Seriola dumerili (greater amberjack): 111236843
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Entry
111236843 CDS
T05606
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111236843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdu03021
]
111236843
03036 Chromosome and associated proteins [BR:
sdu03036
]
111236843
Transcription machinery [BR:
sdu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111236843
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111236843
Chromatin remodeling factors
BAF complex
111236843
PBAF complex
111236843
GBAF(ncBAF) complex
111236843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
111236843
NCBI-ProteinID:
XP_022621434
UniProt:
A0A3B4U122
LinkDB
All DBs
Position
Unknown
AA seq
1629 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYPMHKPMEGMNDKTMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGGGPTPPHMPPSQSGPMMPMDPQGGMSNMSNMSN
MAQQGRGPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPAPSASPYNRPPGMAMAPIG
GPQSSPCPTPAMQGHNQSTGPKPWSDAQGGDNQANAQKHLTPASSGRPSPAPPQATAVPA
GPMPGSSVTPQPPGQQVSPMLQMQQKQNRVTPIQKPQGLDPVGILQEREYRLQARIAHRI
QELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACMRRDTTLETALNSKAYRRS
KRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTR
AIANWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVA
NLTTLVYEHKAAQAAKEKKKRKKKKKKVDGDGEGTSAIGPDGEPMDESSQMSELPVKVIQ
TETGRVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEEEEEGAKAEMEEKK
IIDANGHVVSVKAAKHIIDSAKQDVDDEYSVPAGETSSQSYYGVAHAVIERVERQSSLLI
NGMLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIV
PLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQLRSGKFNVLLTTYEYIIKDKHIL
AKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLP
TIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPE
KVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICNHPYM
FQHIEESFAEHLGYPNGIINGPDLYRASGKFELLDRILPKLHATNHRVLLFCQMTSLMTI
MEDYFSYRNFQYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLLSTRAGGLGLNLQAADTV
VIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA
GMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETLNQMIARIEDEFELFMRMDMDRR
REDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEEEKMFGRGSRCRRDVDYSDTLT
EKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSRDDGSSKAKKRRGRPPAEKLSPN
PPRLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKERVR
NHKYRSVGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKDEVSEDDSD
EDDDDDDDESEAEAKSVRVKIKLSKEARSHDKGKKRQSRGKAKPVVSDDDSDEDQDDNDQ
SDKSKSDDE
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccctcagacacgtcaggtggtatgtcccatcctggcccttctccgggggca
ggtctatccccagggcccatcttgggccccagccctggaccggacccctcaccaggctct
gttcacagtatgatgggacccagtcctggacctggaacacccaatgcacctcatggcatg
cagggccaggggcaaagtgattactctcaggacagcatgtatcctatgcacaagcccatg
gaggggatgaatgataagacaatggcagacgcgatgcactttggtcacatgaaaggtgtt
gggatgagatctctgcacagtgggatggggcctccacagagtcctatggaccaacacagc
caaggatacatgtctccccatccatcccctatgggtgtccatgagcatgcttctagcccc
atgtcaggaggaggaggaggtgggggacccacgccgccccacatgcctccctcacagtca
ggtcctatgatgcccatggatccacagggaggcatgtccaatatgtccaacatgtccaac
atggcccagcagggacggggaccttctgctttcagcccggtccagctgcagcagctcaga
gctcagatcctcgcctacaagatcctgggccgcgggcaacccctgcctgaaaacctccaa
ctggctgttcagggcaagaggagcctacccacaatgcaacagcagcagcagcaacagcag
cagcaacagcaacagcagcagcagcagcagcagcagcaacaacaacaacagcagcagcag
cagcagcagcagcagcagcagcaacagcaacaacaacagcagcagcagcagcagcagcag
ccagcacctagtgccagtccttacaacaggcctccaggtatggcaatggcacctataggt
ggaccccagtcaagtccctgcccaaccccagccatgcaaggccacaatcaaagcacagga
cccaagccttggtctgatgctcagggtggtgacaatcaagccaacgctcagaagcacctc
acccctgcctccagtggacgcccgtcccctgcaccaccccaggccactgctgtgccagct
gggcccatgccaggcagctcggtgacccctcagcctcccgggcagcaggtgtcccccatg
ctacagatgcagcagaagcagaaccgtgtcacgccgatccagaagccccagggcttggat
ccagtggggatcctgcaggagagagagtacaggttgcaggctcggattgcacatcgcatc
caggaactggagagtctgccgggctccctgcctcctgacctgaggactaaagccacagtc
gagctcaaggcgctgcgtctactcaacttccagcggcagctgagacaggacgtggtggcg
tgtatgaggcgagacacaaccctggagacggccctcaactcaaaggcttacagacgcagc
aagcggcagacgctgagggaggcacgcatgactgagaagctggagaagcagcagaagctc
gagcaggaaaagaagcgcagacagaaacatcaggaatatctcaacagcattcttcagcat
gctaaggacttcaaagagtatcaccgctcagtttccgggaagatccagaaactcaccaga
gccatcgccaactggcacaccaacacggagcgggagcagaagaaggagaccgagagaatc
gagaaggagaggatgaggagactcatggcagaagatgaggaaggctaccgaaaactgatc
gatcaaaagaaagacaagcgtctggcctacctgctgcagcagacggatgaatacgtggcc
aacctcaccaccctggtgtatgaacacaaagccgctcaagctgccaaggagaagaagaag
agaaagaagaaaaagaagaaggtggatggagatggtgaaggcaccagcgccataggccct
gatggagagcccatggacgagagcagccaaatgagcgagctgccagtcaaagtgattcag
acggagactgggagggttttgcagggaacggatgctcccaaatccagccagctggaggcc
tggcttgagatgaaccctgggtacgaagtggccccgcggtcagacagcgaggagagcggc
tccgagtttgaggaggaggaggaagaggagggggccaaggcagaaatggaggagaagaag
atcatcgatgccaatggacacgtagtatctgtgaaagccgccaagcacatcatcgattcg
gccaagcaggatgtggatgatgagtacagcgttcccgctggagaaaccagctcccagtcg
tactacggcgtggcccacgctgtcattgagagggtggagaggcagtcgtcactgctgatc
aacggcatgctcaaacagtaccagatccaggggctggagtggatggtgtccctctacaac
aacaatctaaacggcatcctggctgatgagatgggcctcggcaaaaccatccaaaccatc
gccctcatcacctacctgatggagcacaagaggctcaacggtccctatctcatcatcgtc
cctctctcgactttgtctaattgggtctatgaacttgacaagtgggcaccgtctgtggtc
aaaatcgcttacaaaggcacccctgctttgcgccgtggactcgtgcctcagctccgcagc
gggaaattcaatgtcttgctgaccacctatgaatacatcatcaaggacaagcacatactg
gccaagattcgttggaagtacatgattgtggacgagggtcaccgcatgaagaaccaccac
tgtaagttgacccaggtgttgaacacacactatgtggctccccgccgcctcctcctcacc
ggtacaccactgcagaacaaactgcctgagctgtgggctttgctcaacttcctcctgccc
accatcttcaaaagctgcagcaccttcgagcagtggttcaacgcaccattcgccatgacg
ggagagagggttgacctcaatgaggaggagaccatcctcattattcggcgtttgcacaag
gtgctccgccccttcctgctccgcagactgaagaaggaggtggagtctcagctgccagag
aaggtggagtatgtcataaaatgtgacatgtctgccattcagaaggttctgtaccgccac
atgcagaaaggcatcctcctcactgacggctctgagaaagacaagaagggcaaaggagga
gcgaagaccctgatgaacaccatcatgcagctgaagaagatctgcaaccatccatacatg
ttccagcacattgaggaatcttttgctgagcacttgggttatccaaacggcatcatcaat
gggcctgatctgtaccgagcttctggaaagtttgagctactggatcgcatcctaccgaag
ctccacgccaccaaccacagagtcctgctcttctgccagatgacctcgctcatgacaatc
atggaggactacttcagctaccgaaactttcaatacctccgtcttgatggaaccaccaag
tcagaggatcgagcggcgctgctgaagaaatttaatgaggaaggatctcagtacttcatc
ttcctgctcagcacaagagccggcggcctgggcctcaacctgcaggccgccgacactgtc
gtcatcttcgacagtgactggaacccccaccaggaccttcaggctcaggaccgggctcac
cgcatcggtcagcagaatgaagtgcgtgtgcttcgtctctgcaccgtcaacagcgtggag
gagaaaatcctggcggctgccaaatacaagttgaacgtggaccagaaggtcattcaggcc
ggcatgttcgaccagaagtcctcgagccacgagcgccgcgccttcctccaggccatttta
gagcacgaggagcagaatgaggaggaagatgaggttcctgatgatgaaactcttaaccag
atgatcgcccgcattgaagatgaatttgagctcttcatgcgcatggacatggacaggcgc
cgggaggacgccagaaacccaaagcgcaagccgcgtctaatggaggaggacgagctgcct
tcttggatcatcaaagacgacgctgaggtggagcggctcacgtacgaagaggaggaggag
aagatgttcggccgaggatcacgctgccgtcgggacgtggactacagcgacactctgact
gagaaacagtggctacgggccattgaggatggaaacctggaggagatggaggaggagatc
cggctcaaaaagcgaaaacgcaagcgacgtcaggacaaggactcgtcgagcagagacgac
ggaagcagcaaggccaagaagcgacgtgggcgtccgccagctgagaaactctcccccaac
ccccccagactcaccaagcaaatgaacaccatcatcgacacagtgatcaactacagagat
gggtcagggagacaactgagcgaggtctttgtccaactaccgtccaggaaggagctccca
gaatattatgagctgatcagaaaacctgtggatttcaaaaagatcaaggagcgtgtgaga
aatcataaatacaggagcgtgggagacctggagaaggacgtgatgctgctctgtcacaac
gcccagaccttcaacctggagggatcccagatatacgaggactccattgtcctccagtct
gtgttcaagagtgccaggcagaagattgccaaggacgaagtgagtgaagatgacagcgat
gaggatgatgacgatgatgacgatgagtcagaggcagaggccaagtcggtgcgggttaag
atcaagctgagtaaggaggcgcgaagccatgacaaaggcaagaagaggcaaagccgaggg
aaggccaagccggtggtcagcgacgacgacagcgacgaggaccaggacgataatgatcag
tcagacaagagcaagagcgatgatgagtga
DBGET
integrated database retrieval system
