Seriola dumerili (greater amberjack): 111237086
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Entry
111237086 CDS
T05606
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdu03016
]
111237086 (trub1)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
111237086 (trub1)
Transfer RNA biogenesis [BR:
sdu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111237086 (trub1)
Prokaryotic type
111237086 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
111237086
NCBI-ProteinID:
XP_022621772
UniProt:
A0A3B4UVZ0
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MAGNISNSAAPISSSLSKLQSLNGLFAIYKKQGPTSADVLNALKEALLREAGVENPNPRK
RRKQSLKMGHGGTLDSAASGVLVVGVGNGTKMLTTMLTGSKKYVAVGELGKATDTLDATG
SVILEKDFKHITRLDIEEKLKSFTGDIMQVPPLYSALKKDGQRLSVLLKQGHSVEAKPAR
PVTVYNLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKDLIRTKQGQFTLE
EHTLHEEQWTLGDILRSLQNCSESEQRVDCTTAAEADS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaacatcagtaactcagcggccccgatatctagttctctgtctaaactgcag
tctttaaatgggttgtttgcgatatataaaaaacaagggccgacatctgcagacgtgttg
aatgcactcaaagaagctttactcagggaagctggagtagaaaacccaaacccgcgaaag
agaaggaagcagagcctaaagatggggcacggagggaccctggacagtgctgccagtggg
gtgttagttgttggtgttgggaatggcacaaaaatgctcactaccatgttaactggttca
aagaaatacgttgctgtgggggagctgggtaaagcaacagacactcttgatgctacaggc
agtgtgattctggagaaagacttcaagcacataaccaggttggacattgaggagaaactg
aaatcttttaccggtgacatcatgcaagttcctccactctactctgctctgaagaaggac
ggccagcgtctgtctgtcctgctgaagcaaggtcacagtgttgaggccaagcccgccaga
ccggtcactgtgtacaacctgaccctgcaggagttcaaacctcctctcttcactctggat
atagagtgtggtggtggattctatgtcaggagcttggtggatgacctgggaaaagctctg
tcgtcatgtgctcatgtgaaggacctgatccggaccaagcagggccagttcacgctggag
gagcacaccttacatgaggagcagtggacactgggagatatcttgcgctctctgcagaac
tgctcagagtcagagcagcgtgtggactgtacaacagcagcagaggcggacagctaa
DBGET
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