Seriola dumerili (greater amberjack): 111236188
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Entry
111236188 CDS
T05606
Symbol
grin3b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04020
Calcium signaling pathway
sdu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111236188 (grin3b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111236188 (grin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111236188 (grin3b)
Ion channels [BR:
sdu04040
]
Ligand-gated channels
Glutamate (ionotropic)
111236188 (grin3b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
ATG16
Uds1
Motif
Other DBs
NCBI-GeneID:
111236188
NCBI-ProteinID:
XP_022620574
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All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MSFTSSSSSWSRTLRAFLLLQLLLVPPCLLHPQPCHVLAQIGHTVRVGALLPAQRAARVQ
VQAALNRAAAALKRDQYPDPDRERDNFLPYNLSLELVSRQPAAADPESLFRCVCQGVVVQ
GVSAVLAFPQNRDELLQVDFMASFLEIPVLSVIEHGEPLLVQNRFHLQMMMGVPESGLSD
LLLTVLQRSGWREGTVVLCQGWEEARGLLRLLEGQSSASWDGGGGVTWHPRALLNLTRSA
HDDTQIHDFLSRHFRQNQPLPASVLLFGTDLQCAAAVLRSAQDLGLTLPMVHWVLGQPLN
PDALHAIGLPLGLLAYGQVDRKPLDFYVRDALQLLTSAVAAATMVRPDLALIQNMVNCYD
KPNKHEVPSSGQYLSRFLFNTSFSGLTGPVRVHQNQSQVLTSKRFHIWSLRRDALGQPTW
VTVGSWEGGQLQVEDQGVWQGPIHRHRTEGTGGRTRGRWRAGMPVAGSRVRVVTLVEHPF
VFTRDVDDEGSCPAGQFCLDAGTNNSETLERFFREVAAGNGSFLPAQYSKCCYGYCIDLL
EKLAEDLGFEYDLYIVGDGKYGAWKGGRWTGLVGDLLNGLAEMAVTSFSINSARSQVIDF
TSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFLALHITALFLTLYEWNSPFGMT
PHGRNRMRVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANL
AAVMVGEKTFEEVSGIHDAKLHHPSRGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEPT
TPEGVATLKTDPPHLDAFIMDKALLDYEVSIDTDCKLATVGKPFAIEGYGIGLPQNSPLT
SNISEFISRYKSEGYMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSGLFVLLCFGVGG
ALLTLAGEHGFYRLILPHIRRRQNLKYWLHTSQKIHRALNMTYEDVKRQRVEKEKSCNLL
KPQPSHGPPAPPAPGVSAKWNNETSKDATTAAMKDARDFRRVHFNLETLNTRRLLARIAA
SDTKGGGAKGEGSAKPNAGPSNRVCENGGPVASFASLVLSLPSSSSSTSSTYSAAPPSAT
VSPPPEVAPPQPGELQALQDQIDQMREKLRTALARRAEIQTTLAKPVATVTNNLTPATTT
AMVTMTMKTGAMPSLLPTVASAKPLPANTKCVTTMTDPPHKVLSKVRPLHSRVTNLRS
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcacctcctcctcctcctcctggtcccggactctccgagccttcctcctcctg
cagctcctgctcgtgccaccttgcctcctccacccgcagccgtgccacgtcctggcgcag
atcggacacacggtgcgcgtcggtgcgctcctgccggcgcagcgggcggctcgcgttcag
gtccaggcggcgctgaatcgcgccgctgccgcgttgaagcgggaccagtatccggacccg
gaccgggagcgggacaacttcctgccatacaacctgagcctggagctggtgtcccggcag
ccggctgccgcggacccggagtccctgttccggtgcgtgtgtcagggcgtggtggtgcag
ggagtgtccgcggtgttggccttcccgcagaaccgcgacgagctgctacaggtggacttc
atggcttcgttcctggagatcccggtcctcagcgtcatcgaacacggagagccgctcctc
gtgcagaaccggttccacctacagatgatgatgggggttccagagtctggtctgtctgat
ctgttgctgacggttctgcagcgctccggttggagggagggtactgtggttctttgtcag
ggctgggaggaagctcgaggtctcttgcggctccttgagggtcagagcagtgcatcatgg
gacggtgggggtggggtcacctggcacccacgtgcccttctgaacctgacgcggtctgcc
catgatgacacacagatccatgactttctgtcccgacacttcagacagaaccagcccctg
ccggcgtcagtgctgctgttcgggactgacctgcagtgcgcggcggcggtgctacgcagc
gcccaggatctgggcctcaccttacccatggtgcactgggtgctgggtcagccactcaac
cccgacgccctgcatgccattgggctgccacttggcctgctggcctatggacaggtggac
aggaaaccgcttgatttttacgtcagagatgctctgcaactcctcaccagtgctgtcgcc
gcggcaaccatggtgagaccggacctggccctgattcagaacatggtgaactgctatgac
aaacccaacaaacatgaggtgccatcgtcaggacagtacctgtccaggtttctgttcaac
acatctttctctggtctgacgggtccggtccgagtccaccagaaccagtctcaggtcctc
acctcaaagcggtttcacatctggagcctgcggcgggatgctcttggtcaacccacctgg
gtgacggttggcagctgggaagggggtcagctgcaggtggaagaccagggggtctggcag
ggacccatacatcggcacaggacagaggggacgggtgggaggaccaggggccgctggagg
gcgggaatgccggtggcagggagtcgagtccgggtggtgactctagtggaacatcctttt
gtgttcacgcgggacgtggacgatgaaggcagttgccctgctggtcagttctgcctggat
gctgggaccaacaactcagagactttggagaggttcttcagggaggtggcagctgggaat
ggcagcttcctgcctgcccagtacagcaagtgttgctatggatactgcattgacctgctg
gagaagctggctgaggacctcggctttgagtatgacctttacattgttggagatgggaag
tacggcgcgtggaagggggggcgctggactgggctggtgggggatcttctgaatggacta
gcggagatggctgtcacctccttcagcatcaactcagctcggagtcaggtgatcgacttc
acctcgcccttcttctccaccagcctgggcatcctggttcgaagtaaggacacggcggcc
ccgattggagccttcatgtggcccctgcattggtccatgtgggtgggcatcttcctggcg
ctgcacatcacagcgctcttcctcacattgtacgagtggaatagtccgtttggcatgacg
cctcacggtcgcaacaggatgagggtgttctcatactcatcggctctgaacctgtgctac
gccatcttgttcggacgcactgtctcttccaagacgccaaagtgctggacaggtcggttc
ctgatgaacctgtgggccattttttgcctgctggtgctgtccagctacaccgccaacctc
gccgccgtcatggtgggagaaaagaccttcgaggaggtctcagggatccacgacgccaag
ctgcaccacccatcccggggttttcgttttgggacagtgagggagagcagcgctgaggat
tacatgaagaagagttttccagagatgcacgagtacatgagacgcttcaacgaaccaacc
acacctgaaggagttgccaccctcaagacagatcctcctcatctcgatgccttcatcatg
gacaaagctctgctggactatgaagtttccattgacaccgactgtaaattggcgactgtt
gggaaaccgttcgccatcgaaggttatggtattggcctgcctcagaactctcctctgaca
tccaacatctcagagttcatcagcagatacaaatcagagggatacatggacctgctgcac
gacaagtggtacaaagtggttccctgtgggaacagagtgttcgctgtcactgagactctt
cagatggggatcagtcacttctcaggactctttgtgttgttgtgttttggagtgggcgga
gctttgctaactctggcaggtgaacatggtttctaccgcctcatcctgccacacatccgc
cgccgacagaacctcaagtactggctgcacacctcacagaaaatccatcgagctctgaac
atgacgtacgaagatgtgaagaggcagcgagtggagaaagaaaaaagctgtaacctgctg
aagcctcagccctctcatggcccccctgcccccccggctcctggagtctcggccaagtgg
aacaacgaaaccagtaaggatgcgaccaccgccgccatgaaggatgcccgagacttcaga
cgagttcacttcaacctggagaccctcaacacccgccgcctgctcgctcgcatcgcagcc
tccgacaccaagggaggcggggctaaaggtgaggggtcagccaagccgaatgcagggcca
agcaacagagtgtgtgagaatggaggaccggtggcttcatttgccagcctcgtgctctcc
ctcccgtcatcgtcctcctctacttcttccacttattctgctgctcctccttctgcaact
gtatcccctcctcctgaagtggccccgccccagcctggtgagctgcaggcgctccaagac
cagatcgaccagatgagggagaagctgaggacagctttggccaggagggctgagatccag
accactctggcaaaacccgtcgccaccgtgacaaacaacctgactccagcaaccacgaca
gcaatggtgacaatgacgatgaagacaggagccatgcccagcctcttacccaccgttgcg
tctgcaaaacccctccctgccaacacaaagtgtgtcacgaccatgacagatccgcctcac
aaagtcctgtccaaagtccgaccccttcacagcagagttaccaatctgaggagctga
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