Seriola dumerili (greater amberjack): 111236295
Help
Entry
111236295 CDS
T05606
Symbol
ddx39a
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111236295 (ddx39a)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111236295 (ddx39a)
Spliceosome [BR:
sdu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111236295 (ddx39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111236295
NCBI-ProteinID:
XP_022620696
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGAPESGTPANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLAIKKDEEVLKKNCPHIVVGTPGRTLALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRCDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVHRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNEVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaacgacgttgataatgaacttctggactatgaagaagatgaggaaccccaa
ggagcccctgagagtgggaccccagcaaacaaaaaggaggtcaagggatcctatgtatct
atccacagctcaggcttcagagactttctcctcaaaccagagctgctccgtgccattgtc
gactgtggttttgagcatccctcagaagtccaacatgaatgtattcctcaagctatcctg
ggcatggacattctgtgtcaggccaagtctggtatgggaaagacagcagtatttgtactg
gccaccttacagcagatagaacccgtggatggtcaggtgtctgtccttgtgatgtgccac
acacgagaattggccttccagataagcaaagagtacgagcgcttttccaagtacatgccc
agtgtcaaggtgtcagtgttctttggtggcctagccatcaagaaggatgaggaagtcctg
aagaagaactgccctcacatcgttgtgggaactccaggacgtaccctggccctcatccgc
aacaagaccctcagtgtgaagaacataaaacattttgtgcttgacgagtgtgataagatg
ctggagcagctggacatgaggtgtgatgtccaggaaatcttcaggctgacaccccatgag
aagcaagttatgatgttcagtgcaacgctaagcaaggagattcgccctgtttgccgcaag
ttcatgcaggatccgatggaagtgtttgtggatgacgagaccaagctgacgctccacggc
ttacagcagtattattgcaagttgaaggacagtgagaagaaccgaaagctgttcgacctg
cttgatgtgctcgagttcaaccaggtggtgatctttgtgaagtcggtacatcgctgtgtg
gctctgtctcagctgctggtggagcagaacttccctgctattgcaatccacaggggcatg
gcacaggaggagaggttatcccggtatcagcagtttaaagacttccagcggcggatcttg
gttgcaaccaacctgtttggccgaggcatggacattgagcgagtcaacatcgtcttcaac
tacgacatgccagaggattctgacacttaccttcacagagtggcccgtgccggcaggttt
ggaaccaaaggtctggccatcacctttgtgtcagacgagacagatgccaagaccctcaat
gaggtccaagaccgctttgaggtcaacgtagcagagctaccagaggaaattgatatttcc
tcctacattgaacagtccagatga
DBGET
integrated database retrieval system
