Seriola dumerili (greater amberjack): 111237004 Help Entry 111237004         CDS       T05606                                  Symbol nphp4 Name (RefSeq) nephrocystin-4   KO K16478   nephrocystin-4 Organism sdu  Seriola dumerili (greater amberjack) Brite KEGG Orthology (KO) [BR:sdu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:sdu03037]     111237004 (nphp4) Cilium and associated proteins [BR:sdu03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    111237004 (nphp4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DUF2155 DUF4305 Motif Other DBs NCBI-GeneID:  111237004 NCBI-ProteinID:  XP_022621655 LinkDB All DBs Position Unknown AA seq 1462 aa AA seqDB search MVKTDDITTVADGWKGVFDRSRLVPPPSQTVRLAVDSHFTQSHGFQLSLSRVTAAHLPQE IPEVEQDLTYQLRATLFDRNHQHFFGKTWRSQPQGMKNNKISFNEVLYFHTSLRLPSTVV VLELVALSPRPDGSQQAVGRGFAVLELFINRPDAQAADGDRRLDLHHGSPRSLLHPLLRD TADYSSLLKTIDGSHLDCVVKRHPALVSMMHLLPENVLVSGDENIPGLAASPTGDALLRP QLLKMLPFTLNRLTVSLQPSLEKFESQLLALINADCHNTKQPGPEGTLRTVVIQERRLHV GVHNGWCFLDKPQVVVLELVASGARGRADSTSRQSTLVKDSSAASPLPQVLGLRSSLQLK MTNHQALAVVFQLEYVFSAPVGRETMLSVTSSSRAAFLQCLRWGIWCPFREPADWKGEEL QLVLQGGAKPNPHGVMVYGTETSAKTQSSAPLSAPGTAQPVSKVKDTITFRLSSGLEGKA SSPKASLRTKQENASRQRRSPSSPSQGQRQIPAASPPDSPQGPGLSLSQLAATSRYPTIS HSSSALPWQQSFPSLLHPSPLASAHQLSHVACSAVSNIAHLEMGLQREEDVSSSAQNEGD QLQELPFTPVHAPVITLGMNVPRSCSVSSRSSLAHLYSAGFPEIMDCSGQVAEVLDPTEP VPFDPQREETDLLQGNLLVFQFLAFTRTPAAGVGPDWPDNIHFTFHFYRFPPVTSQQLKL LTSDKVQHKTSDPLPCVLASINKDGTVSSGSPGLQVQFRVDDSFLRPGEKRWFLRYLALH TMHIDIWDSTSLLLIGSTAIELKYMLRQGKSAVQALHEVEVLTTDYVGEDTLLTSTGLGR HTASGPMTVRTIVKGRLHVRTGNMGCPVDPSRRRAAAVTMSSHPHIITPREVTSSFRGGS LSSRNILQLNARNTAQARRLEMDGDRVPLFRRGIRPDNFAPGVHSSLNEPDGGRRKFNCM AAVHQREGREGVKAAKVTDETKEAQLAGELLQIKPSEERSKAESIANMLSQAITTQHLLY ASLGSAEYMEFVLKNPFNVPQTVTIHCDDPELSVITSTEEWHYFKALTRSPTPLEENMFH LEEGAPGPRVYLRPKESVHIPLKYQSFLCDHTMALQGPSFLPAGKGSQVAKKNLSNIVAA KTIKVTFKAEDDKPMAICQVNVEPTPHVVDQTFRLYHPELCFLKKAIRLPPWQDPTAGDP DAGAYISVRCSDPNIICQTRMLVPGEPQDVYLKVPGSPSPHIKMFFVMVFTDKWMAAPSQ IWQIYVHFLERVDVSCVTGQRTCQSLVLRGKQAVRKVKCFSSHPTEIEVDPDGVFILPPA AVQELQLKVQPWHAGSRFLYVNAVDVENQRLVTAWLLCLNVHQPVLSKAFEVCVPVGGGR GSSRKITYTNPYTSSRTFLLRSDHPDLLQFKDDKFQISGGESYTIGLRFAPSQSPGSVEI LVYVNNLEEKTEETFCVKVNYS NT seq 4389 nt NT seq  +upstreamnt  +downstreamnt atggtaaagacagacgacataaccaccgtggcggacggctggaaaggagtgtttgacaga agccggctggttcctccacctagccagacagtccgcctggctgtggatagccacttcacc caatcccacggcttccagctcagcctcagccgggtcactgcagctcacctcccgcaggag atcccagaggtggaacaagacctgacctaccagctgcgagcgaccctgtttgatagaaat caccagcacttctttgggaaaacatggagaagccaaccccaggggatgaaaaacaacaag atatccttcaatgaggtcctgtacttccatacgtctctgcggttgcccagcacggtggtg gtcctggagctggtggcgttgtcacccaggccagacggctcccagcaggccgtgggccga ggcttcgcagtcctggagctttttatcaacaggccagatgctcaggctgctgatggggac agaaggctggatctacaccatggatcaccgagaagcctcctccaccccctgctgagagac acagctgactacagcagtctcctcaagactattgatggttcccatttggactgtgtggtc aaaagacatcctgcgctggtttccatgatgcacctcctcccagagaacgtcctcgtctct ggagatgagaacatccccgggcttgcagcttctccgacaggagatgctctgctgaggcct cagctgctcaagatgctgcccttcaccctgaacagactgaccgtctccctccagccgtcc ctggagaagttcgagagtcagctgctggcgctgatcaatgctgactgccataacacaaaa cagccgggaccagagggcacgctgaggacagttgtcatccaggaaaggaggctccacgtc ggtgtccacaatggctggtgtttcctcgacaagccccaagtggtggtgctggagctggta gcctcgggggccagagggcgggcagacagcacctccagacagagcaccctggtcaaagac agctctgcagcgtcgcccctccctcaggtgttgggccttcgcagcagcctgcagctcaag atgaccaatcatcaggctttggcagttgtcttccagctggagtacgtcttctctgctccg gttgggcgagagactatgctgtcagtcacctcctcgtccagagcagccttcttgcagtgc ctccgttgggggatttggtgcccgttccgggagccggctgactggaagggggaagagctg cagctcgttctgcaaggaggtgcaaagccaaaccctcatggagtcatggtctacggcaca gagacgtctgccaagactcagagctcagcgccgctctcagctccaggcacagctcaacct gtctccaaggtgaaagatacgataacgtttcggctgtcatccggtctggaggggaaggcg tccagcccaaaggcatctctcaggacgaagcaggaaaacgcgtcacggcagaggagatcg ccttcatcgccctcacagggtcagagacagattcctgcagcttctcctccagattctcct caaggccccgggctctcactgtctcagctggcagctacttcacgctacccgaccatcagc cactccagctcggcgttgccgtggcaacagtcgtttccttctctgctccatccttccccg ttggcatcggcccaccagctgtcacatgtcgcctgctcagccgtcagcaacatcgcccac ctggagatgggccttcagcgggaagaggacgtgtcatcttcagctcagaacgaaggagac caacttcaggagctgcccttcacacctgtccacgcccctgtcatcaccctggggatgaat gtgccgagatcctgctcagtcagctccaggagctcgctcgcccacctctactcggccggc ttcccagagattatggactgcagcgggcaggtggcagaagtcctggatcccacagagccc gtgccctttgacccccagcgtgaagagacagacctcctacagggaaacctgctggtgttc cagtttctggcgtttaccagaacaccagcggcgggtgtcggccctgactggcctgacaac atccacttcaccttccacttttaccgcttcccaccggtcacatcgcagcagctcaaacta ctgaccagtgacaaggttcaacacaaaactagcgatccacttccctgtgtcctggcctcc atcaacaaagatggcactgtcagctcaggctctccaggtctgcaggtccagttcagagta gacgacagtttcctgaggccgggagagaagcgctggttccttcgctacctggcgcttcac accatgcacatcgacatctgggacagcacctcgctgctcctcatcggctctaccgccatc gagctcaagtacatgttgcgtcagggtaaatcagcagtgcaggctcttcatgaggtggag gtgctgaccaccgactacgtgggggaggacaccctgctgacgagcacaggtctgggtcga cacacggcctccggccccatgacggtccgcaccattgtgaagggccggctgcacgtacgc acaggcaacatggggtgcccggtagatccgagcaggaggagggcagcagccgtgacgatg tcgtctcatcctcacatcatcacacctcgagaagtcaccagcagcttcagaggaggaagt ctgtcctccagaaacatcctccaactcaacgcgaggaacacagcacaggcgcgccggctg gagatggatggggatcgcgtgccattgttcagacgcgggatcagacctgacaacttcgcg cccggagtgcacagctctctaaacgagcccgacggtgggcgccgcaagttcaactgcatg gccgccgtgcatcagcgggagggcagagaaggtgttaaagcagctaaggtcacggatgag acgaaggaagcccagctggccggagaacttcttcagatcaaacccagtgaagagcgcagc aaggcggagagcattgccaacatgctgagccaggccatcaccacgcagcacctcctctac gccagcctgggctccgccgagtacatggagtttgtcctcaaaaacccctttaatgtccct cagaccgtcaccatccactgtgatgaccctgagctcagtgtcatcaccagcacagaggag tggcattacttcaaagcgctaaccagaagtccgactccactggaggagaatatgttccac ctggaggagggtgctccgggtcccagggtttacctccggcccaaagagagcgtccacatt cccttgaagtaccagagcttcctgtgcgaccacaccatggcccttcaggggccgagcttc ttacctgcaggcaaaggttctcaggtggccaagaagaatctgtccaacattgttgctgcc aaaactatcaaggtgactttcaaagcagaggacgacaagccgatggccatctgccaggtg aacgtggagccgacaccccacgttgtcgaccagactttccgactttaccaccccgagctc tgcttcctgaagaaggccatccgcctgccgccctggcaggaccccacagccggagaccca gacgccggagcctacatttctgtacgctgcagtgacccgaacatcatctgccagacaagg atgctggtgccaggggagcctcaggatgtgtacttgaaagtgccagggagtcccagtcca cacataaaaatgttctttgtgatggttttcactgataagtggatggcagctccctcccag atctggcagatttacgtgcatttcctggagcgggtggatgtcagctgtgtgaccggacag cggacctgtcaatcactggtgctgaggggaaagcaggctgttcgcaaggtcaaatgtttc tcatcacaccccacggagatcgaggtggatccggacggcgtgttcattttgcctcccgca gccgtgcaggagctgcagctgaaggtgcagccgtggcacgccggcagccgcttcctgtac gtgaacgcggtggacgtggagaaccagcggctggtcaccgcctggctactgtgtctcaac gtccaccagcccgtgctgtccaaggcatttgaagtgtgtgtcccagtcggcggtgggcgt ggcagctcaagaaaaatcacctacaccaacccctacaccagcagccgcacgttcctgctg cgctcggaccatccggacctgctgcagttcaaagacgataaattccagatcagcggggga gagagttacaccatcggactgagattcgcccccagccagagtcccggctcagtggagatc ctggtctacgtgaacaacctggaggagaagacggaggagacgttctgtgtgaaagtcaac tactcgtga

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