KEGG   Seriola dumerili (greater amberjack): 111236601
Entry
111236601         CDS       T05606                                 
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sdu03021]
    111236601 (ctr9)
Transcription machinery [BR:sdu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     111236601 (ctr9)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_19 TPR_14 TPR_16 TPR_8 TPR_CcmH_CycH TPR_12 TPR_17 TPR_10 TPR_7 TPR_11 TPR_6 ARM_TT21_5th TPR_Slam ARM_TT21_4th ANAPC3 TPR_EMC2
Other DBs
NCBI-GeneID: 111236601
NCBI-ProteinID: XP_022621126
UniProt: A0A3B4VNC8
LinkDB
Position
Unknown
AA seq 1163 aa
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQLLKEQEEKRNREAEEQKKLLEQRALYVEKTKNLLTFAEGSKEMAK
EKKKGGGGGGRRKKGGDMDEFVNDDSDEDLPIKKKKKRKGGSGSEQEEVEDGEKKKKKRR
RPAKAGGEDESDDEEGGSRSKKQRKPKERKRIEKPQPERLPPSLKGKIKSKAIISSSESS
SDEDGLKIAEDRHQRDSGSGSDDEGGHRKRIASDSESDGGRNRSGSEAGSPRRSAGSEDD
DSGSDRPVKKRRIQRQSDSEQSDNESKRSRSGSDDESRPGSPVAASDRGSDRGSEAGSDN
EGSPRRSDNGTEPEASNNDEDSD
NT seq 3492 nt   +upstreamnt  +downstreamnt
atgtctcggggctccattgagatccctctgcgggacaccgatgaggttatcgagcttgac
ttcgatcagctgccagaaggagacgaggtcatcagtatcctgaagcaggagcacacacag
ctccacatttggattgctttggcgctggagtactacaagcagggcaaaacagaggatttt
gtcaagcttttagaggcggctcgcatcgatggaaacctggactacagagaccatgagaaa
gaccagatgacctgtctggacacattggcagcttactatgtccagcaagcacgtaaagag
aaaaacaaagatgccaagaaagagctcatcacgcaggccacgcttctctatactatggca
gacaagatcatcatgtatgatcagaaccatttgttgggaagagcctgtttctgcctgctg
gaaggagacaagatggaccaggccgatgctcagttccactttgtcctcaatcagtccacc
aataacatccctgctttgcttggtaaagcttgcatctccttcaataaaaaggattacaga
ggagcactggcgtactacaaaaaggccctgcgtacaaaccccggctgcccagcggaggtc
aggctggggatgggtcactgttttgtcaagctcaacaaactggagaaggctcgtttggct
ttcggtcgagccctggagcttaattcgaagtgcgtgggagctcttgttggtttggccgtt
ttagagctcaacaacaaggaggcagactcgatcaagaacggagtgcagctcctatcgcgg
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctcgccaaccatttcttc
ttcaaaaaggactacagcaaagtgcagcatctggccctccatgctttccataacacagaa
gtcgaagccatgcaggctgagagctgctaccagttagctcgctcttttcacgtgcaggag
gactatgaccaagcgtttcagtattactaccaagccactcagtttgcctcgtccaccttt
gtgttgcccttctttggcttggggcagatgtacgtgtatcggagagacaaggagaacgca
gcacagtgctttgagaaggttttaaaggcctaccccaacaactatgaaactatgaaaatc
cttgggtctctctatgcaacatctgacgatcaggaaaagagagacatcgctaaaggtcac
ctgaagaaggtaacggagcagtacccagatgatgtggaggcatggatcgagctggctcag
atcctggagcagaccgacatacagggagcgctgtctgcttacggtacagccacccgcatc
ctgcaggagaaggtgcaggccgacgttcccccggagatcctcaacaacctgggggctctt
cacttcagactgggcaacctgggagaggccaagaaatattttctggcatctctggaccgg
gccaaagctgagggagagcatgacgagcattactacaacgccatttctgtcaccacctcc
tacaatctggctcgtttgtatgaggccatgtgtgaattccacgaagctgagaaactctac
aaaaacatcctcagagagcatccaaactatgtggactgttatctgcgtcttggagcgatg
gctcgtgacaaaggaaacttctatgaagcctctgactggttcaaagaagctctgcagatt
aatcaggaccacccggacgcctggtctctgataggaaaccttcacttggccaaacaggaa
tggggaccgggccaaaagaagtttgagcgtatcctgaagcagccgtccacacagaacgac
acctactccatgctggctctgggtaacgtgtggctgcagacgctgcaccagcccaccaga
gaccgggaaaaggaaaaaagacaccaggatcgagccctggcgatatacaagcaagtcctg
cgaaatgatgccaagaacctctatgccgccaatggcatcggtgccgtccttgcccacaag
ggctacttcagagaggctcgggatgtgtttgcgcaggtgagggaggccacagcggacatc
agtgacgtctggctaaatctggctcacatctatgtcgagcagaagcagtacatcagcgct
gtgcagatgtatgagaactgcctgaagaaattttacaaatatcagaacactgaggtgctg
ctgtacctcgcgagggcgctcttcaaatgtgggaaactccaagagtgcaagcagatgcta
ctgaaggcccgtcacgtggcgcccagcgacacggtgctgatgttcaatgtggcgctggtg
cttcagagactggccactcttgtgctgaaagatgagaagagcaacttgaaggctgtgctc
agcgctgtcaaagagcttgagctggctcacaggtatttcagctacctcagcaaggcagga
gacaagatgaggtttgacctcgctctggctgcttctgaggccaggcagtgctctgacctg
ctgagtcaggctcaataccacgtggcaagagccagaaagcaggatgaggaggagaaggag
cttcgggccaaacaggagcaggagagggacctgctgcgccagcagttgctcaaagagcag
gaggaaaaacggaacagagaggcagaggaacagaagaagctcctggagcagagagctttg
tacgtggagaagaccaagaacctgctcaccttcgcagaagggtcgaaagaaatggccaaa
gaaaagaagaagggaggcggtggtggaggacgtcgtaagaaaggaggtgacatggatgag
tttgtcaacgatgactctgacgaggacctgccaatcaagaagaagaagaagagaaagggt
ggaagcggcagcgagcaggaggaggtcgaggacggagagaagaagaagaagaagaggagg
cgacctgctaaagcaggaggagaggatgagagtgatgatgaggaaggaggatcacgatcc
aagaagcagcgtaaacccaaagaacgcaagaggatcgaaaagccacagcctgagcgtttg
ccaccatctctcaaagggaagatcaagtctaaggctatcatctcctcttctgaatcatct
tcagatgaggatggactgaaaatagctgaagacagacaccaaagagacagtggttcagga
tctgatgacgagggcggccacaggaagcgcattgcatctgacagtgagtcggacggagga
aggaaccgctccggtagcgaggcgggaagccctcggcgctccgcaggctccgaggatgac
gactccggcagcgaccgcccagtgaagaagaggaggatccagcggcagtctgactcggag
cagtcagacaacgaaagcaagaggagtcggtcaggatcagatgacgagtctcggcctggt
tcgcccgtcgcggcgtcagaccggggatcagacagagggtctgaagcgggatcagacaac
gagggctccccacggcgatctgacaacggtactgaacctgaagcttccaacaatgatgaa
gacagcgattaa

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