-prop_WDR75_1st
WD40_Prp19
Beta-prop_WDR3_2nd
Rtf2
zf-RING_11
zf-C3HC4_4
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_2
CFAP43_N
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
111236001
NCBI-ProteinID:
XP_022620306
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MEAMEVDSPMEIRGGGSGQPESAAAGRAGDAGAPLVISDSASSTEVDEDDDDGDNEGGQA
AARTPPRLPATWAFSQRAVGRTAATPSAAQGAPIRRRLRQGLRVHYPSQTAAPSRGFPDF
LLRAPAASVVEPESGSTTEVSESDEEDEAEDEGNEGGTSAAVLPIDPAPPASPHLNASTH
HTQPQDAGSANSGAAADNERTEAQHQSVQLVPAASASTQPSQSEEGEGDTCTICFESWTT
AGEHRLSALRCGHLFGFTCIQRWLKAQGPAAKCPQCNKKAKRSDIVLLYAPKLRALDNSE
QESLKRSLEQEQSLRRKAELESAQYKLKLQVVANKCGQVEQELQELRALMAQARRGSAPS
SSSSSSSSFSGSASLLGLSQRADGSRTAQYSFAKAVLVSQAGGCRVLSYCEPLSCLLASQ
PSPQPTLVPGCGVKKVSVVNMKASHYVPIHSKQIRGLSFNRQNDSLLLSAALDNTIKLTS
LLTNTVVQTYNAGKPVWSCCWCLDNSNYVYAGLSNGSVLVYDTRDTSTHVQELQPLRSRC
PVASLCYVPRAASSSFPCGGLIAGSLEGGCFWEQVSEDNYRPHVLPLETAGCTDIQVETE
SRHCLVTYRPGRSNPSLRCVLMSLTRAPQQDSAQLPSCSCAPVQTFNAGSSCKLLTKNAV
FRSPDGAGTLVCAGDEASNSTMVWDAGSGSLLQKLPADLPVLDISPFSVNGEHFLASLTE
KMLKLYRWE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatggaggtagactcccctatggagatccgaggaggaggcagcgggcagccc
gagtctgctgctgcaggtcgggccggggacgccggcgcaccactcgtcatctcagattcc
gccagcagcaccgaggtggacgaggacgatgatgacggcgacaatgaaggaggacaggcg
gcggctcggacccctcccaggctccccgcaacctgggcatttagtcagagggcggtgggc
aggactgcagctacgccatcagcagctcaaggggcgcccatacggaggagactcaggcag
ggcctcagggtgcactaccccagccagactgctgcgccttccagaggcttcccagacttc
ctgctccgagcgccggctgcgagcgtggtggagccggagtccggcagcaccacggaggtc
agcgagtccgacgaggaagacgaggcagaggacgaagggaacgaaggaggcacatctgcc
gctgtgctgcccatcgaccccgccccgcccgccagtcctcacctcaatgcctccacccat
cacacacaaccacaggatgccggttcagccaactctggtgcagctgcagacaacgagagg
acagaagctcaacatcagagcgtccagttggtcccggcagcctcggcctccacccagccg
tctcagagtgaggagggcgaaggcgacacctgcaccatctgcttcgagtcgtggacgaca
gccggcgaacacagactgtccgccctgcgctgcggacacctcttcggcttcacctgcatc
cagcgctggctgaaagctcagggcccggccgctaaatgtccacagtgtaacaagaaagcg
aagcgctcagacatcgtgctgctgtacgcgccaaagctgagagcgctggacaactctgag
caggagagcttaaagaggtctctggagcaggagcagtctctgaggaggaaggctgaactg
gaatcagctcagtacaaactcaagctgcaggtcgtcgccaacaaatgtggacaagtggaa
caagagctgcaggagctgagggctctgatggctcaggctcgtagaggctcggctccctcc
tcctcctcctcgtcctcctcctctttctcggggtccgcctccctcctcggtttgtctcag
agggccgacggctccaggacggctcagtacagcttcgccaaggcggtgttggtgtctcag
gccggaggctgcagggtgttatcgtactgcgagcctctcagctgtctgctggcctcacag
ccttcccctcagcccacactggtccccggttgtggggtgaagaaggtgagtgtggtgaac
atgaaggcgagtcattacgtccccatccacagcaaacagatccgaggtctgtccttcaac
agacagaacgacagtctgctgctgtccgccgctctggacaacaccatcaaactgaccagt
ctgctgaccaacacagtggttcagacctataatgcaggtaaacccgtgtggagctgctgc
tggtgtttggacaacagcaactacgtctacgccggcctgagcaacggctcggtgctcgtc
tacgacaccagagacaccagcacgcacgtccaggagctgcagccgcttcgctccaggtgt
ccggtggcgtctctgtgttacgtcccgagggcggcgtccagctcgttcccctgcggcggg
ctgatcgcagggtctctggagggcgggtgtttctgggagcaggtcagcgaggacaactac
aggccgcacgtcctgccgctggagacggccggctgcaccgacatccaggtggagacggag
agccgccactgtctggtcacgtacaggccgggtcgctccaacccgtctctgcgctgcgtc
ctgatgtctctgacccgggcgccacagcaggactccgcccagctgcccagctgctcctgc
gctccggtgcagacgttcaacgccggctcgtcctgcaaactgctcaccaagaacgccgtc
ttcaggagtccagacggagcggggacgctggtctgtgccggggacgaggcgtccaactcc
accatggtgtgggacgccggcagcggctctctgctccagaagctcccggccgacctgccg
gtgttggacatcagtccgttctcggtgaacggcgagcacttcctggcgtcgctgacggag
aagatgctgaagctctacaggtgggagtga
DBGET
integrated database retrieval system
