Seriola dumerili (greater amberjack): 111237793
Help
Entry
111237793 CDS
T05606
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdu03009
]
111237793 (ddx54)
Enzymes [BR:
sdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111237793 (ddx54)
Ribosome biogenesis [BR:
sdu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111237793 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
KH_SLS1_1
Motif
Other DBs
NCBI-GeneID:
111237793
NCBI-ProteinID:
XP_022622744
UniProt:
A0A3B4TJA9
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MAQRKKRMTKKKRHTAGREPEADSDSGDFELAAEIKDDDSPGRKLPRFPTSSDHMSDVEP
DTRELVRAQNKKKKKSGGFQSMGLSYPVYKGVMKKGYKVPTPIQRKTIPVILDGKDIVAM
ARTGSGKTAAFLVPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGRFTGLKTAL
ILGGDRMDDQFAALHENPDIIMGTPGRLMHVITQMNLKLQNVEYVVFDEADRLFEMGFAD
QLQEIIRRLPDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSFFHLR
MDNKPAMLLHLLRNVVKPQEQTVVFVATKHHVEYIKELLSSEGLECAYIYSALDQTARKI
NIGKFVHRKAMVLIVTDVAARGIDIPLLDNVINYNFPPKAKLFLHRVGRVGRAGRSGTAY
SMVCPDEMPFVYDLHLFLGRPVQFATAEHAQDSEGVFGRVPQSILDDEGSHLVTAHENSM
DLENLHRVSENAYKQYLKSRPNPSPESIRRVKNTDLSSMAVHPLLGSGLEKMELERLQIV
DAIKGYKSKSTIFEINSNSKTQASEVMRAKRSKDTRLVDKFSKHREDLAVDSRLHQPVNP
TTADDDDNTGKDEDTLKGVFSAVVGGKRRGLREDEEERSKRSRQTGKDEEYYIPYRPKDF
DSERGLSLSGDGTAFEQQASSAVLDLMGDEGDRLNQHKKIMKWDRKRKRFVTDTGKEDQR
KKIRTDVGQVISKKNKKNFYEEWKKKYKVDDGGSGSDGETGGGRGRGRGGGRGGGGRGGR
KPGGGRGRGRLGPNFQSPVRPQQTAGGRGVRSELKTRDQILKQRKKRDKQQFLQSGGMKN
IRAKKKQWLDEVKKSGFGRGGQKKGKMKKRL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaaagaagagaatgacgaagaagaagagacacacagcgggcagagagccg
gaggctgactcagacagcggggactttgaactggctgctgaaattaaggacgatgattct
ccaggaaggaaactgccgcggttccctacatcatcagaccatatgtcagatgtggagcct
gacaccagggagctggtcagagcccaaaacaagaagaaaaagaagtccggaggctttcaa
tccatgggtctcagttaccctgtatacaaaggggtcatgaaaaaaggttacaaagtccca
actccaatccaaagaaagactatcccagtgattttggatggcaaggatatagtagccatg
gccaggactggcagtggtaagacagctgctttcctggttcctatgtttgagaagctgaag
gcccctcaagcccaaacaggagccagggccctcatcctgacccccaccagagagttggcc
ctgcagaccatgaagttcacaaaagagttgggaagattcactggcctcaagactgccctg
atccttggtggagacagaatggacgatcagtttgctgctcttcacgaaaaccctgacata
atcatgggtacccccggtcgtctcatgcacgtcatcacgcagatgaacctgaagctgcag
aacgtggagtacgtggtgtttgatgaggctgacaggttgtttgaaatgggttttgccgac
cagcttcaggagatcatccggaggcttccggacaccagacagactctgctgttctctgcc
actctgcccaaactgctggtggagttcgccagagctggtctgacagaaccagtgctgatt
cgtttggatgtggattctaagctcagtgaccagattaagctgtcatttttccatctgcgc
atggacaacaagccggcaatgctgcttcatctcctacgaaatgtagtgaagcctcaggag
cagacggtggtttttgtagccaccaagcaccatgtagagtatatcaaggagctgctttct
tcagaaggtttggagtgtgcctacatctacagtgccctcgatcagactgccagaaagatc
aacatagggaagtttgtgcatcggaaagccatggtgctcattgtgactgatgtcgctgct
cgtggtatagacatccccctgctggacaacgtcatcaactacaacttccctcctaaggcc
aagctcttcttgcacagagtcggccgtgtgggacgtgctggtcgcagcggcacagcctac
agtatggtttgtccagatgagatgccttttgtctacgaccttcacctcttcctcggaagg
cctgttcagttcgccacagctgaacacgcacaagattcagagggtgtgttcggccgggtc
cctcagagcatcttggatgacgaaggctctcatctcgtcacggctcacgaaaattccatg
gacctggaaaacctgcatcgcgtctcggagaacgcctacaagcagtacctcaaatcccga
ccaaacccctcaccggagtcaatcagacgggtcaaaaacacagatctgtccagcatggct
gtccatccattactcgggtcaggtttggagaaaatggaactggagcgccttcaaatagtt
gatgccatcaagggttacaaatccaagtcgactatctttgaaatcaactccaacagtaaa
actcaggccagtgaggtgatgcgcgccaaacgctccaaggacacacggttggtggacaag
ttcagcaaacatagagaggacctggctgtagacagccgcctgcatcagcccgtcaacccc
accactgctgacgatgatgacaacacaggcaaggacgaggacactctaaagggggtgttc
tctgcagtggtaggtggaaagagaagaggccttcgggaagatgaggaagaacggtcaaag
agaagcagacagacgggtaaagatgaggagtattacatcccctacagacccaaagacttc
gactctgagagagggttaagtctctccggagacggcactgcttttgagcagcaggcctcc
tctgctgtcctggacctcatgggagatgagggagaccggttgaaccagcacaaaaaaata
atgaaatgggaccgtaagaggaaacgctttgtgacggacacaggaaaggaagaccagagg
aagaagattagaacagatgttggtcaggtcatcagtaagaagaacaagaagaacttttac
gaggagtggaagaaaaaatacaaggtggatgatggaggatctggctcagacggagaaact
ggaggaggaagaggaagaggaagaggaggaggacgaggaggcggaggacgaggagggagg
aagccaggaggaggtcgcggccgtggtcgtctcggccctaacttccagagccccgtgcga
ccgcagcagacggccggcggcagaggagtgcgctccgagctgaagacgcgcgatcagatc
ctgaagcagcgcaagaaaagggacaagcagcagttcctgcagagcggagggatgaagaat
atccgtgccaagaaaaaacagtggctcgacgaagttaagaagtcagggtttggacggggc
ggacaaaagaaaggcaagatgaagaagagactgtga
DBGET
integrated database retrieval system
