Seriola dumerili (greater amberjack): 111236601
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Entry
111236601 CDS
T05606
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111236601 (ctr9)
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
111236601 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
111236601
NCBI-ProteinID:
XP_022621126
UniProt:
A0A3B4VNC8
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQLLKEQEEKRNREAEEQKKLLEQRALYVEKTKNLLTFAEGSKEMAK
EKKKGGGGGGRRKKGGDMDEFVNDDSDEDLPIKKKKKRKGGSGSEQEEVEDGEKKKKKRR
RPAKAGGEDESDDEEGGSRSKKQRKPKERKRIEKPQPERLPPSLKGKIKSKAIISSSESS
SDEDGLKIAEDRHQRDSGSGSDDEGGHRKRIASDSESDGGRNRSGSEAGSPRRSAGSEDD
DSGSDRPVKKRRIQRQSDSEQSDNESKRSRSGSDDESRPGSPVAASDRGSDRGSEAGSDN
EGSPRRSDNGTEPEASNNDEDSD
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctccattgagatccctctgcgggacaccgatgaggttatcgagcttgac
ttcgatcagctgccagaaggagacgaggtcatcagtatcctgaagcaggagcacacacag
ctccacatttggattgctttggcgctggagtactacaagcagggcaaaacagaggatttt
gtcaagcttttagaggcggctcgcatcgatggaaacctggactacagagaccatgagaaa
gaccagatgacctgtctggacacattggcagcttactatgtccagcaagcacgtaaagag
aaaaacaaagatgccaagaaagagctcatcacgcaggccacgcttctctatactatggca
gacaagatcatcatgtatgatcagaaccatttgttgggaagagcctgtttctgcctgctg
gaaggagacaagatggaccaggccgatgctcagttccactttgtcctcaatcagtccacc
aataacatccctgctttgcttggtaaagcttgcatctccttcaataaaaaggattacaga
ggagcactggcgtactacaaaaaggccctgcgtacaaaccccggctgcccagcggaggtc
aggctggggatgggtcactgttttgtcaagctcaacaaactggagaaggctcgtttggct
ttcggtcgagccctggagcttaattcgaagtgcgtgggagctcttgttggtttggccgtt
ttagagctcaacaacaaggaggcagactcgatcaagaacggagtgcagctcctatcgcgg
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctcgccaaccatttcttc
ttcaaaaaggactacagcaaagtgcagcatctggccctccatgctttccataacacagaa
gtcgaagccatgcaggctgagagctgctaccagttagctcgctcttttcacgtgcaggag
gactatgaccaagcgtttcagtattactaccaagccactcagtttgcctcgtccaccttt
gtgttgcccttctttggcttggggcagatgtacgtgtatcggagagacaaggagaacgca
gcacagtgctttgagaaggttttaaaggcctaccccaacaactatgaaactatgaaaatc
cttgggtctctctatgcaacatctgacgatcaggaaaagagagacatcgctaaaggtcac
ctgaagaaggtaacggagcagtacccagatgatgtggaggcatggatcgagctggctcag
atcctggagcagaccgacatacagggagcgctgtctgcttacggtacagccacccgcatc
ctgcaggagaaggtgcaggccgacgttcccccggagatcctcaacaacctgggggctctt
cacttcagactgggcaacctgggagaggccaagaaatattttctggcatctctggaccgg
gccaaagctgagggagagcatgacgagcattactacaacgccatttctgtcaccacctcc
tacaatctggctcgtttgtatgaggccatgtgtgaattccacgaagctgagaaactctac
aaaaacatcctcagagagcatccaaactatgtggactgttatctgcgtcttggagcgatg
gctcgtgacaaaggaaacttctatgaagcctctgactggttcaaagaagctctgcagatt
aatcaggaccacccggacgcctggtctctgataggaaaccttcacttggccaaacaggaa
tggggaccgggccaaaagaagtttgagcgtatcctgaagcagccgtccacacagaacgac
acctactccatgctggctctgggtaacgtgtggctgcagacgctgcaccagcccaccaga
gaccgggaaaaggaaaaaagacaccaggatcgagccctggcgatatacaagcaagtcctg
cgaaatgatgccaagaacctctatgccgccaatggcatcggtgccgtccttgcccacaag
ggctacttcagagaggctcgggatgtgtttgcgcaggtgagggaggccacagcggacatc
agtgacgtctggctaaatctggctcacatctatgtcgagcagaagcagtacatcagcgct
gtgcagatgtatgagaactgcctgaagaaattttacaaatatcagaacactgaggtgctg
ctgtacctcgcgagggcgctcttcaaatgtgggaaactccaagagtgcaagcagatgcta
ctgaaggcccgtcacgtggcgcccagcgacacggtgctgatgttcaatgtggcgctggtg
cttcagagactggccactcttgtgctgaaagatgagaagagcaacttgaaggctgtgctc
agcgctgtcaaagagcttgagctggctcacaggtatttcagctacctcagcaaggcagga
gacaagatgaggtttgacctcgctctggctgcttctgaggccaggcagtgctctgacctg
ctgagtcaggctcaataccacgtggcaagagccagaaagcaggatgaggaggagaaggag
cttcgggccaaacaggagcaggagagggacctgctgcgccagcagttgctcaaagagcag
gaggaaaaacggaacagagaggcagaggaacagaagaagctcctggagcagagagctttg
tacgtggagaagaccaagaacctgctcaccttcgcagaagggtcgaaagaaatggccaaa
gaaaagaagaagggaggcggtggtggaggacgtcgtaagaaaggaggtgacatggatgag
tttgtcaacgatgactctgacgaggacctgccaatcaagaagaagaagaagagaaagggt
ggaagcggcagcgagcaggaggaggtcgaggacggagagaagaagaagaagaagaggagg
cgacctgctaaagcaggaggagaggatgagagtgatgatgaggaaggaggatcacgatcc
aagaagcagcgtaaacccaaagaacgcaagaggatcgaaaagccacagcctgagcgtttg
ccaccatctctcaaagggaagatcaagtctaaggctatcatctcctcttctgaatcatct
tcagatgaggatggactgaaaatagctgaagacagacaccaaagagacagtggttcagga
tctgatgacgagggcggccacaggaagcgcattgcatctgacagtgagtcggacggagga
aggaaccgctccggtagcgaggcgggaagccctcggcgctccgcaggctccgaggatgac
gactccggcagcgaccgcccagtgaagaagaggaggatccagcggcagtctgactcggag
cagtcagacaacgaaagcaagaggagtcggtcaggatcagatgacgagtctcggcctggt
tcgcccgtcgcggcgtcagaccggggatcagacagagggtctgaagcgggatcagacaac
gagggctccccacggcgatctgacaacggtactgaacctgaagcttccaacaatgatgaa
gacagcgattaa
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integrated database retrieval system