Seriola dumerili (greater amberjack): 111236786
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Entry
111236786 CDS
T05606
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111236786 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111236786 (trip13)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
111236786 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
Viral_helicase1
AAA_14
AAA_25
AAA_24
TIP49
NPHP3_N
AAA_5
TsaE
AAA_17
AAA_28
RNA_helicase
AAA_7
NACHT
Cytidylate_kin
ATPase_2
RuvB_N
AAA_33
IstB_IS21
ABC_tran
AAA_30
bpMoxR
AAA_11
DUF815
ATPase
SLFN-g3_helicase
AAA_19
Mg_chelatase
Rad17
NB-ARC
DUF6393
PduV-EutP
NRBF2
Sigma54_activat
nSTAND1
PhoH
AAA_3
nSTAND6
NTPase_1
Motif
Other DBs
NCBI-GeneID:
111236786
NCBI-ProteinID:
XP_022621363
UniProt:
A0A3B4TRA8
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MEGDRMEVGNQKENINVEVHVKSHSTAKLSEVRMHVLALLNRHSMVFGNYRWTEFDEDFL
QNHVQSVAIVDLEEMVTQPLDLKSCSVSVHIFTLNEDGPSTLSLEDDEELSAANHWLLPA
AEFHGIWESLVYESGVKSQLLDYVTTTIYFSDKNVDSNLISWNRVVLLHGPPGTGKTSLC
KALAQKLSIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQQLIDDKDALVFV
LIDEVESLTAARNACQAGTEPSDAIRVVNSVLTQLDQIKRHSNVVILTTSNVTEKIDLAF
VDRADIKQYIGPPSEKGIYNIYLSCLEELMKCQIIYPRQQLFTMFELKTMGFAKSEVSEH
SLNLRNIALKSKGLSGRALRKLPFLAHALFVKSPTVTLERFLEAMDQAVDKQKEEKANLV
NGV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgacagaatggaggtgggaaaccagaaagaaaacatcaacgtggaggtccat
gttaaatctcacagcacagctaaactgtctgaggtgaggatgcatgttctggctctgctg
aatcgccacagcatggtttttggaaactacagatggacagagtttgatgaagactttctc
caaaatcatgtgcagtctgttgctatagttgatctagaggaaatggtaacacagcccctt
gatttgaaaagctgctccgtctccgttcacatcttcactctgaatgaggatggacccagc
acgctcagtttggaagatgatgaggagctttcagcagcaaatcactggttgttgccagca
gctgaattccatgggatttgggagagtctggtatatgagagtggagtcaaaagccagctc
ctggattatgtcacaaccacaatttacttctcagacaaaaatgtcgacagcaacctgatt
tcatggaaccgtgttgtgctgcttcatggacccccgggcacagggaaaacgtcactgtgc
aaagctcttgcccagaagctgtcaatcagactgtcgagtcggtattcttatggccaattt
gttgagattaacagccacagcttgttctcaaagtggttctcagagagtggcaagctggtc
acgaagatgtttcaaaagatccaacagctgattgatgacaaagacgctcttgtgtttgtt
ctgattgacgaggtggagagtctgacagcagctagaaatgcctgccaggcgggaacagag
ccttctgacgccattcgagtggtcaactctgttctcactcaactggatcagatcaaacga
cattcaaacgttgtgatcctgacgacctccaatgtgacggaaaagattgacttggcattt
gtggacagagctgacatcaagcagtacattggacccccgtctgagaagggcatctacaac
atctacctctcctgcctcgaggagctgatgaagtgccagatcatctacccccggcagcag
ctgtttaccatgtttgagctcaagacaatggggtttgctaagagtgaggtgtctgaacac
agtctgaacctgaggaacatcgctctgaaaagcaaaggtttgagtggaagagcactcagg
aagttaccatttctagcgcatgcactgtttgtgaagtcaccgacagtgacacttgagagg
tttctggaggctatggaccaagcggtggataaacagaaggaggaaaaagctaacctggtc
aacggtgtctga
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