Seriola dumerili (greater amberjack): 111237842
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Entry
111237842 CDS
T05606
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04140
Autophagy - animal
sdu04148
Efferocytosis
sdu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111237842 (vps41)
04148 Efferocytosis
111237842 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111237842 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111237842 (vps41)
Membrane trafficking [BR:
sdu04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
111237842 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_HPS5
WD40_WDHD1_1st
zf_RING_Vps8_fungal
Beta-prop_EML_2
TPR_7
Vps39_1
TPR_19
TPR_PEP5_VPS11
zf_RING_Vps8
TPR_GEMI5
TPR_17
Beta-prop_IFT140_2nd
zf-Vps39_C
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
111237842
NCBI-ProteinID:
XP_022622833
UniProt:
A0A3B4U163
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MAEVEEGRKSSEEFTDESEEEDSEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALG
THFGKVYLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFHE
NFDCPIKVVALHPQFTKSNYKQFVTGGNKLLLYEKNWLNRWKTSVLHEGEGSITNIKWRA
NLIAWANNVGVKIYDISTKQRITNVLRDNVSLRPDMYPCSLCWKDNATLIVGWGTSIKIC
VVKERNPTEMRDLPSRYVEITSAFETEFFISGLAPLADQLVTLFFVKENSDHMDEEFRAR
PRLDIIQPLAESCEEISSDALTVRNFQDNECRDYRLEHAEGESLFYIISPKDVVVAKERD
QDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMSYINHLVEKGDYDSAARKCQKV
LGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLRTDYEGFATLIR
EWPGELYNNMAIVQAVTDHLKRDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVYQ
LIHKHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELADRPELLHVYLHKL
FKRDHHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVFLLS
RMGNCRRALQMIMEELEDVDKAIEFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTHV
DPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLQKMHRTQMR
GVRVDEENICESCHATILPSDMAKPFGVVVFHCRHMFHKECLPSPGTIHGVQFCNICSAK
RRGPGSGILEMKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggaagagggcagaaaatcaagtgaggaattcacagatgagtctgaggag
gaggacagcgaggaggagcccaagctgaagtatgagaggctctccaatggggtgaccgaa
atcctccagaaggatgcagccagctgtatgaccgttcatgacaagtttcttgccctaggt
acccattttggaaaggtctacctgctggacatccaaggaaatgtaactcagaagtttgaa
attagttcagtgaagatcaaccagatcagtctggatgaaagtggagagcatgtgggcatc
tgctccgaggatgggaaggttcaagtgttcggcctctacacaagagagggcttccatgag
aactttgactgtcccatcaaagtggtagcgttgcacccgcaattcaccaaatcgaactac
aaacagtttgtcactgggggcaacaagcttcttctgtatgaaaaaaactggttgaatcgc
tggaagacgtctgttcttcatgaaggcgagggctccatcactaatatcaagtggagagct
aatctcatcgcctgggcaaacaacgtgggagttaaaatctatgacatcagcaccaaacag
cggattaccaatgtgctgcgggacaacgtcagtctgaggcctgatatgtacccatgtagc
ctgtgttggaaagacaacgccaccctcattgttggctggggtacttccatcaagatttgt
gtcgtgaaagagcgaaatcctactgagatgagagatctgcccagccgctatgtggaaata
acgtctgcgtttgagactgagtttttcatcagcggcctggcaccactggcggatcagctg
gtcaccttgttcttcgtgaaggagaactctgatcacatggacgaggagtttcgtgcacgg
cctcgtctcgacatcatccagcctctcgccgagagctgtgaggaaatctcctccgacgcg
ctgaccgtgcgcaacttccaggacaacgagtgcagagactatcggctcgagcatgcagag
ggagagtcgctcttctacatcatcagtcccaaagacgttgttgtggccaaggagcgagac
caagatgaccatattgattggctgcttgaaaagaagaaatatgaggaggcactgatggct
gcagagatcagcttcaaaaacattaagagacacgacgttcagaaaatcgggatgtcttac
atcaatcatttagtggagaaaggagactatgacagcgctgcgaggaagtgtcaaaaggtt
cttgggaaaaacatggaactatgggaaaatgaagtctacaggtttaaaaccattggacag
ctgaaggccatcagtcagtatctacccagaggagatctgcgtctcagaccagccatctat
gagatgatcctgcatgaattcctcagaactgattatgagggttttgccacgctgatccgg
gaatggcctggagagctttacaacaacatggccatcgttcaggccgtcacggatcacctg
aagagggatcccactaacagcaccttgctcaccacactggctgaactgtacacctacgac
cagaggtacgacagagccttagaaatctacctgagactgaggcacaaagacgtttaccag
ctgatccacaaacacaacctgttctcatccatagaggacaagatcgtgcttctcatggac
tttgataaagagaaagctgttgacatgctcctcgacaatgaagacaagatatcaacagac
agggtggtcgaagaactcgcagacaggcccgagcttctgcatgtgtatctccataaatta
ttcaagcgagaccaccacaaaggccaaaagtaccatgagaggcagatcggcctgtatgcc
gagtatgatcgaccgaatctcttaccgttcctgagagacagcacacactgcccacttgaa
aaggctcttgagatttgtcagcagaggaactttgtggaggagaccgtcttcctgctcagc
aggatggggaactgcagacgagctctgcagatgatcatggaggagctggaggacgtggac
aaagccatagagttcgctaaagagcaggacgatgcagaactgtgggaggacctcatctct
tactccattgacaaaccaccattcatcactggcctccttaataacatcggtacacatgtg
gatcccatcctgctcatccatcgcataaaggagggcatggagatcccaaacctcagagat
tcacttgtgaaaatccttcaagactacaatctacagattctcttgagggaaggatgtaag
aagatcctggtggccgactctctctccctgctgcagaagatgcaccgtacacagatgaga
ggagtcagggtcgatgaggagaacatttgtgagtcatgtcatgctacaatattaccatca
gacatggccaaacctttcggagtggtggtctttcactgcagacacatgtttcacaaagaa
tgtttaccatctccaggaacaattcatggggtccagttctgtaacatctgcagtgcgaag
aggcgagggcccggaagtggaatacttgagatgaaaaagtaa
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integrated database retrieval system
