Seriola dumerili (greater amberjack): 111237074
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Entry
111237074 CDS
T05606
Symbol
jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdu03036
]
111237074 (jmjd1c)
Chromosome and associated proteins [BR:
sdu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
111237074 (jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
111237074
NCBI-ProteinID:
XP_022621754
LinkDB
All DBs
Position
Unknown
AA seq
2920 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDKPPEIGDIGRWPWRSGVIRAVNHRDSDNPDLTVYVEFDDQ
EWEKREWVKVYEDFQLFLLEHQLVWAKRKEGAGGGAGAGGGAGGLLQATKAKHIQWPALA
FKPVVGKSLLSSVTAVEFLLDQQLDFLSDHSTFQPYQDEVDSQNPVLRDNPQLHEEVKGW
LKDQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQN
VDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNNTAHMAGGRPGGTTGNNQSHYT
RAQANSPRPIMTSSGPNPKGSQGTLASQQHSQLQQSQQPASQSHHSPSSSGREQREQRNS
RSSRRKGSDSSVPEEDKDRREESTGRDSKSKVKQAVNKRRKGEEDEKKAGLKRLKTDMTS
DLSESSDSENPHNKRTAHSSCSSSSSSSSSSSSSSSSSSSEPNSENELKTRTSDVKPSGV
SKMEEDEKPLIQGAKMNSSSSLIGRLSPWVELQAAEESKKGVVKETGKMIMKEVEELVAV
TQITQSPRQQSLIPDTIQGSIMESSKNTVKASSRSQTPLSSHLHGSGVIDITDDAQATVH
RESSEAVSALLASQKAESTALSPYLPLNPSPVSSPPIPPSPSPSEGGRRTDIEPPMHQQQ
QQGIIGVGVTAARSSGSKIEFAPSEVIRPVASMADNVVLVEKEKTVLPHHHLHHHQQQQH
HQPHTQQQQHYTSIHPGIKSPSLSEETRKHPQQQLPPHKMNTVLPPDLAKSKMSPSPNPS
QPQLDSLKQKPQHPNNSQSHPYPNTHPNEFLKVKSQPGLLDISKPKPNTSPEVSKHKIPR
YSDTSPPPTGRLSAKVETVESVRSGFKPVPARPESVGGGASGSTKSPLIIDKNETFTVYR
DPALVRSDTENSAAATVSSNHVAAYLHPHLHTLHSPSPHSPCLTPASHPHATSHLLAAPH
ASALPHPHLLPPGVLPAMPPPTASLLGGHPRLDSPGGLGHLGLPHPAAAHQQQFLQGQGP
PPPPLLTQAHSGAAGLGLYPILWQYPNGTPTSYPPGLNLPPTAKWVHPENPVTVNSEASL
RRNTASPWLHQAAGNAGEGLGLLSHVPVRPASADAHRPPVKINTHTSPPLSKTSMDVHKD
RDVDKKGFVDTIRTLTLAQLKQEQTDRSRTPTGKDVHLHRLYLDPLTKARLANTQDAVQA
ADRASKYKEENRQILKESIEVAPFTAKIQRSSDPGMDRDRERSRDSAFPVRIPALTSPSP
KASHTHPHVIQSEKSNYFTTLSNSVVNEPPRLYSSKELSSYYEKASVGAPGVVASIGAAV
PNQGALSLGSHSSKTSLSKPPPLIKHQPEGGEGLAGKITEQLNQQVTLVQQQHQHHTGID
RIERRSPAISPSSSTSSSSSSAPNHHHHHHHHHQQQQQHQLRAMPSLHRAPVFHPPTQHA
LERKEAAEREREREKEREKERERAGYGGRLSPPTLTPIQPVSLAATGSKTSAEQQKPPTL
LPELRDVKGHGNALAITSVASAISGEIMTSSTDRWRGGEIIQDRGVVYSGEKGVSRSKPQ
AAMASVIVRPSTAIKYDSSVGANKSGAMIHQDLPQGRFYPSKLQGECPRLGESVRDLGAG
RIIQPNSNMDDMCVQYKKTSVCGLQGTVGASTTNSVCRTVVSASSAFGIQSKCGTASREL
GYSVSARSEIAAHKTGIGGWVLGHSGPGEHPEGFGSRTTSPGGSLPPPSPAGTPQPSPCL
TPTPSSISGSTQPFSTSFVHLKKHKAALAAAQSRSNFCTAPTSITTGNSCLSVDSVDKAP
IHSSPPPPSSSQASSSSSVDSSSSSSASGSTTPGKSSPLPNGQSSGSASTSSGQPSNYHK
LKKAWLTRHSEEDRNTTATTSSTCTKPEKLPSTTTSTSNTSNTTAMSEMIKPCTVNLSAS
TSSEVEMSKDSGSKGERERQSEEKMGGTAGGGEERKAAPSSRRGNKRLYESASDSGGDDS
DASESKMEGRAKRQPKPTYKKKQNDMAKKKGDNEKEEDDGKPNGIFRSAREKTKLKLASS
NGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRVIRSKKGEEQAHSPVF
CRFYYFRRLSYSKNGVIRMDGFSTPDQFDDEALALWAPGAMDESHLDQTTAKYILSFIGD
KFCQMVVTENTAATWVKKDAKLAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDC
YKAKERRSSKDKELYSWLKCVKGQPHDHKHLMPTQIIPGTVLTDLVTSMHSLRDKHNIKS
HCPCTNKHNILTKLPATNGVSQVLQNVLNHSNKLSLVKAEPGSQQNSDPGATKAETNGGG
VGGSSPGSDGGSAPVTPPESQSPLHFLADLAEQKSREEKKENKESVLLGKSLKEDKEGES
LEVLQQCKTTSVVANSTEQGSTLRDLLTTTAGKLKLGSTDAGIAFAPVYSTASQTGKGGR
TMPNILDDIIASVVENKIPASRQNITTKLSIKQEPVPAGANNNNNAVNEDTKPDRKKSVP
VTAAVPEESTSQYPDIPHCWLNNRRLLWLKDHRNQNNWKLFRDCWKQGQPVLVSGIHKRL
NASLWKADSFNQEFADHQGDLLNCKDQVVSNSGIKEFWDGFEDITKRPKSKDGEPMVYRL
KDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGNLNLASHLPSFFVRPDLGPRLCCAYG
VAASQDQDFGTANLHVEVSDVVSVLVYVGVAKGNGVLSKTGVLKRLEEEDLDEGVRRRLK
DSSETPGALWHIYLNRDMDKVREFLHKLCKEQGLEVSLDQDPIREQGWYLSRKQRQRLLD
EHGVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQVINDFVSPEHVANSFHLTQELRPSK
EEVNYEDKLQVKNILYHCVKEAVSSLKRSSSEEDDEEENS
NT seq
8763 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcggccggagctggtcgggaagcggttcctctgtgtcagcggggac
aagccgcctgaaatcggcgacatcggtcggtggccgtggaggtccggggtcatacgagcc
gtcaaccaccgtgacagcgacaatcccgacctgacggtatatgtggagtttgatgatcag
gagtgggagaagagagagtgggtcaaggtctatgaggatttccagctgtttctactggag
caccagctggtctgggccaagaggaaggagggagcaggaggaggagcaggagcaggtgga
ggagcaggaggcctgctgcaggcaaccaaggccaaacacatacagtggcctgccctggcg
tttaagccagtggtggggaagagcctgttgtcgtcagtaacagcagtggaattcttgtta
gaccaacagctggacttcctttcggaccattcaaccttccagccataccaggatgaggtg
gacagtcagaacccagtgttaagagacaaccctcagctccatgaagaagtgaagggctgg
ctgaaagaccagaaggtgcaggaaattttcatgcaaggtccctattcgttgaatggctac
cgtgtacgtgtgtatagacaagactcggccacccagtggttcactggcatcattacacac
cacgacctcttcagtcgaaacatggtcgttatgaatgaccaggtgctagagcctcagaat
gtggatccatccatggtccagatgacctttctggatgatgtggtccactcccttctgaaa
ggagaaaacatcggcatcacctccagacgaaggtcacgatccagccagaacaataacact
gcccacatggcaggagggagacccggcgggaccactggcaacaatcagagtcattacacg
cgagcccaagccaacagcccccgccccatcatgacttcatcaggccccaacccaaaaggt
tcccaggggacgctggcctcccagcagcacagccaattgcagcaaagccagcaaccagcc
agccaatcacaccactcacccagcagcagtggacgggagcagagagaacagcgcaactct
cgctcatccaggaggaaaggatcagacagcagcgttccagaggaagacaaggacaggaga
gaggagagcacagggagagactccaagtccaaggtgaagcaggcggtgaacaaacgtaga
aagggtgaggaagatgagaagaaggcaggattaaagaggctgaagactgacatgacgtct
gatctgtcagagagcagtgactcagaaaacccacacaacaagaggactgcccactcctcc
tgctcctcttcctcctcatcgtcttcgtcatcctcctcctcgtcctcttcctcctcctca
gagcccaactctgagaatgaacttaagactcgcaccagtgatgtaaaaccaagtggggtt
tccaaaatggaggaagacgagaagccgctaatacagggtgccaaaatgaacagttcctca
tctctcattggtcggctgtccccatgggtggagcttcaagcagcagaggagagcaagaag
ggtgtggttaaggaaacgggcaaaatgataatgaaggaggtagaggaattggtcgcagta
acacagatcacccagtctccacggcaacagtctctgattcctgacaccatccagggcagc
attatggagagcagcaagaacactgtgaaagcatcttctcgatcccagaccccgctgtcg
tcccacctccatggcagtggtgtgatcgacatcacagatgacgcccaggccacagtgcac
cgcgagagttcagaggcagtgtcagcgctgctcgcctcccagaaggctgagtccactgcc
ctctcaccttatcttcccctcaacccctcccccgtctcctcacctcccattccaccctct
ccctcaccatcagagggaggccgcaggacagatattgaacctcccatgcatcagcagcag
cagcaaggcataataggagttggtgtgacagcagccaggagctcaggcagcaagattgag
tttgctccctctgaggtcatcaggcctgtcgcatcaatggctgataacgtcgtgctggtg
gagaaggagaaaaccgtccttcctcatcatcatcttcatcatcatcaacagcagcagcat
catcagccacacacacaacaacagcaacactacacatctatccaccccggcattaagagc
ccgtctttatctgaagagacgagaaaacatccacaacaacaactgcccccccataagatg
aacacagtcctcccacctgacttagccaaatccaaaatgagccccagcccaaaccccagc
caacctcagctcgactccctgaaacagaaaccccagcaccccaacaactctcagagccac
ccctaccccaacacacacccaaatgaatttctcaaagttaagtcccagccaggcctgctg
gacatctccaaacccaaacccaacacctccccggaggtctctaaacataaaataccaagg
tactctgatacctcgccccctccgacaggccgtttgtctgctaaagtagaaacagtagaa
tctgtgcggtctggttttaagccggtgccggcgcggcctgagtcagttggaggcggtgca
agcggcagcaccaagagccccctgataatcgataagaacgaaaccttcactgtttacagg
gacccagcactggtccgctccgacacagagaactctgctgcagccaccgtctcttccaac
cacgtggcagcctatctccacccccacctgcacaccctgcactccccgtccccccactcc
ccctgcctcacccctgcatcccacccccacgccacttcccacctcctcgccgctcctcac
gcctctgccctacctcatccgcaccttttaccccctggggtgctcccagctatgcctcct
cccacagcatctctccttgggggacaccctcggcttgactcccctggcgggttgggccac
ctcggcctacctcacccagcagccgcacaccagcagcagtttctacagggtcagggcccc
cctccaccccctctactaacccaggctcacagcggggcagcagggctgggcctgtaccca
attctctggcagtaccccaatggaacaccaacctcctaccccccaggactcaaccttccc
cccacagctaagtgggtccaccctgaaaatcctgtcaccgtgaattctgaggcatctctc
aggaggaacacagccagtccatggctgcaccaggctgctgggaacgctggtgagggtctg
ggtttgctgagccacgtccctgttcggccagcaagcgccgacgcccaccgcccccctgtc
aagatcaacacacacacaagccctccactgtcaaagaccagcatggatgttcataaagac
agagatgtggataagaaaggctttgtggacacgatcaggactctgacgttggcccagctg
aaacaggagcagacggacaggagtcgcacccccacagggaaggacgtccacttacaccgt
ctctacctggaccccctcaccaaggctcgcctggcaaacacacaggatgcagttcaggcg
gcagatcgagccagtaaatacaaagaagagaatcgtcaaatcctgaaagagagcatcgag
gtcgctcccttcaccgcgaagatccaacgctccagtgaccccgggatggaccgagacaga
gagcgaagcagggactctgccttccctgtccggataccagctctcacctcccccagcccc
aaggccagccacacccatccccatgtcatccaatcagaaaagagcaactacttcaccaca
ctgtccaacagtgtagtgaatgagcctccaagactgtactcctccaaggagctcagctct
tattatgagaaagcatccgttggagctccaggggttgtagccagtattggggccgctgtg
ccaaaccagggagctctgtccctgggcagccacagctccaaaacctccctctccaagccc
cctcctctcatcaagcaccagccagagggaggagagggtttagcagggaaaatcactgag
cagctcaaccagcaggtaacactagtccaacagcagcatcagcaccacacaggtattgac
aggatagaacgccgcagccctgccatttctccttcctcttctacgtcctcctcttcctct
tcagcccccaaccaccatcatcatcaccaccatcaccaccaacagcagcagcaacaccag
ctcagggcaatgccatcgctccaccgagcgcctgtcttccatccccccacgcagcacgcg
ctggaacggaaagaggctgcagagcgagagagggagcgagagaaggaaagggagaaagaa
agggagagagcaggttatggtggacgcctgtctccacctaccctcacacccatccagcca
gttagcttagcggcaactggtagcaaaacatcagcagaacagcagaaacctcccacactg
ctgccggaactcagggacgtcaaaggtcatggaaatgctctcgccatcacctctgtggcc
tctgccatcagtggggagattatgacttcatcaacagacaggtggagaggtggagagata
attcaggatagaggagtagtgtactctggagagaaaggagtgtcgaggagcaagccccaa
gccgcaatggcatcagtcattgtacgtccatcgactgccattaagtacgacagttctgtt
ggtgctaacaaatctggtgctatgatccatcaggatcttccccaggggaggttttaccca
tccaagcttcagggggaatgtccccggttaggcgagagtgttagagaccttggagctggt
aggattatccaacccaactcgaacatggatgacatgtgtgtccagtataaaaagacttct
gtgtgtggcctgcagggaactgtgggagctagtaccacaaactctgtgtgcaggactgtc
gtttcagcctcctcagcttttggcatacagagtaaatgtgggacagcctcccgtgagctg
ggttactcagtttccgctcgcagtgagattgcagctcataaaactggcattggtggctgg
gtgctgggtcactcaggaccaggagagcacccggagggctttggctcacgtaccacatct
cctgggggatcactgcctccccctagtccagcagggacaccccaaccaagtccatgccta
accccaacacctagctccatttctggctccactcagcctttctccacctcctttgtccat
ctcaagaagcacaaagctgctttggctgcagctcagtccagaagcaacttctgcacagct
cccacatccatcacaactggaaactcctgcttgtctgtggattcagtcgacaaagctccc
attcacagctccccacctccaccctcctctagccaagcctcctcctcgtcatcagttgac
agcagtagcagcagctctgcaagcgggagcacaacaccaggcaagtccagtcccctgcct
aacggccagtcctcaggatcagcctcaacaagcagcgggcagcccagtaactaccacaag
ctgaagaaagcctggttaacccgccactcagaggaggacaggaacacaactgctacaaca
agttccacctgtacgaaaccagagaagctgcccagcactaccaccagcaccagtaacact
agtaacaccactgccatgtcagaaatgatcaaaccatgtacagtcaatctcagcgcctcc
acctccagtgaagtggaaatgagcaaggacagtggaagcaaaggtgagagagagagacag
tcagaggagaagatggggggaacagcaggaggtggggaggaaaggaaagcagctccttca
tcaaggcgagggaacaaacggttatatgagtctgcctcagatagcggaggagatgactca
gacgccagtgagagcaagatggaggggcgggccaaacgccagcctaaaccaacctacaag
aagaaacagaatgacatggccaagaagaaaggagacaatgaaaaggaggaagatgacggg
aagcccaacggcatcttcagatcagcccgagagaagaccaagctgaaactggccagcagc
aacgggatcccccgctcagtgctgaaggactggaggaaggtgaagaagctgaagcagaca
ggggagtctttcctgcaggatgactcgtgttcagaaattggccccaacttgcagaagtgc
cgtgagtgcagggtgatccgcagcaagaagggagaggagcaggcacattctcctgtcttc
tgtcgcttctactatttcagacggctttcctatagtaaaaatggagtcattaggatggat
ggcttctccactccagaccagtttgatgatgaggccctggccctatgggcccctggggca
atggacgagagccacctggaccaaaccaccgccaaatacatcctcagcttcataggagac
aagttctgtcagatggttgtgactgagaatactgcagctacctgggtcaagaaggatgct
aagctggcgtggaagcgagcggtgagaggggtgagagagatgtgtgacgcttgtgaggca
acactcttcaatatccactgggtctgtcagaaatgtggctttgtggtctgcttggactgc
tacaaggccaaggagaggaggagctccaaagataaagaactgtacagctggctgaagtgt
gtgaaaggccaaccccacgatcacaaacacctgatgccaacacagatcatacctggcaca
gtcctgacagatttggtgacttccatgcactcgctgagagacaaacacaacatcaaatcc
cactgtccctgcaccaacaaacacaacatcctcaccaaactaccagccaccaatggagtc
tcacaggttctgcagaacgtcctgaaccatagtaacaaactgtctctggtaaaagctgag
ccgggctctcagcagaactctgatccaggagcaaccaaggcagagactaacggaggaggt
gttggaggaagcagcccaggcagcgacggaggaagtgctcctgtcaccccaccagagtct
cagtcacctctgcacttcctggctgacctggcagagcagaagtccagggaggaaaagaaa
gaaaacaaggagtcagtgttgctgggtaaatcactgaaggaagacaaggagggagaaagc
ctggaggtgttgcagcagtgtaaaaccacctcagtggtagctaacagcacagaacagggc
tccacactcagagatctgctcaccaccaccgcagggaaactgaagctgggctctactgat
gcaggaatcgcctttgcaccagtctactctactgcttcacagactggaaagggtgggcgg
accatgcccaatatcctcgatgatatcattgcttcagtagttgagaataaaatccccgcc
agccgccagaacatcaccaccaagctgtcaatcaagcaagagccggtccctgcaggcgct
aacaacaacaacaacgccgttaatgaggataccaaaccagacaggaagaagtcagtgcct
gttactgcagctgtgccagaggaatcaaccagtcagtacccagacattccccactgctgg
ttaaacaacagacggttactgtggctcaaagatcaccgcaaccagaacaactggaagcta
ttcagagactgctggaaacaaggacagcctgttctggtgtcagggatccacaagcgactg
aacgccagtctgtggaaggcggactccttcaaccaggagtttgcagaccatcaaggagac
cttctcaactgtaaagaccaggtggtgtccaactccggcatcaaggagttctgggatgga
tttgaggacatcaccaagcggcccaagtccaaggatggagaacctatggtctacagactg
aaggactggccgtctggagaggagttcatggccctcatgccctcaagatacgatgacttg
atgaagaacctgcccctgccagagtactctgatccagaggggaacctcaacctggcgtcc
cacctgccatctttctttgtcaggccagatctggggccgagactctgctgtgcctacggt
gtagctgcgtctcaggaccaggactttgggactgccaaccttcatgtggaagtgtcggat
gtcgtgtctgtgctggtttatgttggagtagccaaaggcaacggagtcctgtccaaaact
ggagtgttgaagcgtctggaggaggaggatctagatgagggagtccggaggaggctcaaa
gactccagtgagacaccgggggcgctgtggcacatctacctcaacagggacatggacaaa
gtccgagagttcctgcacaagctctgtaaggagcagggattggaagtgtcgctggaccag
gacccaatcagagagcagggctggtatctgagcaggaagcagcgtcagcggctgctagat
gagcacggagttcagggctggactgtagttcaattcctgggagactctgtccttatacct
gcaggggctatgcaccaggtccagaacctccacagctgtgttcaggtcatcaatgacttt
gtgtcccctgagcatgtggccaactccttccatctgacccaggagctccggcccagtaaa
gaggaggtcaactatgaggataaactacaggtaaagaacatcctgtaccactgtgtgaag
gaggcagtgagctccctgaagaggagcagctctgaggaggacgatgaggaggagaactca
tga
DBGET
integrated database retrieval system
