Seriola dumerili (greater amberjack): 111236571
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Entry
111236571 CDS
T05606
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111236571
04091 Lectins [BR:
sdu04091
]
111236571
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111236571
Lectins [BR:
sdu04091
]
C-Type lectins
Others
111236571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Lectin_C
Ion_trans
SUEL_Lectin
GPS
REJ
PKD
Motif
Other DBs
NCBI-GeneID:
111236571
NCBI-ProteinID:
XP_022621079
LinkDB
All DBs
Position
Unknown
AA seq
2291 aa
AA seq
DB search
MGSTAFPSLTLMVLLLSWTCYAEEDAETLSCPEYQEGFDGSCYEFVGQQRSFLNAQGWCE
RGGGHLAFILNDETQQFLQKHLEPERDWWLGLAPAAPNLTLESAATEGSLAWLDGSDVSY
SNWVNMPDAQEVCGYILRHSGFQWEATVNCSQELNFICQFDSGRSIACDVQNATLQCGSG
QVIEIDDSFYGRKTIHYCRSKLTTSPTSSQEECSWIDVVDSVTAHCHGLQACQAPVDLSS
FGEPCPVLGSYLSVEYHCKHGLHLLMSKLAAVFDNVTITVKWLLHPFQGNLTCTLNAGDG
HIIDPYSPEEMESTIIHKFSRPGVFMVGVECTTNDWHVTAQKAITVQQPVGEFSVIKCYS
GNVSTDGTKCNAIYGRPVLIQVMVEAGTNVSYTIQHEDHLLANSSVDRGITPHNITLNSS
VAEELGHGCHNLTLAASNRVTAHTVSIDLELCLLEPVEGLQASVMSEEGECPDSTDIIID
VSCDNCTSVNLNDHIKLRLSCVTTCPDVVWYIEDPRPLTGDLEKCYSNAGRRPAIEMQDG
STEYSVHSQHLNVSRHTLQNISVIAYGKKKPGFAKYTLPLPGPEPTDAPTDSSPPSCSIS
PTSGTVLDAFDITCKPSSFCSEGCFYCFKTDTGKHLRCSNANEVKSVLLPLGDKNNNYSL
SVVVTVKNAYKKATTTVTAQVWKSNSSASVEDLQSAVEDTVAHLEQQGLLSGEALGQIFT
SVSDMLNTEAGQDQRDARTKLREQMLTKMTTVLADSPTNTTQEVKVTATAVAGLTQLSDE
LSPAAQEEAGSLLVDLSSSLKTISVNQDGVDDGEVMQAATPIVEAASNILNISSDVRRKK
NLSEYLLTGINNVQSALLNNKELNGDPAIIESGQISVYVNRVSPETMQMQDINVQKNSSS
RFSFPRLPEDVVSPKEPVDVRMMSFEKNPYSWKEGNITGTVGSVTLTRVNGTVIQVENLP
DEIEIFLPRLDVGQENSTVLDLANFSTLIIDVPSPDVTLVLKMELSQDISFMLFLGCQDY
PNDENYVAKTQMPLENSREEEKYTWVLSPKDRTGDVGVHYLVMKPIVEPGVKSINATITV
TSIAAQCKYWNDSKSSWSEDGCRVGPLTTPLVTQCLCNHLTFFGSSFFVMPNLVDVSRTA
ELFATFTNNPVVVCFVGAIFSAYLLVAIWARRKDIQDSAKVKITVLEDNDPLAEYRYVLN
ISTGHRHGASTSSQVTITLLGTEGESDPHHLTDPEKPVFERGGVDMFLLTTHFSLGDLQS
IRLWHDNSGEHPAWYINKVMVQDLESGQKWHFLCNSWLAVDVGECSLDKVFPVATEMDLK
RFSNLFFMKTAKDFRDGHIWFSVISRPPCSTFTRVQRVSCCFSLLLCTMLTSIMFWGIPT
DPSEQTMDLGHIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNTRPREKTSKTDVSKQGKT
GRVSPSQTSFPQKELKDITPDTVIKDIKRIAQSLAKAMKSPLPHQELHPGQRADINTLLS
LVEDIIRQQNRAAGDFYTDASKRDRSMILSLGAVSLQENSLWGSPEKTSDEVQKKSNNSR
YLYRQLRHVEKEMGLLGPSRFPNPDSYNRAMQQVQGMKGLLERHHPSSSLDGDQLDRSPS
PEESVNNGDSAKKCCQGGLPWWFVFVGWILVIATSGVSGYFTMMYGLTYGKERSISWLIS
MVVSFFESLFITQPLKVLGFAAFFALVLKKVDQEEYGEPQIDESLRDADDPDALRAARRD
STCSFYQPPPPTDIERIRNNMIKEQKVFALMGEILAYMGFMWMLLLVAYGQRDPNAYFLT
QHIRQSFSKGISDSMSIQDVFSWANTTLLSNLFGERPGFITDGNSKLVGNARLRQVRVKK
NSCHVARSMQQSVPDCHAPYSWELEDMGSYSPGWSHSVGGNTSLNPHSPWTYQSQGKLRA
YPIWGSVKLYRGGGFVVDLGPDLSNSSRSLQYLHDNTWFDVYTQAIFVEFTVYNANVNLF
CIVTLMLETTAVGALQFRSELQSVRLYQSTGGLHIFVMASEAIYFLFIIYYMFVQGKLMK
QQKWDYIKSKWNLLELAIIILSWSALSVFIKRTLLGNRDMDYYQNHRDQYASFHETAKAD
AVLGYLIAFLVLLATVKLWHLLRLNPKLHMITSTLQRAWTDISGFLVVMTIMFLAYSIAS
NLMYGWKLYSYRTLLDAAQTIISLQLGIFNYEEVLNYNPVLGAFLIGSCIVFMTFVVLNL
FISVILVAFSQEQIHHKPSEEDEIVDLMLMKLCGLFGLKCKKQGGDSLTERPVVSSASTT
LIISSGNIHES
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcactgctttcccctcattgactttgatggttctcctcctcagctggacttgt
tacgctgaggaggatgcagagactctatcctgcccagaataccaggagggttttgacggc
tcctgctacgagtttgtgggtcagcagcggtccttccttaatgcccagggatggtgtgag
cgaggcgggggacacctagctttcatcctgaatgacgaaactcagcagttccttcagaag
cacctggagccagagagggactggtggctcgggctggcacctgctgccccaaacctcacg
ctcgagtctgctgccactgagggttcccttgcttggctggatggctcagatgtcagctac
agcaactgggtgaacatgccagatgcacaagaagtctgtggatatattctgaggcattca
ggtttccagtgggaagccacagtgaactgtagccaggaactcaacttcatctgccagttt
gattccgggagatctatcgcatgtgatgtacaaaatgccacattgcaatgtggctctggt
caagttatagagattgatgacagcttctacggtcgaaagacaattcactactgccgatcc
aaacttacaacctcacccacatcctcccaggaggagtgcagctggatagatgtggtagat
tctgtaacagcccattgccatggactgcaggcttgccaggctccagtggatctgagctct
tttggtgaaccatgtcctgtgctgggaagttacctgtctgtagagtaccactgcaaacac
ggactccacttactgatgagtaaactggcggccgtttttgataatgtcaccatcactgtg
aagtggctccttcatccatttcagggaaatctgacatgcacactgaatgctggagatggg
cacattattgatccatacagcccagaggagatggagagcactattatacacaaattcagc
cgtcctggtgttttcatggttggggtggagtgcaccaccaacgactggcatgttacggct
cagaaagccataaccgttcagcagcctgtcggagagtttagtgtgatcaagtgctatagc
gggaatgtgtcaacagatggcactaaatgcaatgcgatttatggcagacctgttctaatt
caggttatggtggaggcaggcacaaatgtttcctacacaattcaacatgaagaccatttg
ttggcaaactcttcagtggacagagggattacaccccacaacattacactgaattcaagt
gtggcagaggagctcgggcacggctgccacaacctgactctagcagcgtcaaacagggtt
acagcccacacagtgtccattgatctggagctgtgtctgctggagcctgttgaaggcctg
caggcctcagttatgtcagaggaaggcgagtgtccagactccacggatatcatcattgat
gtttcttgtgataattgcacttccgtgaatttgaacgaccacataaagctaagactgagc
tgtgtgacaacttgtccagacgtagtctggtatattgaggaccccagacctttgacgggt
gaccttgaaaagtgttactccaacgcaggaaggaggccagctattgagatgcaggacggc
agcactgaatattctgtacacagccagcatctgaacgtttcgaggcacacattgcaaaac
atcagtgtgattgcttacggcaagaagaagccaggttttgccaagtacactcttccatta
ccaggccctgagccaactgatgcacccacagactccagccccccctcatgtagcatctct
cccacatcgggaactgttcttgatgctttcgacattacctgcaaaccaagctctttctgc
tctgaaggctgtttttattgcttcaaaactgacacaggcaaacatctgcgctgcagcaat
gcaaatgaggtgaaatctgtcctcctgcctcttggagataagaacaacaattacagtttg
tctgttgtggtgaccgtgaaaaatgcatataagaaagccaccacaactgtcactgctcag
gtgtggaaaagtaactccagtgcgtcagtggaggatctccagtctgcagtagaggatact
gtggctcacttagagcagcaaggtctgctgtctggtgaggcactcggacaaatattcact
tcagtttctgacatgctgaatacagaggctggccaagatcagagggatgcgaggacgaag
ctcagagagcaaatgctgaccaaaatgaccactgtgctggcggactcccccactaacaca
actcaggaagtgaaagtgacggccacagctgtggctggactcacccagctctcagatgaa
ctcagtcccgctgctcaagaagaagcaggttccttactggttgacctcagctcctccctc
aaaactatcagtgttaatcaggacggagtggatgatggagaagtcatgcaagcagcgaca
ccaatagttgaagcagccagtaatattttgaatatttcatcagatgtaagaagaaaaaaa
aatctgtctgaatatcttttgactgggataaacaatgttcaaagtgctttgctgaataat
aaagagttgaatggagaccctgccatcattgaatctggtcagatcagtgtctatgttaac
agagtgtctccagaaaccatgcagatgcaagatataaacgtccagaagaacagctcgtcc
agattttccttccctagactgcctgaagatgtggtttctccaaaggagccagtggatgtg
agaatgatgagctttgagaaaaatccatattcttggaaggaaggaaacatcacaggaact
gtaggatctgtgactctcaccagagtgaacggtactgtcattcaggttgagaacttacct
gacgagatagagattttcctaccaaggcttgacgttgggcaggagaacagcacagtcctt
gacctcgccaatttcagcacattaataattgacgtcccctcgccggatgtaacactggtg
ctgaaaatggagctgtctcaagacatttccttcatgctattcctgggatgtcaagattat
ccaaatgatgagaattacgtagccaagactcagatgcctctagagaattccagagaagag
gaaaaatatacctgggtgctgagtcccaaagacagaacaggagacgttggagtgcactac
cttgttatgaagcccattgtagagccaggcgtcaaatctatcaacgccaccatcactgtc
acttccatcgctgcccagtgcaaatactggaatgactcaaaatcttcttggagtgaagat
ggctgcagggtcggtccactcaccacgcctttggtcactcagtgcctctgtaaccacttg
actttctttggcagctctttctttgtcatgccaaacttggtggatgtgtcacgcaccgca
gaactgtttgctacattcactaacaatcctgtggtggtgtgttttgtgggggccatcttt
tctgcttatctccttgtagctatatgggcacgcaggaaagacatccaggactcagccaag
gtcaagataacagtgcttgaggacaatgaccccttggctgagtatcgttatgtgctgaat
atcagcaccgggcatcggcacggtgcatccacctcctctcaggtgacaataactctgctg
ggtaccgagggagaaagtgacccccaccacctgacagaccctgagaaacctgtgtttgag
aggggcggggtggacatgttcctgctcaccacacacttttctcttggagatctacagagc
atcagactgtggcacgacaactcgggagaacaccctgcatggtatatcaacaaagtgatg
gtgcaggatctggagagtggtcagaaatggcacttcctgtgtaactcctggctggctgta
gatgtgggagagtgctctcttgacaaggtcttcccagtagccacagagatggatttaaag
aggtttagtaacttgttcttcatgaagacagccaaggatttccgcgacggtcatatctgg
ttctccgtcattagtcgacctccctgcagcactttcacacgtgtgcagcgagtgtcgtgc
tgtttttctcttctgctgtgcactatgctgaccagcattatgttttggggcataccgaca
gacccctctgagcagaccatggacctgggccacatcgagttcacctggcaacaggttatg
atcggaattcagagttcaatcatcatgtttcccatcaatctccttattgtgagtatcttc
agaaacactcgtcctcgggagaaaaccagcaaaacagatgtgtccaaacaggggaagaca
ggtcgagtttctccctcacagacttccttcccgcagaaggagctgaaggacatcacacca
gacactgtgatcaaggacataaagagaattgcacagtcactcgcaaaggccatgaaaagt
ccactgccccatcaggagctccatcctggtcagcgggcagacattaacactctgctgtct
ctggtggaggacatcatcagacagcagaaccgagcagctggagacttctacaccgacgcc
tccaaaagggatcgctccatgatcctcagtttaggtgcagtcagtctgcaagaaaacagt
ttgtgggggagccctgagaagacttcagatgaagttcagaagaagagcaacaacagccga
tacctgtacaggcagctgcgtcatgttgagaaggagatgggtctgttgggaccttctcgt
ttcccgaacccagacagctacaaccgagccatgcagcaagttcaaggaatgaagggtctc
ctggagcgccaccacccctcctccagcctggatggagaccagctcgaccgcagccccagt
ccagaagagagcgtcaacaatggggactccgccaagaagtgctgccaaggagggctgcca
tggtggttcgtctttgttgggtggatactggtgattgcaaccagtggtgtttcaggatac
ttcaccatgatgtatgggctgacgtacgggaaagagcgctctataagctggctcatctcc
atggtggtctccttctttgagagcctctttattacccaacctctgaaggttctcggtttt
gctgctttctttgctcttgttctgaaaaaagttgaccaggaggagtacggagagcctcag
atagatgagagtctcagagatgcagatgatcctgatgcactgcgggcagccagaagagac
agcacgtgcagtttctatcagccaccacctcccactgacattgagaggattaggaacaac
atgattaaagagcagaaagtcttcgcactcatgggggagattcttgcctacatgggattt
atgtggatgttgctcctggtggcgtatggtcagagggaccccaacgcctactttctgaca
caacacattcgacagagcttcagcaaagggatctctgacagtatgagtattcaggatgtg
ttcagttgggcaaacacaactcttctgagcaacctgtttggagagcgcccaggatttatc
acagacggaaactcaaagctggtgggtaacgctcgtctccgccaggtgagggtgaagaaa
aactcctgccatgttgctcgctccatgcagcagtctgtgccggactgtcacgctccgtac
tcgtgggagttggaagacatgggctcctacagtccaggctggagccactctgtgggaggc
aacacctcactgaacccccacagcccgtggacataccagtcccagggtaaactgagggcc
taccccatctggggcagtgtgaaactctacagaggaggggggtttgtggtggatctgggg
cccgatttatcaaattccagcagatcccttcagtaccttcatgacaacacctggtttgat
gtgtacacccaagcaatctttgttgagttcactgtgtacaatgccaacgtcaatctcttt
tgcattgtcacactcatgctggagaccacagccgtaggggctttgcagttccgcagtgag
cttcagagtgtgcgcctttaccagtcgaccggcggccttcacatctttgtcatggcctct
gaagccatctacttcctctttatcatttactacatgtttgttcagggaaaactgatgaag
cagcagaaatgggattatatcaagagtaagtggaacctgctggagctggcgatcatcatt
ctcagctggagtgcgctgtctgtcttcatcaagaggactttactggggaatcgggacatg
gactattaccaaaaccacagagaccaatacgccagctttcatgagacggccaaggctgac
gcggtgctggggtatctgattgccttcttagtactgttggctacagtcaaactgtggcac
ctgctgagactgaaccccaagctgcacatgatcacatccacattgcagcgggcctggact
gatatttcaggcttcctggtggtcatgaccatcatgttcctggcctactccattgcttct
aacttgatgtatgggtggaagttatactcctaccggaccctgctggatgctgcgcagacc
atcatcagcctgcagcttggcatttttaactacgaagaggttctgaattataatccggtg
cttggtgctttcctcatcgggtcctgcattgtgttcatgacctttgtggtgctgaacctc
ttcatttctgtcatcctggtggcattcagtcaagagcagatacatcacaagccatcagaa
gaggatgagattgtggacctgatgctgatgaaactctgcggtttgttcggactcaaatgt
aagaaacaagggggcgacagcctgactgagaggccggtggtttcatctgcttcaacaaca
ttgatcatttcttctgggaatattcatgagagctga
DBGET
integrated database retrieval system
