Seriola dumerili (greater amberjack): 111237865
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Entry
111237865 CDS
T05606
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sdu03037
]
111237865 (nphp3)
Cilium and associated proteins [BR:
sdu03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
111237865 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3
NPHP3_hel
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_19
TPR_11
AAA_16
NACHT
KAP_NTPase
TPR_6
ATPase_2
AAA_22
AAA_19
AAA
Macoilin
T2SSE
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
111237865
NCBI-ProteinID:
XP_022622875
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEISSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIQVYDPNDSDSDDNQTTVTAAGTQCEYWTGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCYLIFTQETKAELDVFIKKHSP
VLRKMCEGLGHFYLNICFPEESAASYAVERKQEIEKSSVCVLLLKSTVTSSAVEDCEEAF
VKNPDGHPLVLYLRTDEDHNLTGPTRQLLERVNAADKAAKVKVVDHNGSAEDGADLIYAQ
LEKVIKQELLGLEGAEVDSKDSGIEEGREEDSGDVLWDLHDEQEQIESYQQACSSTTSQL
GFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKQSPNTLFLYHFVGRP
LSTSSEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIIDS
IDQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVRSAVNAE
CQSMDLKLPKDQEKKLERHCRSASTCNALYVTLLARMITSSRSCWLLEKSMEQCLQCQDT
MSLYRLALKMTLNSLNTDRERHIIRELLCLVCASHNGVSESEALDLFPELELPVLSSMLY
CLNRLCIVTLRCGLIRFQHLQAWEAVRLEFLSGGSSSATYREKLIHYFSQQLSQDCVTWR
VADELPWLLQQQEDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMASEYFD
SLKHYEKSCESEDSMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSV
ARSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQNKYE
QAEKLRKRSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDSADCAKTLNELGVLYY
LQNNLDAAKVFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETAEDMYERALDI
RKKALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALVN
LAVIYCQLKKHNDALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELY
KRAMEIKEAEPSLVCGNAPSRHSSSGDTFSLRGPAPLPHTPR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctttggtcagcccaggtgaggtgattgaggatggatatgggggt
gaaggtggggaagcctgcgagatcccggtggaagtcaaacccaaagcccgactcctgcgc
agttcctttcgcagaggacctcgggtgattggggccagtttcaaatccacaggttctgtg
gatcttgaatatgctgccgagtatgaaagactccgtaaagagtatgaaatcttccgtgtc
agcaagaataacgagatatcatccatgcaaaagaaggaagctaaactagatgaagagaac
aagaggctgagagctgagctacaggctctgcagaagacctaccagaaaatccttagagaa
aaagaaagtgctcttgaggcaaagtaccaagctatggagagggctgccacttttgaacat
gacagggacaaagtaaaacgacagtttaagattttccgtgagacaaaagagaaggagatt
caggatcttctgcgggctaaaagggacttggaggccaaactgcaacagttgcaggctcag
ggcatccaagtctatgacccaaatgattctgactcagatgacaaccaaaccactgtcact
gctgctgggacacagtgtgaatactggactggtggtgtgctgggaagtgagccctctatg
ggcagcatgatgcagttgcaacagaccttccgaggacccgagtttgcacacagtttgata
gatgtggagggaccctttgcaaatgtgagcagagatgactgggatgctgcagtggccagt
ctgcttcaggtttcccctcacgtgccccaggccttatggagtaacacagtgcgctgctac
ttaatctttacccaggagaccaaagctgagctggatgtctttattaagaaacactctcct
gtattgcggaagatgtgtgagggtctcggccatttctacctgaatatctgcttcccagag
gaaagtgctgcctcatatgctgtggagcgcaagcaggagattgaaaagagctctgtgtgt
gtgcttcttctcaaatctactgtcactagctctgcggtggaagattgtgaggaagctttt
gtgaagaatccagatggccatccactggtgctctacctcaggactgatgaagatcacaat
ttgactgggcccaccaggcaactgctagaaagggtcaatgctgcagacaaggctgcaaaa
gtcaaggtggtggatcataatggttctgcagaggatggtgctgacctaatatatgctcag
ctggagaaagtcatcaaacaggagttgctgggtcttgaaggagcggaagttgactccaag
gactctgggatagaggaggggcgtgaggaagactctggagatgtgctgtgggacctgcat
gatgaacaggaacagatcgagtcctatcagcaggcttgtagcagcaccacctctcagtta
ggcttccagaagtatattgatcgcttgaatgacatgatagctgctccccctcccacccct
cctctgctggtgtctggtggtcccggctcagggaagtctctcctgctctccaaatggatt
gagctgcaacagaagcagtcccccaacaccttgttcctttatcattttgttggtcgccca
ctttccacaagctcagagccagttctcattatcaaacgcctcacagtcaaactgctgcag
cacttttggtctatttctggcttgtccatggagcccagtaagatcttggaggagtttccc
cgctggcttgagaggctctcagcacgccatcaaggaaacatcatcatcatcattgactcc
attgaccaaatacagcaagcggaaagacacatgaagtggctgatcgaccctctacctgtc
aatgttagagtggtggtgtctgtcaatgttgagacgtgtcctcaagcttggaggttgtgg
cccacactccacttggacccgctgagtccccgagaggtcaggagtgctgtcaatgcagaa
tgccagagcatggatctcaaacttcctaaggaccaggagaagaagctggaaaggcactgt
cgctctgcatcaacctgcaatgcattgtatgtcacactactagccaggatgatcaccagc
agtagatcatgttggttactggagaagagcatggagcagtgtctgcagtgtcaggacacc
atgtcactttaccgcctggcactcaagatgacgctgaactccctcaacacagacagagag
cgacacattattagagagttactgtgccttgtatgtgccagccataatggagtgagtgag
tcagaggcactagaccttttcccagagctagagttacctgtcttgtcctctatgctgtac
tgtctgaacagactctgcattgtaaccctccgttgtgggctcatcaggttccaacacctg
caggcttgggaagctgtgaggttggagttcctgagcggaggaagcagctctgctacttac
agagagaaactcatccattacttcagccaacaactcagccaggactgtgtgacatggcgt
gtcgcagatgaacttccctggctgctccaacagcaggaggacaggactaaactgcagctc
agcctcttgaacctgtttgtctctcagaacctctacaaaaggggccatttctccgagctt
ctggcctactggcagtatgtgggcaaagacaaaagctcgatggccagtgagtactttgac
tccctgaaacactatgagaagagctgtgagagtgaagacagcatgaccaagctggcaaac
ctgtatgagactttgggacgtttcctcaaagacctgggccttccaagtcaggctgtagcc
cctttacaaaggtcccttgagataagggagacagctctggatccggaccatcccagcgtt
gctcgctccctgcaccagctggcaggggtttatgttcagtggaagaagtatggcaacgct
gagcagctgtacaagcaggccctggagataagtgagaacgcctacggtgcagagcacgcc
agcgtggcacgagaactagagtcactcgccatgctctatcagaaacaaaacaaatatgaa
caagcagagaaactcaggaagaggtcagtgaagattcgtcagaaaactgctcgccagaaa
ggtcatatgtatggcttcactttgttgaggcgcagagccctgcagttggaagagctgact
ctgggtaaagattccgctgactgcgccaagacacttaatgaactgggtgtcctgtactac
ctccaaaacaacctggatgcagccaaggtttttttgacccgctctctggagatgcgtcag
cgtgtcctcggtccagatcacccagactgtgctcagtcactcaacaacctggctgcactg
cacactgagaggagggaatatgagacagctgaggatatgtatgagagggcactggacatc
cgcaagaaggccttgtccccagaccacccctcgctggcatacacactcaaacacctggcc
atgctgtataaacgcagagggaagctggagaaggctgtgccactgtacgagctgtctctg
gaaatcagggagaaaagtttcgggcccaaacaccccagtgtggccacagcactggtcaac
ctggctgtaatatactgccaactgaagaagcataatgacgccttgcctctttatgaacga
gccctgaaagtgtatgaggatagtttggggcgctcacatccacgagtcggagagactcta
aaaaacctggctgtgctaagctatgaagaaggtgactttgagaaggcagcggagctttac
aagcgtgcaatggagattaaagaggcagagccatcgctggtgtgtggaaatgccccatcc
cgtcattcctccagtggggacacattcagtctgaggggacctgctcccctcccacacacc
ccaaggtaa
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integrated database retrieval system
