Seriola dumerili (greater amberjack): 111237145
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Entry
111237145 CDS
T05606
Symbol
irf2bpl
Name
(RefSeq) interferon regulatory factor 2-binding protein-like
KO
K22383
interferon regulatory factor 2-binding protein
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111237145 (irf2bpl)
04121 Ubiquitin system [BR:
sdu04121
]
111237145 (irf2bpl)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
111237145 (irf2bpl)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Atypical E3
111237145 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
111237145
NCBI-ProteinID:
XP_022621843
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MSSPQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARHLKRA
HGFQEGRTPAGGPPPPPQQQPAVAKSQAVLLTGKEPVGQLNHHHHLADAPGKSQQPGLDR
YSLGADTRARFDYSGHSSSSRLPNGLGGPNGFKPDDGPPELNRQSPNSRSRSHGGLVSAP
GQMNVPPNLLPQTLLNGPAPHGMASRAAPQGSMVGVSLPGQVGLSEPGGKRPASVSSTDQ
ERELKEKQRNAEALAELSESLRNRQEEWTSKPKTVRDTLVTLSGCTPFDVRFKKDHGLVG
RVFAFDAVSKPGMDHELKIFIEYPSGSGNVFSSASGVAKQMYQDCMKDFGRGLSSGFKYL
EYEKKHGSGDWRLLGDLLPESLRFFKEGLGGDMLPQPYIDGSYPLLPTSLVLPGRALASG
SGNSGSRAGVRKRKASPEPDSAEGGLKLTEEQQRQQWINSQTEALKLSMAAGSFAGPPPP
LGPGHPGLSSGRATPPESAAPQQNGQSPMAALMSVADTLGNAHSPNKDRDSVHSTTSSSR
HNSSSPVSPASVSGQRRLSSRNGDLGLSAPSQSAGGMDQVHAQNVPDSPMANSGPLCCTI
CHERLEDTHFVQCPSVPNHKFCFPCSRESIKAQGASGEVYCPSGEKCPLVGSNVPWAFMQ
GEIATILAGDVKVKKERDP
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccgcaggtctcctcgtcccgcagacagtcatgttatctgtgcgacctgccc
cgcatgccctgggccatgatctgggacttcaccgagcccgtttgtcggggctgcgtcaac
tacgagggcgcggaccggatcgagttcgtcatcgagacagcccggcacctgaagcgggca
cacggtttccaggagggcagaactcccgcagggggaccgcctcctccgccgcagcagcag
cccgccgtggcgaagagccaggcggtgttactgaccgggaaggagccggtggggcagctc
aaccaccaccaccacctggcggacgcaccggggaagtctcaacagcccggtttggaccgg
tactcgctcggtgcggacacccgggctcggtttgactacagcggacacagcagcagcagc
aggctgcctaacggactcggaggaccgaatgggttcaaaccggacgacggaccgccggag
ctgaaccgacagagtccgaactcgaggagcaggagccacggggggctggtgtcggcgccg
ggacagatgaatgtgccgccgaacctgctgcctcagaccctgctgaacggaccggccccg
cacggcatggcgagcagagccgccccgcagggctcgatggtcggcgtctctctgcccgga
caggtcgggctgtctgagccgggagggaagcgacccgcctcggtgtccagcacggaccag
gagcgggagctgaaggagaagcagcggaacgcggaggctctggccgagctgagcgagagc
ctccggaaccggcaggaggagtggacgagcaagccgaagacggtgcgggacacgctggtc
actctgtccggctgcaccccgttcgacgtccgcttcaagaaagaccacgggctggtcggc
agggtgttcgccttcgacgccgtgtccaaacccggtatggaccacgagctgaagatcttc
atcgagtacccgagcggctccgggaacgtgttctccagcgcctcgggggtggccaagcag
atgtaccaggactgtatgaaagacttcggcagaggtttgtcctccgggttcaagtacctg
gagtacgagaagaagcacggctccggggactggcgtctgctcggggatttattaccggag
tccctgcggttttttaaggagggtttagggggagacatgctgccgcagccctacattgac
ggcagctacccgctcctccccacctccctggtccttcccggccgagctctggcctcaggc
agcgggaacagcggctccagggccggggtgaggaagaggaaagcctcgccggagccggac
tctgcggagggcggcctgaagctgacggaggagcagcagaggcagcagtggatcaacagc
cagaccgaagccctcaagctctccatggctgcgggctccttcgccggaccccctcctccg
ctcggcccgggacaccccggcctctcctccggccgcgccacgcccccggagtccgcggct
ccgcagcagaacggacagtccccgatggccgcgctcatgtcggtggcggacacgctcggg
aacgcgcactcccccaacaaggacagagactcggttcactccaccacctcctcctccaga
cacaacagcagcagcccggtgtcccccgcctccgtgtccggacagaggcgcctctcgtcc
cgcaacggagacctcgggctgtccgcgccctctcagtccgcaggtggtatggaccaggtg
cacgcgcaaaacgtgcccgactcccccatggccaacagcgggcctctgtgctgcacgatc
tgccacgaacggttagaggacacgcatttcgtgcagtgtccctccgtccccaaccacaag
ttctgcttcccctgctccagagagagcatcaaggcccagggagcctccggggaggtgtac
tgccccagcggggagaagtgcccgctggtcggctccaacgtgccctgggccttcatgcag
ggggagatagccacgatcctggccggagatgtgaaggtaaagaaggagagagacccctga
DBGET
integrated database retrieval system
