Seriola dumerili (greater amberjack): 111237782
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Entry
111237782 CDS
T05606
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111237782 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111237782 (exosc2)
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111237782 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111237782 (exosc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
111237782
NCBI-ProteinID:
XP_022622732
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MAADMRLPTIRKPVSISAFDRKDLVVPGDVITSDTGFMRGHGTYVDEDKLTASVAGEVQR
VDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGELRR
RSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIKRQ
KTHFHNLPCGASIILGNNGFVWLYPTPGQQEEEAGGFYTSLEPVNLSDREVISRLRNCLL
ALAAHKVLLYDTSVLYCYESSLQHQVKDILKPEVMEEIVMLTQQKLFEQEG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattaccaactattcgaaaaccagtgtcaatttctgctttcgat
cgaaaagatctggtcgtccccggcgatgttatcacttcagacactggtttcatgaggggt
catggtacctatgttgatgaagacaagctgacggcttcagtcgctggagaggtgcagaga
gtagacaagctgatctgtgtcagaccacttaagaccagattcaatggtgaggttggagat
gtggtggtcggaagaattacagaggtacaacagaaacggtggaaggtggagaccaactcc
cggctggactctgtcctcttgctgtcttccgtcaatctgcctggaggagagctgaggaga
agatcagcagaagatgagctcaccatgagagaataccttcaggagggcgatctcatcagt
gcagaggtgcagtctgtcttctctgatggagccctgtcgcttcacacccgtagtttaaag
tatggaaagttgggtcaaggagtgctggtacagctttccccttctctgatcaagaggcag
aaaacacatttccacaacctgccgtgtggtgcatccatcatcctcgggaataatggtttt
gtgtggttgtatcccacaccgggtcaacaggaggaggaggctggaggcttctacaccagt
ttggagcctgttaacctgtcagaccgagaggtgatttcccgtttgagaaactgtctgctg
gcactggctgcacacaaggtccttttgtatgacaccagtgttctttattgctatgaatct
tcacttcaacatcaggtcaaggacatcttgaaaccagaggtgatggaggagattgtaatg
ttgacgcaacagaagctgtttgaacaggaaggttag
DBGET
integrated database retrieval system
