Seriola dumerili (greater amberjack): 111236290
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Entry
111236290 CDS
T05606
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04120
Ubiquitin mediated proteolysis
sdu04137
Mitophagy - animal
sdu04144
Endocytosis
sdu04340
Hedgehog signaling pathway
sdu04350
TGF-beta signaling pathway
sdu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111236290
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111236290
04350 TGF-beta signaling pathway
111236290
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111236290
04137 Mitophagy - animal
111236290
09144 Cellular community - eukaryotes
04520 Adherens junction
111236290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111236290
04121 Ubiquitin system [BR:
sdu04121
]
111236290
03029 Mitochondrial biogenesis [BR:
sdu03029
]
111236290
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111236290
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111236290
Autophagy
Mitophagy
Other mitophagy associated proteins
111236290
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
HECT type E3
111236290
Mitochondrial biogenesis [BR:
sdu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111236290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
111236290
NCBI-ProteinID:
XP_022620689
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSSAINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAVASGPPGEQRIQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRVAMDSQNTNLS
HPTQLKDQGGPGGPQQALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHC
RIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPY
YGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLL
GKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPV
TEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPEHLLKAFDEKELELIVCGLGKID
ISDWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAA
GPRLFTIHQIDANTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtaaagctgcggttgacagtcctttgt
gcaaagaacctggcaaagaaagacttcttccggttgccagatccctttgccaaagtggtg
gtggacggttcaggacaatgccactctacagatactgtgagaaatacgctggacccaaag
tggaatcaacattatgatctatatattggaaaggcagactccatcaccatcagtgtatgg
aaccacaagaagatccacaaaaagcagggcgcaggtttcctgggctgtgtccgcctcttg
tccagtgccatcaacaggctgaaagacactggctatcagagactggacctgaataaactg
ggccccaatgacaatgacactgtgagagggcagatagtagtaagtcttcagtccagggat
cgcatcgggacaggagggccagtggtggactgcagtcgtctgttcgacaatgatttgcct
gatggctgggaagagaggaggacagcttctggaaggatacagtacctgaatcacatcaca
cgtactacacaatgggagagacctaccaggccagcgtcagagtattccagcccatcaggg
cgtccgctgagctgcgtggtggacgagaacacaccagtgatgactcccgttaatggggca
gtggccagcggcccgccaggcgaacagcggatccaggagagacgggttagatcacagcgg
catcgtaactacatgagtcggacacacctgcatacgccacctgacctgcctgagggttat
gagcaaagaacaactcagcagggccaggtctacttcctccacacgcagactggagtcagc
acttggcatgacccccgggtacccagggacttaagcaatgtgaactgtgaggagcttggc
ccactgccaccaggctgggagatcagaaacacagccactggccgtgtctactttgtcgac
cacaacaatcgaacaacacagttcacagacccgcgactgtctgctaacctgcatcttgta
ctcaacccaagtccaaatggttcccgtgtggccatggacagccaaaacactaacctcagt
catccgacgcagttgaaggaccagggtggtcctgggggcccccagcaagctctgtcacca
gcccagttacctgaagaagcagagtgcctgacggtgccaaaatacaagagagatctggtg
cagaagctgaagatcctgcggcaggaactgtctcagcaacaaccccaggctggtcactgc
cgtatcgaggtctgccgtgaggagattttcgaggagtcgtaccgacaggtgatgaagatg
cgtccaaaggatctctggaaaagactgatgatcaaattcagaggagaggagggactggac
tatggtggggtagcaagggaatggttgtacctgctgtcccatgagatgctgaacccgtac
tacggcctgttccagtactccagagatgacatctacactctacagattaatcccgactct
gctgtcaacccggagcacctgtcgtacttccactttgtgggtcgtatcatgggaatggcg
gtgttccacggccactacattgacgggggcttcactctgcccttctacaaacagctgctg
ggaaaaccgatcacgctggacgatatggagtctgtcgaccctgacctccacaacagcctc
gtctggattctggacaatgacatcactggtgtcctggaccacactttctgtgtagagcac
aacgcctacggagaaatcatccaacatgaactgaaacccaacggcaagagtattcctgtc
acagaggacaccaagaaggagtatgttaggttgtatgtgaactggcgtttcctgcatggc
atcgaggctcagtttctggccttgcagaaaggcttcaatgaggttattcctgaacacctt
ctcaaagcctttgacgagaaggaactggagctgatagtgtgtggcctgggaaagatcgac
atctcagactggaagtccaacacccgtctgaagcactgcacccctgacagcaacatagtc
aagtggttttggaaagcggtggagtcgtttgacgaggagaggagggcccgactactgcag
tttgttactggctcatccagagtcccactgcaaggcttcaaggctttgcagggtgctgca
gggcccagactcttcaccattcatcagatcgatgccaacaccaacaatttgcccaaagcc
catacctgcttcaatcggattgacattccgccctacgagagctacgacaagctgtacgat
aagctgctgacggcgatcgaggagacctgtggcttcgctgtggaatga
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integrated database retrieval system
