Seriola dumerili (greater amberjack): 111237849
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Entry
111237849 CDS
T05606
Symbol
col10a1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
sdu
Seriola dumerili (greater amberjack)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
111237849
NCBI-ProteinID:
XP_022622852
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MDLRVTSVLLVLLALAEATPDRYYHVPKVAKAHYPVKSHVVAGEQGAQGPPGEPGPMGPP
GPPGKSGVGHTGPPGPPGSPGPAGYTQAGKPGSPGGPGKPGTPGIPGDRGAPGSSGPMGP
RGAPGTPGTPGPAGFSSVGKPGPSGIPGSMGPRGEPGLKGHPGIPGLPGSKGERGIGVPG
VQGAPGAVGPMGPSGMPGKPGVGKPGATGYPGEPGKSGMPGRDGAPGPMGMTGPKGHTGA
PGTGAPGKPGQNGTPGMPGPMGAKGPQGPSGQPGSPGMPGVGKTGEPGIPGSRGSPGTPG
TTGQKGEPGPTGYTGQPGAPGPIGPAGPQGARGFQGEGGPTGPKGDIGMVGAPGPRGTKG
DQGAQGFTGKPGVPGAVGPSGIPGHNGPQGPKGSQGHTGAPGIPGSNGAPGLKGHTGTPG
APGKSGESGRPGPMGPAGAPGQSGPPGLKGHPGMPGAPGPAGLTAKGVSGPQGPPGIPGA
RGHDGLPGPAGPPGPPGPPGEVVYHHEKSMPIKSHEVVMSHEMMKAPMSAFSAVLTTAYP
PSGTPIQFAQVLYNGENHYDPHSGVFTCQIPGLYYFSYHIHVNGANALVALYKNEDPVVF
TYDEYNKGFLDQMSGSTVLMLHPGDRVYIQVPDEESNGIFAADNVHCAFSGFLIAST
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggtaaccagcgttctcctcgtcctcctagctttggctgaggcgacccct
gataggtactaccacgtgccaaaagtagccaaggcacactaccccgtcaagagtcatgtt
gttgcaggtgagcaaggtgctcaagggcctccaggtgaaccaggaccaatgggaccacct
ggacctcctggaaagagtggcgtaggacatactggaccaccaggaccaccaggatctcct
ggacctgctggctacactcaagcaggtaaacctggtagcccaggtggccctggaaaacca
ggtacccctggtatccctggtgatagaggtgcacctggctcaagtggaccaatgggtccc
agaggtgcacctggcacacctggaacacctggacctgcaggattctcttctgttggaaaa
cctggaccatctggcattcctggatcaatgggaccaagaggagagcctggcctgaaggga
catcctggtattcctggtcttcctggctccaaaggagagagaggtattggggttcctggg
gttcaaggagcaccaggcgcagtcggaccaatgggtccatctggtatgccaggtaaacct
ggagttggtaaacctggtgccactggctatcctggagaacctggcaagtctggcatgcca
ggaagggatggtgctcctgggccaatgggtatgacagggccaaagggtcacactggggct
ccaggcacaggagcaccaggaaaaccaggccagaatggtacaccaggtatgcctggacct
atgggggctaaaggtccacagggtccatctggtcagccaggctcccctggcatgccaggt
gttggcaaaacaggtgagcctggaataccaggcagcagaggatcccctggtactccagga
accactggtcaaaagggagagccaggtccaactggttatactggtcagccaggcgctcct
ggtcctattggcccagctggtccacagggtgcaagaggattccagggtgagggaggccca
acaggacccaaaggcgacattggtatggtgggtgcaccaggcccaaggggaaccaagggt
gaccagggagctcagggtttcactggaaaaccaggtgtccctggggcagtaggtccttca
ggaattccaggtcacaatggtcctcagggtccaaagggttctcaaggccacaccggtgcc
ccaggaatcccaggttcaaatggcgccccaggactaaaaggacacacaggtaccccagga
gcaccaggaaaaagtggtgagagtggaagaccaggacccatgggaccagctggagcaccc
ggtcaatccggtccccctggacttaagggccacccaggtatgccaggcgcacctggtcca
gctggcttaacagctaagggcgttagtggtcctcagggtccacctggaattccaggtgcc
agaggtcacgatggtcttccaggccctgccggtcctcccggtccacctggcccaccagga
gaggtggtctaccaccatgagaagagcatgccaatcaagtcccacgaggttgtgatgtct
catgagatgatgaaggcccccatgtctgccttcagtgctgtgctgaccaccgcctacccc
ccatctggtactcctattcagttcgctcaggttctgtacaatggggagaaccattatgac
ccccacagtggtgtgttcacctgccagatcccaggcctctactatttcagctatcatatc
catgtcaatggtgctaatgcattggtggccctctacaaaaacgaagacccagttgttttc
acctatgatgagtacaacaagggcttcctggatcagatgtcaggcagtactgttcttatg
ctgcatcccggtgacagagtctatatccaggtccctgatgaggagagtaacggtatattt
gccgcagataatgttcactgcgctttctctgggttcttgattgcctcaacgtga
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