Seriola dumerili (greater amberjack): 111237388
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Entry
111237388 CDS
T05606
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04261
Adrenergic signaling in cardiomyocytes
sdu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
111237388
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
111237388
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111237388
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111237388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
Na_trans_cytopl
PKD_channel
GPHH
IQ
FixH
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
111237388
NCBI-ProteinID:
XP_022622190
LinkDB
All DBs
Position
Unknown
AA seq
1980 aa
AA seq
DB search
MAGCVFPMGPESFQRFTPDSLAAIEQRIAQEEARRKKHYQEDLGDVELPKPRPDLEAGKQ
LPRIFADIPSHLVGVPLEDIDPYYFKDQRTFIVLNKGKAIFRFSATSALYIFSPFHPVRR
IAIKILVHSLFSLFIMCTILTNCCFMAMSEPAYWAKYLEYTFTGIYTFESLIKILARGFC
VGPFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVRSTAHCVNGSLPANTSFYCNN
KTWASMKDFINDEDNFYKVEGAKDALICGNSSDAGKCPDGFDCLKAGRNPNYGYTSFDTF
GWAFLSLFRLMTQDYWENLYHQTLRSAGKTYMVFFVVVIFLGSFYLVNLILAVVAMAYEE
QNQATIAEAWQKEREFQQAMERLKKEQQVASQKLPDSDSLMSPDLSPFGPALDSLEERRR
SQALMGMSDVEANLSEEKLLQVDMTDGGKPLHPLLARSFSTRTRRSSQVSSIFNFRLRSR
GSEGEMADDEYSVPGDVVEGVGGRTYSGGTFSGILPHPWPKRRPSTYSTASRGSQVFYPT
LNVNGKLFVAMDQNGVSPPPLQGQLPACTMEKVKEESVPTSTTELSTMLLPRPSSTQDSE
RRGRALSAASYLTDAMEELEESNKKCHPCWYVFAHRYLVWECCPWWLRVKQLVKIMVMDP
FLDLAITVCIVLNTLFMAMEHYPMTDEFNGMLSIGNLVFSGIFTAEMVLKIIALDPYYYF
QTGWNIFDSIIVCLSLMELGLSDVEGLSVLRSFRLLRVFKLARSWPTLNTLIKIIGNSMG
ALGNLTLVLAIIVFIFAVVGMQLFGKNYQDCVCKISKDCALPRWHMKDFFHSFLIVFRVL
CGEWIETMWDCMEVAGQPLCILVFMLVMVIGNLVLLNLFLALLLSSFSSDNLSAPDDDGE
MNNLHIAIHRITRGLAWCRRQVMDFFNGNLKRRRQKRKEAKAMMKLKRLSTIHTEVNGAV
IGRHVEKYVVPEEDSYMTNPNLTISVPIAPGESDVEFPEEEDEEEEEGEEEQSEVKANRR
RLSEGSTVDLRKPGEEEDEYSEMAEEAMDPDNCFPDMCVARFHCCDIDTTAGLGQIWWRM
RKTCYQIVEHSWFESFIIFMILLSSGALAFEDIYIEQRKVVKVILEYADKIFTYIFILEM
MLKWLAYGFKKYFTNYWCWLDFLIVDVSLVSLVANTLGYSDFAAIKSLRTLRALRPLRAL
SRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINRTGHIYEAS
FINNKSECEALNDTSLFYWTKVKVNFDNVGAGYLALLQVATFKGWMEIMYAAVDSRAVEE
QPIKEINLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKRKLGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPLNTVQGFFFDLVGKQAFDIIIMVLILFNMITMMVETDEQSPQM
EYILNNVNLAFIIVFTAECLIKIVALRCYFFTVGWNIFDFVVVILSIVGIVLADIIEKYF
VSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
ANFAYVKRQSGIDDMFNFETFGNSMICLFQITTSAGWDSLLSPILNNSPEECNPNIPHTG
TTVKGNCGNPSVGITFFVTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFEMFY
EVWEKFDPEATQFIEYAKLSDFADSLSEPLRIAKPNKIKLISMDLPMVSGDKIHCLDILF
AFTKRVLGESGEMDALKQQMEEKFMMANPSKISYEPITTTLRRKQEEVSATVIQRCYRRH
LVRRQMKAASYLYRQITTPRHAGEDGEEGGEAMFREEAPEKEGLIAAMMRENYGSSLLGM
ERSETISSTSSPPSYDSVTRATSEIFHPLAVNTETVVVDTTGSEQSPSAVDPDRQKETVP
NT seq
5943 nt
NT seq
+upstream
nt +downstream
nt
atggctggctgtgtgtttccaatgggaccagagagctttcagcgcttcacgccggactcc
ctggcggccatcgagcagcgcatcgcccaggaggaggcccgacgcaaaaaacactaccag
gaggacctgggcgacgtggagctccccaagccccggcccgacttggaggcaggaaaacag
ctgccgcgcatcttcgccgacatcccatctcatctggtgggcgttcccctggaagacatc
gacccatactacttcaaagaccagaggaccttcatagtcctgaacaaagggaaggccatc
ttccgtttcagtgccacatcagctctctacatcttcagccctttccaccccgtccgcaga
atcgccatcaagatcctggttcactcgttattcagcttgttcatcatgtgcaccatcctg
accaactgttgcttcatggccatgtcggagccggcgtactgggccaaatacctggagtac
accttcacaggtatctacaccttcgagtcgctcataaagatcctggcgagaggtttctgt
gtggggcccttcaccttcctgagggacccctggaactggctcgacttcagcgtcattgtc
atggcatatgtgactgagtttgtggacctgggtaatgtgtcagccttaaggacgttcagg
gtgctgcgagcgctcaaaaccatctctgtcatcccaggcctgaagaccatcgtcggcgct
ctgattcagtcggtgaagaagctcgccgacgtgatgatcctcaccgtcttctgcctgagc
gtcttcgccctcatcggcctgcagctcttcatgggaaacctgcggcagaagtgcgtccgc
agcacggcacactgcgtcaacggcagcctgcccgccaacacctccttctactgcaacaac
aagacctgggcctccatgaaggacttcatcaacgacgaggacaacttctacaaggtggag
ggagccaaggacgccttaatctgtgggaacagcagcgacgcagggaagtgcccagacggg
tttgactgcctgaaggcgggaaggaaccccaactatggctacaccagcttcgacaccttc
ggctgggccttcctgtccttgttccgcctgatgactcaagactactgggagaacctctac
caccagacgctgcgttcggccggtaagacctacatggtgtttttcgtggtggtgatcttc
ctgggctccttctacctggtcaacctcatcctggccgtggtcgccatggcgtacgaggag
cagaaccaggcgaccatcgcggaggcctggcagaaggagcgcgagttccagcaggccatg
gagaggctcaagaaagagcaacaggtcgcctcccaaaaacttcccgactcagactcgttg
atgtcaccagacctctctccctttggcccggcattggacagcttagaggagcggaggcgg
agtcaagctttgatgggcatgtcggacgtggaggcgaacctatcggaggagaagctgctg
caggtggacatgacggacggcgggaagcccctccaccccctcctcgcccgctccttctcc
acgaggacgcggcgaagcagccaggtctcctccatcttcaacttccgtctgaggagccgg
gggtcagagggggagatggctgacgacgagtacagcgtcccgggcgacgtggtggagggg
gtcgggggccggacctacagcggcgggaccttcagcggcatcctgccccacccgtggccc
aaacgccggccgagcacctacagcacggcgagcaggggctcacaggtgttttatccaact
ctaaacgtcaacgggaagctgtttgttgccatggaccagaacggggtttcaccaccacca
ctgcaggggcagctgcctgcctgcaccatggagaaggtcaaggaggagagtgtccccacg
tccaccacagagctcagtaccatgctgttacctcggccctcgtccacacaggactcggag
cggagggggagggcgctcagtgccgccagctacctcacggacgccatggaagaactggag
gagtccaataagaaatgccacccctgctggtacgtcttcgcccaccgttacctggtgtgg
gagtgctgcccctggtggctgagggtgaaacagctggtgaagatcatggtgatggacccc
ttcctggacctggccatcaccgtctgcatcgtcctcaacacgctcttcatggccatggag
cactaccccatgaccgacgagttcaacggcatgctcagcatcggaaacctggtgttctca
gggatcttcacagcggagatggttctgaagatcatcgctctggatccgtactactacttc
cagacgggctggaacatcttcgacagcatcatcgtctgcctcagcctcatggagctgggc
ctgtctgacgtggaggggctgagcgtgctgcgctccttcagactgctgcgtgttttcaag
ctcgctcgctcatggccgaccctcaacaccctgatcaagatcatcgggaactccatgggc
gctctgggaaacctgacgctcgtcctcgccatcatcgtcttcatcttcgccgtggtcggc
atgcagctgtttggaaagaactaccaggactgtgtgtgtaagatctcgaaggactgcgct
cttcctcgctggcacatgaaggacttcttccactccttcctcatcgtgttcagggttctg
tgcggcgagtggatcgagaccatgtgggactgcatggaggtcgcgggtcagccgctctgc
atcctcgtcttcatgctggtcatggtcatcggaaacctggtgctgttgaacctcttcctg
gctctgctcctcagcagtttcagctctgacaacctgtcggctccagacgacgacggcgag
atgaacaacctgcacatcgccatccacagaatcaccagaggcctggcctggtgccgcaga
caggtgatggatttcttcaacgggaacctgaagcgtcgacgacagaagcgaaaagaggcc
aaagccatgatgaagctgaaacgtctgagtaccatccacactgaggtcaatggagccgtc
ataggccgacatgtggagaagtacgtggtgccggaggaggacagctacatgacgaacccc
aacctgaccatcagcgtccccatcgcccccggagagtcggacgtggagttcccagaggag
gaggacgaggaggaggaggagggggaggaggagcagagcgaggtcaaagcgaacagacgg
cgcctatcagagggcagcacggtggacctgaggaagcccggagaggaagaggatgagtac
tcagagatggccgaagaggccatggaccctgacaactgcttcccagacatgtgtgtggcc
aggtttcactgctgtgacatcgacacgacggcaggactcggtcagatctggtggaggatg
aggaagacgtgttaccagatcgtagagcacagctggttcgagtccttcatcatcttcatg
atcctcctcagctccggagcgctggcctttgaggacatctacatcgagcagaggaaggtg
gtcaaggtgatcctggagtacgcagacaagatcttcacctacatcttcatcctggagatg
atgctcaagtggctcgcctacggcttcaagaagtacttcaccaactactggtgctggctg
gacttcctcatcgtcgatgtctcattggtcagtttggtggccaacacgttgggttattca
gacttcgcagccatcaaatccctgcggacgctgcgggccctgcgtcccctcagggccctg
tccagatttgaaggcatgagggtggtggtcaacgctctgatcggggcgattccctccatc
atgaacgtgctgctggtctgtctcatcttctggctcatcttcagcatcatgggcgtgaac
ttgttcgccgggaagttcggccgctgcatcaaccgcacgggtcacatctacgaggcctcc
ttcatcaacaacaagtccgagtgcgaggcgctcaacgacacctcgctcttctactggacc
aaagtcaaggtcaacttcgacaacgtgggggccggatacctagctctgctgcaagtggcg
acatttaaaggctggatggagatcatgtacgcagccgtggactccagagctgttgaggag
cagccgatcaaggagatcaatctatacatgtacctctactttgtcatcttcatcattttc
ggctccttcttcaccctcaacctcttcatcggcgtcatcatcgacaacttcaaccagcag
aagagaaagttaggaggacaggacatcttcatgacggaggaacagaagaaatactacaac
gccatgaagaaactgggctccaagaaacctcagaagcccatcccccgacctctgaacacg
gtgcagggcttcttcttcgacctggttgggaaacaggcgttcgacatcatcatcatggtg
ctgatcctcttcaacatgatcaccatgatggtggagacggacgagcagtcgcctcagatg
gagtacatcctgaacaacgtcaacctggccttcatcatcgtcttcaccgccgagtgcctc
atcaagatcgtggcgctgcggtgctacttcttcaccgtcggctggaacatcttcgacttc
gtggtcgtcatcctctccatcgtcggtatcgtgcttgccgacatcatcgagaagtacttt
gtgtcgccgaccctcttccgagtgatccgattggctcgtatcggacgtattctgcgtctc
atcagaggtgccaagggcatccggacgttactgttcgccctcatgatgtcccttcctgct
ctcttcaacatcgggctcctcctcttcctggtcatgttcatctacgccatcttcggcatg
gcgaacttcgcctacgtgaagcggcagtcggggatcgacgacatgtttaactttgagacg
tttgggaacagcatgatctgcttgttccagatcaccacctccgccgggtgggacagtctg
ctcagccccatcctcaacaactcccccgaggagtgcaatcccaacatcccccacaccggc
accacggtcaaggggaactgcgggaacccgtcggtgggcatcaccttcttcgtcacttac
atcatcatctccttcctcattgtggtgaacatgtacatcgccatcatcctggagaacttc
agcgtggccacggaggagagcaccgagccgctgagcgaggacgacttcgagatgttctac
gaggtttgggagaagttcgacccggaggccacgcagttcatcgagtacgccaagctgtcc
gactttgccgactcgctgtcggagccgctgcgcatcgccaagccaaacaagatcaagctg
atctccatggacttgcccatggtcagcggggataagatccactgcctggacatcctcttt
gccttcaccaagcgagtcctgggcgagtcgggcgagatggacgccctgaagcagcagatg
gaggagaagttcatgatggccaacccgtccaagatctcctacgagccgatcacgacaacc
ctgaggcgcaaacaggaagaggtctccgccacggtgatccagaggtgctaccgcagacac
ttggtgaggcggcagatgaaggccgcctcctacttgtatcgccagatcaccacgcctcga
catgcaggggaagatggcgaggaaggtggtgaggccatgttcagggaagaagcacctgag
aaagaaggactgatcgccgccatgatgagggaaaactacggctcaagtttgttagggatg
gagcgctctgagacaatttcctccacctcgtctccaccgtcttacgacagcgtgacgcga
gccacctccgaaatctttcatccgctcgctgtcaacacagaaacagtcgtcgttgacact
acgggcagcgaacaatcgccatcagcggtcgaccccgacagacaaaaggaaacggtacca
tag
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integrated database retrieval system
