Seriola dumerili (greater amberjack): 111236636
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Entry
111236636 CDS
T05606
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04310
Wnt signaling pathway
sdu04520
Adherens junction
sdu04916
Melanogenesis
sdu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111236636 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111236636 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
111236636 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111236636 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111236636 (lef1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
111236636 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111236636
NCBI-ProteinID:
XP_022621172
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MPQLSGGGGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVNESE
SSPNSNSHDAARQSQIPQDSYHEKHRDHPEDGKHQDMYSKGHPYPGYPGYIMMSNMNNDS
YMNNGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGSHSGHHPQDASNKQGM
PRHHPGPDMTNFYSLSPGGVGQITPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKHEP
PHETDIMHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQIL
GRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQESATGGKRN
NFSTCKAKAAATGPLLEMEAC
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttatcaggcggcggcggcggtggagacccggagctgtgcgctacagacgaa
atgatcccgttcaaagacgaaggagacccgcacaaggagcagatcttcgccgagctcagc
cactcggaggaagagggagacctggcggacatcaagtcatctctggtcaacgagtcggag
agcagccccaacagcaacagtcacgatgcagctagacagtcccaaataccgcaagattca
tatcatgaaaaacaccgagaccatccggaagatggaaagcatcaagacatgtacagcaaa
ggccatccgtacccgggctacccaggttacatcatgatgagtaacatgaacaatgactcc
tacatgaacaatggctccctctcaccacccatgcccagaacgtccaacaaagtccctgtg
gtgcagccgtctcatgccgtccacccactcaccccgctgatcacgtacagtgacgagcac
ttcgctccaggatctcattctggccatcacccccaggatgccagcaacaaacaaggaatg
ccaaggcatcaccctggaccagacatgaccaacttctactccctatctcctggaggagtg
gggcagataacaccaccgctgggatggttctcacaccacatggtgcccggccccccaggt
ccccacgccacagggatcccccacccggccatcgtcaacccacaggtcaaacacgagcca
ccgcatgaaacagacatcatgcacatgaaaccccagcacgaacagagaaaggagcaggag
cccaaaagaccgcacatcaagaagccgctaaacgccttcatgctctacatgaaagagatg
cgtgcgaatgtggtcgccgagtgcacgctgaaggagagtgctgccatcaatcagattctg
ggacgaaggtggcatgctttatctcgggaagagcaagctaagtattatgagttagcccgc
aaggaacggcagctccacatgcagctctacccaggctggtccgctcgagacaattatgga
aagaagaagaagcggaagagggagaagatgcaggaatcggccacaggaggaaaacggaac
aatttctccacatgcaaagcgaaggcagcagctacgggccctctgctagagatggaggcc
tgttag
DBGET
integrated database retrieval system
