KEGG   Seriola dumerili (greater amberjack): 111237885
Entry
111237885         CDS       T05606                                 
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    111237885 (shh)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sdu01002]
    111237885 (shh)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:sdu00536]
    111237885 (shh)
Peptidases and inhibitors [BR:sdu01002]
 Cysteine peptidases
  Family C46: hedgehog family
   111237885 (shh)
Glycosaminoglycan binding proteins [BR:sdu00536]
 Heparan sulfate / Heparin
  Morphogens
   111237885 (shh)
SSDB
Motif
Pfam: HH_signal Hint Intein_splicing Peptidase_M15_3 DUF7764 Vint Ribosomal_S6e
Other DBs
NCBI-GeneID: 111237885
NCBI-ProteinID: XP_022622906
LinkDB
Position
Unknown
AA seq 416 aa
MLLWTRIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKRAVKDLQTGDKVLAADEDGNMIYTDFIM
FIDQDSTTKRLFYVIETDSGQKITLTAAHLLFVGHNNHTEKVDKRMSAIFASQVQPGQKV
FVFDPERSRLQPVTVKRIYTQEHDGSFAPVTVQGTVVVDQVLASCYAAIEDHDLAHWALA
PVRLAHWVSSLLFSSQPQASAQNDGVHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgctgctctggaccagaatcgtattggtcggtctcatctgcttgtccttggtgtcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagctgaactcgctggccatctcagtgatgaaccagtggcccggggta
aagctgcgggtcaccgagggctgggacgaggacgggcaccactttgaggagtctcttcac
tacgagggcagggctgtggacatcaccacctcagacagagacaagagcaaatacggcact
ctgtccaggctggcggtggaagccggattcgactgggtctattatgaatccaaagcccac
attcactgctctgtgaaagcagaaaattcagtggcagcaaaatcgggtggctgcttccca
ggctcctccactgtcacccttcaggatggtaccaagagggcggtcaaagacctccaaacc
ggcgacaaggtgctggcagcagatgaggatggaaacatgatttacaccgacttcatcatg
ttcatagaccaagactcgacaactaagaggctcttctacgtcatcgaaaccgactcgggc
cagaaaatcaccctcaccgccgcgcacctcctcttcgtcggccacaacaaccacacggag
aaagtggacaagcggatgtcggcaatcttcgccagccaagtccaacctggacaaaaggtg
ttcgtcttcgaccccgagcggagtcgactccagcctgtgaccgtaaaacggatttacaca
caagagcacgacggctcctttgcgccggtgaccgtgcaggggaccgttgtcgtggaccag
gtccttgcgtcttgttacgcagcgattgaagaccatgacctggcgcactgggccctggca
cctgtcaggctcgcccactgggtgtcctcattgcttttcagttcccagcctcaagccagt
gcacagaacgacggagtgcactggtattccaagatcctttatcaattaggaacatggctc
ttggacagccactcgattcatccacttgggatgtcagtatacccgagttga

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