Seriola dumerili (greater amberjack): 111237927
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Entry
111237927 CDS
T05606
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111237927 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111237927 (ube3c)
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111237927 (ube3c)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
HECT type E3
111237927 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF3335
Motif
Other DBs
NCBI-GeneID:
111237927
NCBI-ProteinID:
XP_022622966
UniProt:
A0A3B4TUF4
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASKKEEKASLLHRTQEERRKREDERRRLKNAIIIQSYIRGYQ
DLKRQYAIQRARFDECVSQTQAGGAQHVLDGPSLCLLSRQLIFFYRQSVDAHRLIWLCQN
LVKHNSQFVKLLVGPQKQTCMFQIKRILGFCCRLLQNCKDDSLNVAVPMRMLEIFSSERT
YLPVIPDANYVASLLEQILHYMVQKGYYRSLYILVNHRLPSSLEYSDAPSIPLASTLLEH
ILKPLHFTYSSCTTGARQFVFAAFTEEFISAPFTEQIFHFFIPALSDPHLSFPFEAFLSS
LQATIGSSSAAQSQAPWLFYFVLSAGENCLGSLSEEGLLLYLRALQTLLPLLPVSESSTR
PEVSSDSEDEDGAGIHPPPMQDDSRISVQLITEECVHKLDTKHQTNALLNLVWRDSASEE
VFTMMASICHTLMVQHRLMVPKVRLLYSLAFNARFLRHLWYLITSMTTKMITGSMVPLLQ
LISRGSPMSFEDSNRIIPLFYLFSSLFSHSLISVHDSEFFGHEMEGQTQSSMMPFTLSEL
VTLSRCLRDACLGIIKLAYPETKTEHREEYMAAFRSVGVKTNTEVQQRIQAEQKRWVQLF
KVITNLVKMVKARDIRRPFCPAGHWLSEEVNIRADKVTQLYVPSARHVWRTRRMGRIGPL
QSTLDVGSEPPQLSVSEERHLAILTELPFVVPFEERVKIFQRLIYADKRDVQGDGPFPDG
INVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLK
SGFNPNQGFFKTTNEGLLYPSPAAEMLVGDSFTRHYYFLGRILGKALYENMLVELPFASF
FLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEGDVEELGLNFTVVNNDLGEAQVVEL
KLGGKDIPVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGIANVVNLEWLRMFDQQEIQV
LVSGAHVPICLDDLKKFTNYSGGYSATHPVIQTFWEVVEGFTDDEKRKLLKFVTSCSRPP
LLGFKELYPAFCIHNGGSDLERLPTASTCMNLLKLPEFCDQHLMRNKLLYAIESSAGFEL
S
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctttgagggtgatttcaagacaagacccaaggtatcacttggaggagcaagt
aaaaaggaggagaaagcatctctgctgcaccgcactcaagaagaaagaagaaaaagagag
gatgaaagaagacgcctgaagaatgctattatcattcagtcctacatacgtggctaccag
gacttgaaacgacagtatgccatccagagggccaggtttgatgagtgtgtcagccagacg
caggcagggggggctcagcatgtcctggacggtcctagtctctgcctcttatcacgacaa
ctcatttttttttacagacagagtgtggatgcacatagattgatatggttgtgccagaac
ttggtgaaacacaacagtcagtttgtgaagctgttggtgggcccacagaagcagacatgt
atgtttcagatcaagaggatcttaggcttctgctgcagactcctgcagaactgcaaggac
gacagtttaaatgtggcagttcccatgcggatgctagaaatcttttcttcagagagaacc
tatctccctgttattccagatgctaactatgtagcttcattactcgagcagattttgcac
tatatggtacagaaaggatactacaggtcactgtacattcttgtgaaccaccggctccct
tccagtctggagtacagcgacgctccctctatccctctggcaagcacactgttggagcac
atcctcaaacccctgcactttacctactcctcctgcacaacaggcgcaaggcagtttgta
tttgcagcctttacagaggagttcatctcagcaccatttactgagcagatctttcacttc
tttatcccggcactgtcggacccccatctctcattcccgttcgaggcctttctgagctcc
ctccaggccaccatcggctcctcctcagcggcacagagccaggcaccgtggctgttttac
tttgtcctctctgcaggagagaactgcttaggctcactatcagaggagggtctcctgctg
taccttcgggctctgcagacgctgctgcctctgctgccggtgtcggagagcagcaccagg
cctgaggtgagcagcgactcagaggatgaggatggtgctggcatccatccaccacccatg
caggatgacagtcggatatctgttcagctgatcacggaggagtgtgtccacaagctggac
accaagcatcagaccaatgctctgctgaacctggtgtggagggattcagccagcgaggag
gttttcactatgatggcatccatctgccacacacttatggtgcagcatcgcctcatggtg
ccaaaagtcaggcttttgtacagtttagctttcaatgcacgtttcctaaggcatctctgg
tacctgataacgtccatgacaactaaaatgatcactggctccatggtgccgctacttcag
ctgatctcgcgaggttcccccatgtcgtttgaggactccaaccgtatcattcccctcttc
tatctcttcagctccctcttcagccactcacttatctctgtgcatgatagcgagtttttt
gggcatgaaatggaaggtcagacacagtcctccatgatgcccttcacgctgtcagagctg
gtgacactgtctcgctgtctgagagacgcatgtctgggaatcatcaagctggcctacccc
gagaccaaaacagagcacagagaggagtatatggctgccttccgcagcgtgggtgtgaag
accaacactgaggtgcagcagcgtatccaggctgaacagaaacgctgggtacagctcttc
aaggtcatcactaacttggtgaagatggtgaaagctcgcgacattagacgacctttctgt
ccagcaggtcactggctttctgaggaggtcaacatccgagctgataaggtcacccagctg
tacgtcccctctgcaagacacgtgtggagaacgagaaggatgggccgcatcgggccactt
cagtcaacacttgacgtcggctcagagcctccgcagctgtctgtgtccgaagagagacat
ctggccatcctcacagagctccctttcgtggttccctttgaggagcgagtcaagatcttc
cagaggttaatctatgctgacaaacgggacgtgcagggggacgggccgttccctgatggt
atcaatgtcaccatcagacgcaactacatatatgaagacgcctacgataaactttctcca
gaaaacgaaccggacctgaagaaaaggattagagtccatctgctgaatgctcacggtcta
gatgaggcgggcatcgatggcggtggcatctttcgggaattcctcaatgaactcctcaag
tccggcttcaatccaaaccagggtttcttcaagacgaccaatgagggcttgctgtatccc
agccccgctgcagagatgctggtcggagactccttcacaagacactactacttccttggc
aggatccttggaaaggcactgtatgagaacatgttggtggagttgcccttcgccagtttc
ttcctgtctaaacttctgggaaccagtgcagatgtggacatccaccacctggcctcgctg
gacccagagatgtaccgtaaccttctgttcctcaaaagctacgagggtgacgtggaggag
ctgggcctcaacttcactgtggtcaacaatgacctgggagaggctcaggtggttgaactg
aagctgggaggcaaagacattcctgtgaccacagcgaaccggatagcctacatccatttg
gtagctgactacagactgaacaagcagatcaggcctcactgcctggccttcagacagggc
atagcaaatgtggtcaacctggagtggctgcgtatgtttgaccagcaagagatccaggtg
ctggtatctggggctcatgtgccaatttgtcttgatgacctgaaaaagttcacaaactac
tcaggtggttactctgccactcaccccgtcatccagaccttctgggaggtggtcgaaggc
ttcacagatgacgaaaagcgcaagcttctgaagtttgtcaccagctgctccagacctcca
ctgctgggcttcaaggagctgtacccagccttctgcatccacaacggcggcagcgacctg
gagcgtctgcccaccgccagcacctgcatgaacctgctcaagctcccggagttttgcgac
cagcacctgatgaggaacaagctgctgtacgccatcgagtcctccgccgggtttgagttg
agctga
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