Seriola dumerili (greater amberjack): 111236772
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Entry
111236772 CDS
T05606
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111236772 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111236772 (hbs1l)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111236772 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
111236772
NCBI-ProteinID:
XP_022621344
UniProt:
A0A3B4UHD5
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVDDDYCCISPATANQFIYSRQERQPPKEEPLEEEE
YEDEDVPMSPTISHNLDPLDQAKLYSCLDHMRTVLGDAVPDSVLSQAAIKYGFDPQRALD
AVLSEDTKTAPVKRSTNEETASVAGVSQEKAPLPQRTKREPVADKAKSRDASHNKLESEV
VPKVARMTVSGKKQTMGFDVPSTAENGSVTASVRRGGSPENANVTPATEATSKRPETPSK
GSNGDEPSPVPTPGRKSRQALNIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLL
GNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMD
APGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVA
VNKMDQVNWQQERFQEIISKLGHFLKQAGFKESDVFYIPTSGLSGENLATRSSVSQLTSW
YSGPSLLEQIDALKSPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRILAMP
PNETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPIRVCTRFRAR
ILLFNIEVPITQGFPILLHYQTVSEPATIRKLVSVLHKSSGEVLKKKPKCLSKGMNAIVE
IQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaacgtccgaggttataactacgatgaagactttgaagatgatgac
atgtatgggcagtctgtggatgatgactactgctgtatatcaccagcaacagcgaatcag
ttcatctactcgcgtcaagagaggcagccaccaaaagaagagcctttagaagaggaagaa
tatgaagatgaagatgttcctatgtcccctaccatcagtcacaaccttgaccctcttgat
caagccaagctgtattcttgtctggatcatatgcggacagtgctgggagatgcagtgcca
gattcagtcctcagccaggcagccataaaatatggatttgacccacagagggcactggat
gcagtcctgtctgaagacactaaaacagcccctgttaaaagaagtaccaatgaggagaca
gcttcggtagcaggagttagccaagagaaagcgccacttccacaaagaaccaaacgagag
cccgtggctgacaaagctaaaagccgagatgcgtcacacaataaactggagtctgaggtg
gtacccaaagtggctcgaatgactgtctctggcaagaagcagaccatgggctttgatgtt
cccagcacagcggagaacggcagcgtcactgcttcggttcgccgtggcggcagtcctgaa
aacgcaaacgtgacgcccgccacagaggccacctccaaacgtcctgagaccccgtctaaa
ggctcgaatggagacgagccctccccagttcccaccccaggccgcaagtcccgtcaagca
ctcaatatcaaggctgagctagagaagagacaggggggcaaacctctgttaaatctggta
gttataggtcatgtggatgcaggtaaaagtacgctgatgggccacctgctttatctgctg
ggcaacgtcaacaaacgtaccatgcacaagtacgagcaggagtcaaagaaggcgggcaag
gcctccttcgcctacgcttgggtgctggatgaaactggcgaggagagagacagaggtgtg
acaatggatgtaggcatgaccaagtttgagacgaactctaaggtggtgaccttaatggat
gcgcctggacacaaagacttcatccccaacatgatcacaggagctgcacaggccgatgtg
gccgtgcttgtggtggatgccagcagaggagagtttgaggcgggcttcgaggccgggggt
cagaccagagagcatgccctgctggtgcgttcgctgggcgtcactcagctcgctgtggcc
gtcaacaagatggaccaggtaaactggcaacaagagcgtttccaagaaatcatctccaaa
cttggccatttcctcaagcaggcgggattcaaggagtctgatgttttctacatccccacc
agcggcctgtcaggagaaaacctcgccaccaggagttcagtttcacagctcacctcctgg
tactctggtcccagcctgctggagcagattgatgccctcaaatctcctcagagatctgta
gacaaacctttcagactgtgtgtctcagatgtgttcaaagaccagggttcaggcttctgt
gtaacagggaagatcgaggcaggttacattcagactggggacagaatactggctatgcct
cctaatgaaacctgcactgtcaaaggaattactctacacgacgaggctctggactgggct
gcagcaggagaccatgtcagcctgacagtcaccggcatggacatcatcaagatcaatgtg
ggctgtgtgttctgtgatcctaaggagcctattcgagtctgtactcgattcagagcccga
atcctcctcttcaacatcgaggtccccatcacacaaggcttcccaatattgttgcattac
cagacagtcagtgagccggccaccattaggaaactggttagcgttctacacaagagcagc
ggtgaagtcctcaagaagaaaccaaagtgtttgagtaagggtatgaacgccattgtggag
atccagacccagaggccggtgtcattagagctgtacaaggactacaaggaactgggccgc
ttcatgctgcgatacgtaggctccaccattgctgctggtgttgtcactgagatcaaagaa
tga
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