KEGG   Seriola dumerili (greater amberjack): 111238038
Entry
111238038         CDS       T05606                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdu03400]
    111238038 (helq)
Enzymes [BR:sdu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     111238038 (helq)
DNA repair and recombination proteins [BR:sdu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    111238038 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DNA_pol_lambd_f TPR_28 DUF7898 Cdd1 DUF4332 ABC-3
Other DBs
NCBI-GeneID: 111238038
NCBI-ProteinID: XP_022623138
UniProt: A0A3B4US88
LinkDB
Position
Unknown
AA seq 1030 aa
MNAGKQEIQIKRVSSKKRSRVSLQTHLTPARKKRGGGTCLQQCPRNRKLSSIMAQIQPAE
YCSSSEDLFGDYDSLLEGSSFLAKLDDAEQSERQRDVQTSPHIVAVDQQDFRTLGLAEEA
VWTWSGEDNLTDSILNGLGDEPFEDMPSSQVQFQEQVDEHVKRSRLQDGGKTSTPSRDTE
GTAEAGTDRNMDDKTKRRSKARRSVTDKLKRTMLGNAAAPSNLSRTVVLKEAVVSEEMSV
AMQAMETVSAETPDLGPFYGLPSKVKDLMHKLRGIQKLYDWQETCLNLDCVQQRKNLIYS
LPTSGGKTLVAEILVLRELLCRKKDCLFILPYISLVQEKVRGLASFGLELDFTVEEYAGS
KGKFPPVRRRNTSSLYIATIEKAHSLVNSLIESGRLENLGLLVVDELHMLGDGSRGAVIE
MTLAKVLYMSRNTQIIGMSATLGNIRDLQTFLKAENYTNDFRPVELKEYVKLNDTIYEVD
PKEEDCFKFSRLLNFKYSSAMQKIDPDHIIALVTEVIPTHSCLVFCPTKKNCENVAGMIC
KYLKEDFLRHKEAEKAVLLRELRDSGNGSLCPVFRRTVPYGLAYHHSGLTTEERKLVEEA
YSNGVLCLLTCTSTLAAGINLPARRVILRSPYVATDFLKRSQYKQMVGRAGRAGIDTVGE
SVLILQDKDRNMAQTLVCAPMENCYSNLLHDEGKGVLSLILSLIGLNITTSSEQLRDFLK
GTLLFVQQTQLCVGRSLWEVVTQCVDLLKEKELITVTSDSQGQTLQVTKLGRATYKGSVD
LTYSDLLYRDLCRGLEGLLLNSYLHLVYLVTPYDMISQVKPDWMIYFRQFTLLSAAEQRM
SAAVGVPESFVARKAAGQTVKNSVTMAVVSRMYLALVLFSLLKETNLWSVADRFQLSRGF
IQTLLSSSSAFCSCVLHFTEELEELWPFKALLTELTRRLSYCVKAELIPLMEVAGVMESR
AKQLYTAGYKTLTHLANADPALLSRTVENLYRKQADQIVASAKMLVNEKAAALQEEVDEL
LMTPLDLPQL
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgaatgctgggaagcaggaaatccaaataaaaagagtttcctcgaagaagaggtcgagg
gtcagcctgcagactcacctgacacctgccaggaagaagagaggagggggaacctgtcta
cagcaatgtcccagaaacaggaagcttagcagcatcatggctcaaatacaacctgctgag
tactgcagcagcagtgaggacttattcggggactatgacagtctcctggagggcagctcc
ttcctggcgaagctggacgatgcagaacaaagtgaaaggcagcgtgacgtccagacttca
cctcacatcgttgctgtggatcagcaggacttcaggactctgggactggccgaggaggcc
gtctggacttggtccggtgaggacaacctcacagactccatcttaaacggactcggagac
gaaccctttgaggacatgccgtccagccaggttcagtttcaggaacaggtggatgaacat
gtgaagaggagccggctgcaggacggagggaaaacctcgacaccttccagagacactgag
gggacagctgaggcggggacggacaggaacatggacgataagacaaagagacgaagcaaa
gcgagaaggagtgtgacggacaagctgaagaggacgatgctcggtaacgctgccgctccc
tcaaatctttctcggaccgtggtgttaaaggaggcagtggtttccgaggagatgagcgtc
gccatgcaggccatggagacggtgtcagctgagacgcccgacctcgggcccttctatgga
ctcccttccaaagtaaaagacctgatgcacaaactgagaggaatccagaagttatatgat
tggcaggagacgtgtctgaacctggactgtgtccagcagaggaagaatctgatctactct
cttcccaccagcggagggaaaactctggtcgcagagatcctcgtcctcagagagctgctg
tgcaggaagaaggactgtctgttcatcttaccttatatatctctggtgcaggagaaggtg
cgggggttggcgagcttcggcctggagctggacttcacggtggaggagtacgccggcagt
aagggcaagttcccgccagtgaggaggaggaacacgagctcgctgtacatcgccaccata
gagaaagctcacagcctggtgaactctctgatagagagcgggcggctggagaacctgggg
ctgctggtggttgatgagcttcacatgctgggagacggcagcagaggggctgttattgaa
atgacgctggctaaagttctgtatatgagcagaaatactcagatcatcgggatgagcgcc
actctgggaaacatcagagacctgcagacatttttaaaggctgagaattacaccaacgac
ttcagacctgtggagctgaaagaatacgtcaaactgaacgacaccatctatgaagtggac
ccaaaggaagaagactgcttcaagttctcacgtctcctcaacttcaagtactccagtgcc
atgcagaagatcgacccggatcacatcatcgctctggtcactgaggtcattccaacacat
tcctgtctggtcttctgtcccaccaagaagaactgtgagaacgtcgcagggatgatctgc
aaatatctgaaagaggacttcctgcggcacaaggaggcggagaaggccgtcctcctcaga
gagctgcgggacagcgggaacggctcgctgtgtccagtgttcaggaggacggtgccgtat
ggtctggcctatcaccacagcggactgaccacggaggagaggaagctggtggaggaggcc
tactccaacggggtcctctgtctcctcacctgtacatccaccctcgccgcagggatcaac
ctacctgcccgcagagtcatcctgcggtctccgtacgtggccacagacttcctgaagagg
agtcagtacaaacagatggtggggcgggccgggcgagccgggatcgacactgtgggagag
agtgtcctcatcctgcaggacaaggacaggaacatggctcagactcttgtgtgtgcgccg
atggagaactgctacagtaacctgctgcatgacgaggggaaaggcgtcctgagtctcatc
ctgtctctgattggactgaatatcaccacctcgtccgagcagctgagggacttcctgaag
gggacgctgctgttcgtgcagcagacacagctgtgtgtggggaggagcctgtgggaggtg
gtgacgcagtgtgtcgacctcctgaaggagaaggagctcatcactgtgacctccgactca
cagggtcaaacgctgcaggtcaccaagctgggaagagccacctacaaaggctcggtggat
ctgacctacagtgacctcctgtacagagacctgtgcaggggtctggagggtctgctgctc
aacagttacctccacctggtgtacctggtcaccccgtacgacatgatctctcaggtcaaa
cccgactggatgatttacttcagacagttcacgctgctgtcggccgcggagcagaggatg
tctgcggccgtcggcgtccccgagagtttcgttgcgagaaaagctgcaggacagacggtg
aagaacagcgtgaccatggcggtggtcagcaggatgtatctggctctggtcctgttctcg
ctgctgaaggaaacgaacctgtggagcgtggccgaccggttccagctgagccgaggattc
atccagactctgctcagctcctcctcggctttctgctcctgcgtgctgcacttcacagag
gagctggaggagctctggccctttaaggctctgctgacggagctgacgcggaggctgagc
tactgtgtgaaggcggagctcatccctctgatggaggtggccggagtcatggagtcccga
gccaagcagctctacaccgccggctacaagacgctgactcacctggccaacgccgacccc
gcactcctgtccaggaccgtggaaaacctgtacaggaaacaggccgaccagatcgtggcc
tcggctaaaatgctggtgaatgagaaggcggcggctcttcaggaggaagtggacgagctg
ctgatgacgccgttggaccttcctcagctgtga

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