Seriola dumerili (greater amberjack): 111237189
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Entry
111237189 CDS
T05606
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111237189 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111237189 (rad54b)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
111237189 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
111237189
NCBI-ProteinID:
XP_022621898
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MRRSAAPSQLLGNAVKKPRFVPPGASTSSHMAESKPLTPKPGLVNALEKVQRSLAAPAQS
KTGCDVQPKAGQAAPALSRALARILSATESKENEEETEYSDAGTRDYAEDNRPAGVNGSP
QLTPKSPQTPQPPAGSACVNGAAGSDSACGQDGARYLSVMWCKASKKKHKRWEGDAVLVT
RGRTATLKDMEGKDIGKGSGYKVSELASLSEGQTLMIGGKEVEVMGIISAEDFARGRCFQ
EVQIEKEEPHIKSAPPPPRCFASKPFCPPTQVGRAEHPGTKPEEEQTSRPRHDPFAPGAL
VMPRPSPNHQWSNNKSGLPVVDVVVDPYLTTHLRPHQRDGLLFLYECVMGMRAVGRYGAI
LADEMGLGKTLQSVALSWTMLKQGPYGGRPVAKRILVVTPGSLVQNWGAEFNKWLGRERI
CVFTVDQDHRIEQFVLSPLHSVLVISYEMLLRCLEQVQKVEFGLVICDEGHRLKNSSIKT
SSALSSLSCNRRVILTGTPVQNDLQEFYAIIDFVNPGILGSSTAYRKVYEEPILRSRQPS
CREEERVLGEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCDPSPLQLELYRHLL
CHRVFRACLQSSTQTHTHLACITALKKLCNHPGLLHSTVKERTDHGSMESSLYDGLVDLF
PESYSSGGFSTADSGKLLVLSDMLTAIKQLSPSDRVVVVSNYTQTLDLLQDLCVHMGYTF
CRLDGQTPTSQRQRLVDSFNSPYSQNFVFLLSSKAGGVGLNLIGASHLVLYDIDWNPAND
IQAMARVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSTN
ELRDLFSLTDTPSLTHDLLNCSCSMDGSVQAVTEEEDQVSDRSCQLGRQGDRRGGTAQKH
LSMSELMQWRHFSGDTHTFSDPYLDHARNHITFAFQTTISHTAQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctcagcagctcccagccagctccttggaaatgcagtgaaaaagcctcgattt
gtgcctcccggagcgtctacttcatctcacatggctgagtccaagcccctgaccccgaaa
cctggattagtcaatgcactggaaaaggttcagagaagtctagcagcacctgctcagagt
aagacaggctgtgatgtccagccgaaagctggacaggctgctccagccttgtccagggct
ctggctcgtattctcagtgcaacggaaagtaaggaaaatgaggaggagacagaatattct
gacgctggcaccagagactacgcagaagacaacagaccagcaggagtgaatggttctcct
cagttgactcccaagtctcctcaaaccccgcagcctcctgcaggctcagcctgtgttaat
ggagctgcaggctcagactctgcctgcggtcaggatggagcacgttacctcagtgtgatg
tggtgtaaggccagtaagaagaaacacaagcgctgggagggtgatgctgtcctggtgaca
agagggcgcacagccacacttaaagacatggagggaaaggacatcggaaaaggtagtggc
tacaaggtgtcagagttggcctctctctctgagggacagaccctgatgatcggtgggaag
gaggttgaggtgatgggcatcatttctgctgaggactttgccaggggacgttgtttccaa
gaggtccaaatagagaaagaggagccacacataaagtcagctccaccccctcctcgttgt
tttgcatccaaaccgttctgccccccaacccaggtaggaagagcagagcatccaggaacc
aaaccagaggaggaacaaacctctaggcctcgccatgacccctttgcaccgggtgcactg
gtgatgcctcgtccatcccccaaccaccagtggtctaataacaagtccgggcttcctgta
gttgatgttgtggttgacccatacctgaccactcacctgagaccccaccagagagatggc
ctgctcttcctctatgagtgtgtcatgggcatgagggctgtgggtcgctacggtgctatc
ctggctgatgagatgggtctggggaagaccctgcagagcgtggcactgtcctggaccatg
cttaagcaggggccgtacggtgggagaccagttgctaagcgtatccttgtggttacacct
ggcagcctagttcagaactggggtgcagaatttaacaagtggctgggccgtgagaggatc
tgcgttttcactgtggatcaggaccacaggatagagcagtttgtgttatctcctctgcac
agcgttctagtgatcagctatgagatgctgctgcgctgcctggagcaggtacaaaaagtg
gagtttggtcttgtaatttgtgatgagggtcacagattaaagaacagcagcatcaaaacg
tcctctgctctcagtagcctcagctgtaatcgcagggtcatacttacaggcaccccagta
caaaacgacctgcaggagttctatgctattatagattttgttaacccagggattcttggg
tcatcaactgcttataggaaagtgtatgaggagccaattctacgttccagacaaccgtcc
tgcagagaggaggagagggttttgggagaagagcgtgcagctgagctctcccgtctgact
ggcatgttcatcctgaggcggacacaggagatcatcaaccgctacctgcctcctcgtctc
gactggacgttgttttgtgacccgtcccctctgcagctagagctttacaggcatctcctg
tgccatcgagtcttcagagcctgccttcagagctccacgcaaactcacacacaccttgcc
tgcatcactgcactgaagaagctctgtaaccaccctggtctgctccactctactgtcaag
gagagaacagaccacggatcaatggagagctcattgtatgacggtctggttgacctcttc
ccagaatcctactcttcaggaggattcagcactgctgattctggaaaactgctggttctg
tcggacatgctgactgccatcaaacagctcagcccttcagacagggtggtcgtggtgtct
aactacactcagacacttgacttgctccaggacttatgtgtgcacatgggctacaccttc
tgccgactagatggacaaacacccaccagccagagacaacggctggttgatagttttaac
agcccctattctcagaactttgtgtttctgctgagctctaaagcaggaggggtggggctt
aatctgatcggcgcgtcccacctggtgctgtatgatattgactggaaccctgccaatgac
attcaggccatggctcgagtatggagagatggacagaagaagactgtgcacatctaccgt
ctcctcactgcaggtaccattgaggagcgtatattccagagacaggtgtccaaacagggg
ctttctgggactgtggttgacctgggcaaaggggcggagcacacaagcttctccaccaat
gaactgcgagatcttttcagcctgacggacactccgtctctaactcacgacctgctgaac
tgcagctgcagcatggacggctcagtccaggctgtcacagaggaggaggaccaggtctct
gataggtcatgccagctcggtcgtcagggtgaccgtagagggggtacggcgcagaagcat
ctcagcatgtccgagttgatgcagtggagacatttctctggtgacacacacaccttctca
gacccctacctcgatcacgcacggaaccacatcacattcgccttccagaccaccatctct
cacacagctcagtaa
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