Seriola dumerili (greater amberjack): 111236897
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Entry
111236897 CDS
T05606
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111236897
Peptidases and inhibitors [BR:
sdu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
111236897
BRITE hierarchy
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GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
111236897
NCBI-ProteinID:
XP_022621520
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MEMLLRGNLRRGVGLCLLLLALVHEATGQRRKTGRRNNYRLHDDGGNASGMTCSLEVAFI
LDSSESAKIFLFEKQKAFVLSFSTRLATLQVAGWTLKVRMAALQYSSSVSIEHRFSAWKD
LDSYHGEVSTMNYIGHGTYTTYAITNASQLMVQETLPDSVRVVVLMTDGVDHPRNPDVIA
AAAEAKGHGIKFFAVGLSDIAQQSQNNAKLRAIASTPAQQFVQSLLDPQLEEKLLKEMVS
RVKMAACPQAQVCLCERGARGPPGSPGRKGDAGFRGSPGLKGARGEPGLNGRPGNDGPEG
RPGYKGSKGERGDCGTPGEKGDNGPEGPQGLRGLQGEQGSIGPPGDMGPEGPAGPKGDRG
PNGVSGPPGDIGIGFPGAKGEKGIQGRPGPTGSVGIGEPGLPGPLGPPGAQGNPGPRGEG
FPGPKGDRGYDGPRGNRGLPGVGVKGDKGSLGPPGIPGPLGAPGLGLQGEKGDQGPVGPA
GPRGAQGVGITGPKGNQGLTGEPGLPGERGLGEPGPKGDPGAEGLPGIPGLPGEDGASGQ
KGDLGLPGPRGPDGAPGKGVPGDKGDRGDRGTRGLPGAVGPVGPMGSKGDPGNMGPAGAS
GPPGRGIPGAKGEPGPQGPAGAVGEPGVGLSGPKGDRGSPGLAGPPGLKGEGFSGPPGLP
GPPGLSGETGPEGVGLPGPKGDRGLPGPPGPAGPPGIGLVGSKGSVGQMGSPGPQGLPGE
GIQGQKGESGFQGIPGPRGPPGQGLQGDKGDRGFRGDKGKKGERGEAGEPGTIGPLGRVG
QKGEPGLTRDEVIKIVRSICSCGVTCRQTPLELVFVIDSSESVGPENFNVIKDFVNALID
RASVSRDTTRVGVVLYSHINMVVVSLRQETTRDQIKSAVRSMTYLGEGTFTGSAIQQASQ
VFKAARPGVRKVAIIITDGQADKRDSVSLQSAVTEAHGSNIEMFVVGVVNESDPLYEEFK
KELSLMASDPDSDHVYLIDEFKTLPALERKLLSRICEDGERRLFSSIPNSRLPPGVAEVS
SNVREPPYRTDTDTPTFTGDFRRVQKVPGPPAPRLSLSKEPITAQRPKPDDRTATEAQRF
PFFDWEPFRPVTEFLPQFEVKKPSVNMVMTGAVGPAGPTLKVPSERTPAPSPPTPPLLPS
DSNMSAERCSQVLDPGPCRDYVVKWYYDATANSCAQFWFGGCLGNGNQFETEKSCKETCV
KA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgttgctgaggggaaacctgaggagaggagtggggctttgccttctgctgctg
gctctcgtacacgaggccacgggccagaggcgaaagacaggacgcaggaacaactacagg
ctgcatgatgatggaggaaatgcttcaggtatgacatgttcactggaggtggccttcatc
ctggacagctctgagagcgcaaaaatattcctgtttgagaagcagaaggcctttgtcctg
agcttcagcacacggctcgccacgctgcaggtagctggctggacgctgaaggtgcggatg
gctgcgcttcagtacagcagctccgtgtctatagagcacagattctcagcctggaaagac
ctggattcataccacggtgaagtcagcaccatgaactacatcggccacggcacctacacc
acctacgccatcaccaatgcttcgcagctgatggtgcaggagacgctgccagacagcgtt
agggttgtagtgctgatgacagacggggtcgaccatccccgcaaccccgatgtgattgca
gctgcagcagaggccaaaggtcatggcataaagttctttgctgtagggttatcagacatc
gcccagcagagtcagaataacgccaagcttcgggccattgccagcacaccagctcagcag
tttgtccaaagtcttcttgatccccagctggaagagaagctgctcaaagagatggtgagt
agagttaagatggcagcttgtccacaagcccaagtgtgtttgtgtgaaagaggagcgaga
ggtcctccaggaagcccaggtagaaaaggagacgcgggcttcagagggtcacctggtctc
aaaggagcgaggggagagcctggcttgaatggtcgacctggaaatgatggtccagagggt
cgtccaggttacaagggcagcaagggggagagaggagactgtggcaccccaggggaaaag
ggtgacaacggacccgagggacctcaaggcctacgaggcttacaaggagaacagggttca
ataggaccaccaggagacatgggtcccgagggcccagcaggacctaaaggagaccgagga
cccaatggtgtttctggaccaccaggggacatcggtattggattcccaggagccaagggt
gaaaaaggtattcagggaagaccgggtcccacaggttctgttgggataggagaaccggga
ctaccaggtcccctaggaccacctggagcacaaggaaaccccggaccgcgtggagagggg
tttccagggccgaagggtgatcgaggatacgatggtccaaggggcaaccgtgggcttcct
ggtgttggggtcaaaggtgacaagggcagtcttggaccacctgggattccaggtccactt
ggtgctcctggtttaggacttcaaggagaaaagggtgatcaaggcccagttggacctgca
ggacccagaggagctcaaggtgtcggaataacaggacctaaggggaaccagggcctcaca
ggtgagcctgggctgccaggtgagagaggactgggggaaccaggacccaaaggggaccca
ggggccgaggggttaccagggataccaggtctaccaggagaggatggagcctcgggacaa
aagggtgaccttgggttaccgggtcctcggggacctgacggggctccaggtaaaggtgtc
cctggagacaagggagacagaggggacagggggaccagaggcctgccaggtgcagttggt
cctgtggggccgatggggtcaaagggggatccaggaaatatggggccagcaggtgcaagt
ggaccaccagggaggggtatacctggtgccaagggggaaccgggtccacaaggtccagct
ggcgctgtgggagagccgggggtcggtttaagcggtcctaagggtgacagaggatcgcca
ggccttgctggtcctcctggactgaaaggtgaaggcttctccggccctccgggacttccg
gggcctcctgggttgtcaggagagactggaccagaaggtgttggtttacctggaccaaag
ggagacagaggcttgcctggacctcccggacctgcagggccgccaggaatcggcctggtt
ggttctaagggctcagttggccaaatgggatcacccggtccacaggggttacctggagag
ggcattcaaggacaaaagggggagtctggattccaggggatccccggccccagaggtcct
cctggacaaggactgcagggagacaagggggaccgagggttcagaggtgataagggcaaa
aagggagagagaggagaagctggagagccgggaaccatcggacctttgggtagagtggga
cagaagggagagcctggacttacaagagatgaagtcatcaaaatagtgagatccatatgc
agttgtggggtgacctgccgtcaaacccccctggagctcgtctttgtgatcgacagctca
gagagcgtcggccccgaaaacttcaacgtgattaaggacttcgtgaacgccctgatcgac
cgagcgtcggtcagccgggacaccacccgggtcggggtggtcctctacagccacatcaac
atggtggtggtcagcctcagacaggagaccacccgggaccagatcaagtctgcggtgcgc
tccatgacctacctgggcgagggcacgttcaccggcagcgccatccagcaggccagccag
gtgttcaaggcagcgcggccaggtgtgaggaaggtggccatcatcatcacagacggccag
gccgacaagagggactcggtcagtctgcagagcgcggtgacggaagctcacggaagcaac
atcgagatgtttgtggtcggggtggtgaacgagagcgaccctctgtacgaggagttcaag
aaggagctcagcctcatggcctccgaccccgacagcgaccacgtgtacctgatcgatgaa
ttcaaaacactcccagctcttgaaagaaaactgctgagtcgtatctgtgaagacggagag
aggcgtttgttcagctccatccccaactccagacttcctccaggagtcgctgaggtctcc
agtaacgtgcgggaacccccctacaggacggacacggacacacccaccttcacaggagac
ttcaggagagttcagaaagtgcccggccctccggcccctcgcctcagcctcagcaaagaa
cccatcactgcacagagaccgaagccggacgacaggaccgccacagaagctcagagattt
ccattcttcgactgggagcccttcagaccggtaacagagttcctcccacagtttgaggtg
aagaagccctcagtcaacatggtgatgaccggagccgtcgggccggctggtcccactctg
aaggtcccatctgagaggacaccagcaccctctccaccgacccccccgctgctgccctct
gactccaacatgtcagcggagcggtgcagccaggtcctggacccaggaccgtgtcgcgac
tacgtggtgaagtggtactacgacgccacggctaattcctgcgctcagttctggttcgga
ggctgtctgggaaacggcaaccagtttgagacggagaagagctgcaaagaaacctgcgtc
aaggcctaa
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