Seriola dumerili (greater amberjack): 111237885
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Entry
111237885 CDS
T05606
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111237885 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sdu01002
]
111237885 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sdu00536
]
111237885 (shh)
Peptidases and inhibitors [BR:
sdu01002
]
Cysteine peptidases
Family C46: hedgehog family
111237885 (shh)
Glycosaminoglycan binding proteins [BR:
sdu00536
]
Heparan sulfate / Heparin
Morphogens
111237885 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Intein_splicing
Peptidase_M15_3
DUF7764
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
111237885
NCBI-ProteinID:
XP_022622906
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MLLWTRIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKRAVKDLQTGDKVLAADEDGNMIYTDFIM
FIDQDSTTKRLFYVIETDSGQKITLTAAHLLFVGHNNHTEKVDKRMSAIFASQVQPGQKV
FVFDPERSRLQPVTVKRIYTQEHDGSFAPVTVQGTVVVDQVLASCYAAIEDHDLAHWALA
PVRLAHWVSSLLFSSQPQASAQNDGVHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgtattggtcggtctcatctgcttgtccttggtgtcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagctgaactcgctggccatctcagtgatgaaccagtggcccggggta
aagctgcgggtcaccgagggctgggacgaggacgggcaccactttgaggagtctcttcac
tacgagggcagggctgtggacatcaccacctcagacagagacaagagcaaatacggcact
ctgtccaggctggcggtggaagccggattcgactgggtctattatgaatccaaagcccac
attcactgctctgtgaaagcagaaaattcagtggcagcaaaatcgggtggctgcttccca
ggctcctccactgtcacccttcaggatggtaccaagagggcggtcaaagacctccaaacc
ggcgacaaggtgctggcagcagatgaggatggaaacatgatttacaccgacttcatcatg
ttcatagaccaagactcgacaactaagaggctcttctacgtcatcgaaaccgactcgggc
cagaaaatcaccctcaccgccgcgcacctcctcttcgtcggccacaacaaccacacggag
aaagtggacaagcggatgtcggcaatcttcgccagccaagtccaacctggacaaaaggtg
ttcgtcttcgaccccgagcggagtcgactccagcctgtgaccgtaaaacggatttacaca
caagagcacgacggctcctttgcgccggtgaccgtgcaggggaccgttgtcgtggaccag
gtccttgcgtcttgttacgcagcgattgaagaccatgacctggcgcactgggccctggca
cctgtcaggctcgcccactgggtgtcctcattgcttttcagttcccagcctcaagccagt
gcacagaacgacggagtgcactggtattccaagatcctttatcaattaggaacatggctc
ttggacagccactcgattcatccacttgggatgtcagtatacccgagttga
DBGET
integrated database retrieval system